RNA–Protein interactions for RNA: ENST00000396865.6

SLC38A9-202, Transcript of solute carrier family 38 member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A9, Length 2,927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-202ENST00000396865 DISP1Q96F81 1524 aa19.17■□□□□ 0.66
SLC38A9-202ENST00000396865 FRAT2O75474 233 aaPredicted RBP19.16■□□□□ 0.66
SLC38A9-202ENST00000396865 ROCK2O75116 1388 aaKnown RBP19.16■□□□□ 0.66
SLC38A9-202ENST00000396865 CC2D1BQ5T0F9 858 aaKnown RBP19.16■□□□□ 0.66
SLC38A9-202ENST00000396865 ARID4BQ4LE39 1312 aaPredicted RBP19.16■□□□□ 0.66
SLC38A9-202ENST00000396865 NLRP13Q86W25 1043 aa19.14■□□□□ 0.66
SLC38A9-202ENST00000396865 PDE3BQ13370 1112 aa19.14■□□□□ 0.65
SLC38A9-202ENST00000396865 ROCK1Q13464 1354 aa19.13■□□□□ 0.65
SLC38A9-202ENST00000396865 DCAF11Q8TEB1 546 aa19.13■□□□□ 0.65
SLC38A9-202ENST00000396865 UBE2Q2Q8WVN8 375 aa19.13■□□□□ 0.65
SLC38A9-202ENST00000396865 NUP160Q12769 1436 aa19.13■□□□□ 0.65
SLC38A9-202ENST00000396865 KIAA0556O60303 1618 aa19.13■□□□□ 0.65
SLC38A9-202ENST00000396865 RGS3P49796 1198 aa19.13■□□□□ 0.65
SLC38A9-202ENST00000396865 PZPP20742 1482 aa19.11■□□□□ 0.65
SLC38A9-202ENST00000396865 JPH4Q96JJ6 628 aa19.11■□□□□ 0.65
SLC38A9-202ENST00000396865 CHD1O14646 1710 aa19.1■□□□□ 0.65
SLC38A9-202ENST00000396865 KDM5CP41229 1560 aa19.09■□□□□ 0.65
SLC38A9-202ENST00000396865 KTN1Q86UP2 1357 aaKnown RBP19.09■□□□□ 0.65
SLC38A9-202ENST00000396865 KIAA1107Q9UPP5 1409 aa19.08■□□□□ 0.65
SLC38A9-202ENST00000396865 MBD5Q9P267 1494 aa19.08■□□□□ 0.64
SLC38A9-202ENST00000396865 CFDP1Q9UEE9 299 aaPredicted RBP19.07■□□□□ 0.64
SLC38A9-202ENST00000396865 FAM161AQ3B820 660 aa19.05■□□□□ 0.64
SLC38A9-202ENST00000396865 C8orf34Q49A92 452 aa19.04■□□□□ 0.64
SLC38A9-202ENST00000396865 ARXQ96QS3 562 aa19.04■□□□□ 0.64
SLC38A9-202ENST00000396865 CENPQQ7L2Z9 268 aaPredicted RBP19.01■□□□□ 0.63
SLC38A9-202ENST00000396865 NUP155O75694 1391 aa19.01■□□□□ 0.63
SLC38A9-202ENST00000396865 KIF14Q15058 1648 aa19.01■□□□□ 0.63
SLC38A9-202ENST00000396865 RGL3Q3MIN7 710 aa19.01■□□□□ 0.63
SLC38A9-202ENST00000396865 KDM2BQ8NHM5 1336 aa19.01■□□□□ 0.63
SLC38A9-202ENST00000396865 PLB1Q6P1J6 1458 aa19.01■□□□□ 0.63
SLC38A9-202ENST00000396865 DNMT1P26358 1616 aaKnown RBP19■□□□□ 0.63
SLC38A9-202ENST00000396865 PARD3Q8TEW0 1356 aa18.99■□□□□ 0.63
SLC38A9-202ENST00000396865 RALGAPBQ86X10 1494 aa18.99■□□□□ 0.63
SLC38A9-202ENST00000396865 NUP153P49790 1475 aaKnown RBP18.98■□□□□ 0.63
SLC38A9-202ENST00000396865 ADAMTS8Q9UP79 889 aa18.98■□□□□ 0.63
SLC38A9-202ENST00000396865 PER1O15534 1290 aaPredicted RBP18.97■□□□□ 0.63
SLC38A9-202ENST00000396865 NBPF1Q3BBV0 1214 aa18.97■□□□□ 0.63
SLC38A9-202ENST00000396865 PANK3Q9H999 370 aa18.97■□□□□ 0.63
SLC38A9-202ENST00000396865 POGKQ9P215 609 aa18.97■□□□□ 0.63
SLC38A9-202ENST00000396865 RAPGEF6Q8TEU7 1601 aa18.96■□□□□ 0.63
SLC38A9-202ENST00000396865 CARMIL2Q6F5E8 1435 aa18.96■□□□□ 0.63
SLC38A9-202ENST00000396865 PRG4Q92954 1404 aaPredicted RBP18.96■□□□□ 0.63
SLC38A9-202ENST00000396865 SLKQ9H2G2 1235 aaPredicted RBP18.96■□□□□ 0.63
SLC38A9-202ENST00000396865 FAM43AQ8N2R8 423 aa18.95■□□□□ 0.62
SLC38A9-202ENST00000396865 RSPH6AQ9H0K4 717 aa18.95■□□□□ 0.62
SLC38A9-202ENST00000396865 UHRF1BP1Q6BDS2 1440 aa18.94■□□□□ 0.62
SLC38A9-202ENST00000396865 ANKRD50Q9ULJ7 1429 aa18.92■□□□□ 0.62
SLC38A9-202ENST00000396865 ANKRD30AQ9BXX3 1397 aa18.92■□□□□ 0.62
SLC38A9-202ENST00000396865 CAMSAP2Q08AD1 1489 aa18.91■□□□□ 0.62
SLC38A9-202ENST00000396865 ERCC6L2Q5T890 1561 aa18.91■□□□□ 0.62
SLC38A9-202ENST00000396865 DUSP27Q5VZP5 1158 aa18.9■□□□□ 0.62
SLC38A9-202ENST00000396865 WDR43Q15061 677 aaKnown RBP eCLIP18.89■□□□□ 0.61
SLC38A9-202ENST00000396865 SEC24BO95487 1268 aa18.87■□□□□ 0.61
SLC38A9-202ENST00000396865 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.87■□□□□ 0.61
SLC38A9-202ENST00000396865 RRAGDQ9NQL2 400 aaPredicted RBP18.87■□□□□ 0.61
SLC38A9-202ENST00000396865 PLEKHH1Q9ULM0 1364 aa18.87■□□□□ 0.61
SLC38A9-202ENST00000396865 CCDC146Q8IYE0 955 aa18.87■□□□□ 0.61
SLC38A9-202ENST00000396865 BLMP54132 1417 aaPredicted RBP18.87■□□□□ 0.61
SLC38A9-202ENST00000396865 DISP3Q9P2K9 1392 aa18.86■□□□□ 0.61
SLC38A9-202ENST00000396865 GOLGA2Q08379 1002 aa18.86■□□□□ 0.61
SLC38A9-202ENST00000396865 BCAR3O75815 825 aa18.85■□□□□ 0.61
SLC38A9-202ENST00000396865 SPRYD3Q8NCJ5 442 aa18.84■□□□□ 0.61
SLC38A9-202ENST00000396865 IGHDP01880 384 aa18.84■□□□□ 0.61
SLC38A9-202ENST00000396865 PTPRGP23470 1445 aa18.83■□□□□ 0.61
SLC38A9-202ENST00000396865 ABCA8O94911 1581 aa18.82■□□□□ 0.6
SLC38A9-202ENST00000396865 TSPY4P0CV99 314 aa18.82■□□□□ 0.6
SLC38A9-202ENST00000396865 TSPY10P0CW01 314 aa18.82■□□□□ 0.6
SLC38A9-202ENST00000396865 SHROOM2Q13796 1616 aa18.82■□□□□ 0.6
SLC38A9-202ENST00000396865 GZF1Q9H116 711 aaPredicted RBP18.81■□□□□ 0.6
SLC38A9-202ENST00000396865 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.81■□□□□ 0.6
SLC38A9-202ENST00000396865 ZMYM4Q5VZL5 1548 aa18.81■□□□□ 0.6
SLC38A9-202ENST00000396865 SPINK5Q9NQ38 1064 aaPredicted RBP18.8■□□□□ 0.6
SLC38A9-202ENST00000396865 TESK2Q96S53 571 aa18.8■□□□□ 0.6
SLC38A9-202ENST00000396865 E9PCH4 1651 aa18.8■□□□□ 0.6
SLC38A9-202ENST00000396865 USP19O94966 1318 aa18.8■□□□□ 0.6
SLC38A9-202ENST00000396865 GPATCH8Q9UKJ3 1502 aaKnown RBP18.8■□□□□ 0.6
SLC38A9-202ENST00000396865 HNRNPMP52272 730 aaKnown RBP eCLIP18.79■□□□□ 0.6
SLC38A9-202ENST00000396865 TMF1P82094 1093 aa18.79■□□□□ 0.6
SLC38A9-202ENST00000396865 BECN1Q14457 450 aa18.79■□□□□ 0.6
SLC38A9-202ENST00000396865 ARHGEF12Q9NZN5 1544 aa18.79■□□□□ 0.6
SLC38A9-202ENST00000396865 KNSTRNQ9Y448 316 aa18.78■□□□□ 0.6
SLC38A9-202ENST00000396865 CLASP1Q7Z460 1538 aa18.78■□□□□ 0.6
SLC38A9-202ENST00000396865 PPP2R1AP30153 589 aa18.78■□□□□ 0.6
SLC38A9-202ENST00000396865 NAP1L5Q96NT1 182 aaPredicted RBP18.78■□□□□ 0.6
SLC38A9-202ENST00000396865 ATP10BO94823 1461 aa18.78■□□□□ 0.6
SLC38A9-202ENST00000396865 CANXP27824 592 aaKnown RBP18.77■□□□□ 0.6
SLC38A9-202ENST00000396865 TROQ12816 1431 aaPredicted RBP18.76■□□□□ 0.59
SLC38A9-202ENST00000396865 SLFN5Q08AF3 891 aa18.76■□□□□ 0.59
SLC38A9-202ENST00000396865 APAF1O14727 1248 aa18.76■□□□□ 0.59
SLC38A9-202ENST00000396865 L1TD1Q5T7N2 865 aaKnown RBP18.75■□□□□ 0.59
SLC38A9-202ENST00000396865 COG6Q9Y2V7 657 aa18.75■□□□□ 0.59
SLC38A9-202ENST00000396865 PRAG1Q86YV5 1406 aa18.74■□□□□ 0.59
SLC38A9-202ENST00000396865 PANK1Q8TE04 598 aa18.74■□□□□ 0.59
SLC38A9-202ENST00000396865 ADGRL2O95490 1459 aa18.74■□□□□ 0.59
SLC38A9-202ENST00000396865 PLEKHH2Q8IVE3 1493 aa18.74■□□□□ 0.59
SLC38A9-202ENST00000396865 C9orf84Q5VXU9 1444 aa18.74■□□□□ 0.59
SLC38A9-202ENST00000396865 PANK2Q9BZ23 570 aa18.73■□□□□ 0.59
SLC38A9-202ENST00000396865 CCDC144AA2RUR9 1427 aa18.72■□□□□ 0.59
SLC38A9-202ENST00000396865 ERBINQ96RT1 1412 aa18.72■□□□□ 0.59
SLC38A9-202ENST00000396865 ADGBQ8N7X0 1667 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms