RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 PPP4R3BQ5MIZ7 849 aa9.9□□□□□ -0.82
CMC1-202ENST00000396610 ANKRD13DQ6ZTN6 518 aa9.9□□□□□ -0.82
CMC1-202ENST00000396610 RBM33Q96EV2 1170 aaKnown RBP9.9□□□□□ -0.82
CMC1-202ENST00000396610 EPAS1Q99814 870 aa9.9□□□□□ -0.82
CMC1-202ENST00000396610 PSDA5PKW4 1024 aaPredicted RBP9.89□□□□□ -0.83
CMC1-202ENST00000396610 ZDHHC16Q969W1 377 aa9.89□□□□□ -0.83
CMC1-202ENST00000396610 MAP3K7O43318 606 aa9.88□□□□□ -0.83
CMC1-202ENST00000396610 LSM11P83369 360 aaKnown RBP eCLIP9.88□□□□□ -0.83
CMC1-202ENST00000396610 FBXW7Q969H0 707 aa9.88□□□□□ -0.83
CMC1-202ENST00000396610 ADAM33Q9BZ11 813 aa9.88□□□□□ -0.83
CMC1-202ENST00000396610 CDHR5Q9HBB8 845 aa9.87□□□□□ -0.83
CMC1-202ENST00000396610 TSR1Q2NL82 804 aaKnown RBP9.86□□□□□ -0.83
CMC1-202ENST00000396610 GPIHBP1Q8IV16 184 aa9.85□□□□□ -0.83
CMC1-202ENST00000396610 NUTM2FA1L443 756 aa9.84□□□□□ -0.83
CMC1-202ENST00000396610 BCL2L12Q9HB09 334 aa9.83□□□□□ -0.84
CMC1-202ENST00000396610 GPR37O15354 613 aa9.82□□□□□ -0.84
CMC1-202ENST00000396610 C6orf132Q5T0Z8 1188 aa9.81□□□□□ -0.84
CMC1-202ENST00000396610 TPRNQ4KMQ1 711 aa9.8□□□□□ -0.84
CMC1-202ENST00000396610 KCNK17Q96T54 332 aa9.8□□□□□ -0.84
CMC1-202ENST00000396610 POTEEQ6S8J3 1075 aa9.79□□□□□ -0.84
CMC1-202ENST00000396610 PTPREP23469 700 aa9.78□□□□□ -0.84
CMC1-202ENST00000396610 ZC3H15Q8WU90 426 aaKnown RBP9.78□□□□□ -0.84
CMC1-202ENST00000396610 ARHGAP33O14559 1287 aa9.77□□□□□ -0.85
CMC1-202ENST00000396610 COL9A1P20849 921 aa9.77□□□□□ -0.85
CMC1-202ENST00000396610 PSEN2P49810 448 aa9.77□□□□□ -0.85
CMC1-202ENST00000396610 PTGDRQ13258 359 aa9.77□□□□□ -0.85
CMC1-202ENST00000396610 NPDC1Q9NQX5 325 aaPredicted RBP9.77□□□□□ -0.85
CMC1-202ENST00000396610 AXIN2Q9Y2T1 843 aa9.77□□□□□ -0.85
CMC1-202ENST00000396610 FCHSD2O94868 740 aa9.76□□□□□ -0.85
CMC1-202ENST00000396610 PPP1R3GB7ZBB8 358 aa9.75□□□□□ -0.85
CMC1-202ENST00000396610 PRKCSHP14314 528 aaPredicted RBP9.74□□□□□ -0.85
CMC1-202ENST00000396610 KCNH8Q96L42 1107 aa9.74□□□□□ -0.85
CMC1-202ENST00000396610 HIC1Q14526 733 aa9.73□□□□□ -0.85
CMC1-202ENST00000396610 DMRTA1Q5VZB9 504 aa9.73□□□□□ -0.85
CMC1-202ENST00000396610 GNPATO15228 680 aa9.72□□□□□ -0.85
CMC1-202ENST00000396610 ADGRD1Q6QNK2 874 aa9.72□□□□□ -0.85
CMC1-202ENST00000396610 TK2O00142 265 aa9.71□□□□□ -0.86
CMC1-202ENST00000396610 ZMYND10O75800 440 aa9.71□□□□□ -0.86
CMC1-202ENST00000396610 FECHP22830 423 aa9.71□□□□□ -0.86
CMC1-202ENST00000396610 PADI6Q6TGC4 694 aa9.71□□□□□ -0.86
CMC1-202ENST00000396610 CERKQ8TCT0 537 aa9.71□□□□□ -0.86
CMC1-202ENST00000396610 PROX2Q3B8N5 592 aa9.7□□□□□ -0.86
CMC1-202ENST00000396610 HCSTQ9UBK5 93 aa9.7□□□□□ -0.86
CMC1-202ENST00000396610 CDCA7LQ96GN5 454 aa9.69□□□□□ -0.86
CMC1-202ENST00000396610 ZBED2Q9BTP6 218 aa9.69□□□□□ -0.86
CMC1-202ENST00000396610 PRSS12P56730 875 aa9.68□□□□□ -0.86
CMC1-202ENST00000396610 BARGINQ6ZT62 677 aa9.68□□□□□ -0.86
CMC1-202ENST00000396610 RBM27Q9P2N5 1060 aaKnown RBP9.68□□□□□ -0.86
CMC1-202ENST00000396610 FAM198AQ9UFP1 575 aa9.67□□□□□ -0.86
CMC1-202ENST00000396610 TRIM6-TRIM34B2RNG4 842 aa9.66□□□□□ -0.86
CMC1-202ENST00000396610 MAP2K5Q13163 448 aa9.66□□□□□ -0.86
CMC1-202ENST00000396610 TTC13Q8NBP0 860 aa9.66□□□□□ -0.86
CMC1-202ENST00000396610 TSKSQ9UJT2 592 aa9.66□□□□□ -0.86
CMC1-202ENST00000396610 STAC3Q96MF2 364 aa9.65□□□□□ -0.86
CMC1-202ENST00000396610 FAM161AQ3B820 660 aa9.64□□□□□ -0.87
CMC1-202ENST00000396610 C3orf80F5H4A9 247 aa9.63□□□□□ -0.87
CMC1-202ENST00000396610 HRO43593 1189 aa9.63□□□□□ -0.87
CMC1-202ENST00000396610 CCDC102AQ96A19 550 aa9.63□□□□□ -0.87
CMC1-202ENST00000396610 SLC4A5Q9BY07 1137 aa9.63□□□□□ -0.87
CMC1-202ENST00000396610 SLC24A3Q9HC58 644 aa9.63□□□□□ -0.87
CMC1-202ENST00000396610 VPS9D1Q9Y2B5 631 aa9.63□□□□□ -0.87
CMC1-202ENST00000396610 KRI1Q8N9T8 703 aaKnown RBP9.62□□□□□ -0.87
CMC1-202ENST00000396610 PLA2G2EQ9NZK7 142 aa9.62□□□□□ -0.87
CMC1-202ENST00000396610 ADGRG1Q9Y653 693 aa9.61□□□□□ -0.87
CMC1-202ENST00000396610 NBPF26B4DH59 902 aa9.6□□□□□ -0.87
CMC1-202ENST00000396610 KIAA1468Q9P260 1216 aa9.6□□□□□ -0.87
CMC1-202ENST00000396610 MINK1Q8N4C8 1332 aaPredicted RBP9.59□□□□□ -0.87
CMC1-202ENST00000396610 IRF6O14896 467 aa9.59□□□□□ -0.87
CMC1-202ENST00000396610 RABGEF1Q9UJ41 708 aa9.59□□□□□ -0.87
CMC1-202ENST00000396610 SMAPO00193 183 aa9.58□□□□□ -0.88
CMC1-202ENST00000396610 ONECUT3O60422 494 aaPredicted RBP9.58□□□□□ -0.88
CMC1-202ENST00000396610 NUDT18Q6ZVK8 323 aa9.58□□□□□ -0.88
CMC1-202ENST00000396610 PACS2Q86VP3 889 aa9.58□□□□□ -0.88
CMC1-202ENST00000396610 SEPT9Q9UHD8 586 aaPredicted RBP9.58□□□□□ -0.88
CMC1-202ENST00000396610 PNMA3Q9UL41 463 aa9.58□□□□□ -0.88
CMC1-202ENST00000396610 METTL3Q86U44 580 aaKnown RBP9.56□□□□□ -0.88
CMC1-202ENST00000396610 TATDN2Q93075 761 aa9.56□□□□□ -0.88
CMC1-202ENST00000396610 PXYLP1Q8TE99 480 aa9.55□□□□□ -0.88
CMC1-202ENST00000396610 NLRP7Q8WX94 980 aa9.55□□□□□ -0.88
CMC1-202ENST00000396610 KCTD12Q96CX2 325 aaKnown RBP9.55□□□□□ -0.88
CMC1-202ENST00000396610 AK7Q96M32 723 aa9.55□□□□□ -0.88
CMC1-202ENST00000396610 PHOX2BQ99453 314 aa9.55□□□□□ -0.88
CMC1-202ENST00000396610 NBPF3Q9H094 633 aa9.55□□□□□ -0.88
CMC1-202ENST00000396610 RBM46Q8TBY0 533 aaKnown RBP9.54□□□□□ -0.88
CMC1-202ENST00000396610 EYA1Q99502 592 aa9.54□□□□□ -0.88
CMC1-202ENST00000396610 BHMG1C9JSJ3 638 aaPredicted RBP9.53□□□□□ -0.88
CMC1-202ENST00000396610 TRIM66O15016 1216 aa9.53□□□□□ -0.88
CMC1-202ENST00000396610 OATP04181 439 aa9.53□□□□□ -0.88
CMC1-202ENST00000396610 MRPL50Q8N5N7 158 aaKnown RBP9.51□□□□□ -0.89
CMC1-202ENST00000396610 RCCD1A6NED2 376 aa9.5□□□□□ -0.89
CMC1-202ENST00000396610 FAM98CQ17RN3 349 aaKnown RBP9.5□□□□□ -0.89
CMC1-202ENST00000396610 DNAJB2P25686 324 aa9.49□□□□□ -0.89
CMC1-202ENST00000396610 AMHR2Q16671 573 aa9.49□□□□□ -0.89
CMC1-202ENST00000396610 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.48□□□□□ -0.89
CMC1-202ENST00000396610 MDM2Q00987 491 aaPredicted RBP9.48□□□□□ -0.89
CMC1-202ENST00000396610 PDE4DQ08499 809 aa9.48□□□□□ -0.89
CMC1-202ENST00000396610 LAPTM4BQ86VI4 370 aa9.48□□□□□ -0.89
CMC1-202ENST00000396610 GOLGA8CPA6NN73 597 aa9.47□□□□□ -0.89
CMC1-202ENST00000396610 TMEM134Q9H6X4 195 aa9.47□□□□□ -0.89
CMC1-202ENST00000396610 TTLL12Q14166 644 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms