RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 ARHGEF5Q12774 1597 aa14.52□□□□□ -0.08
TUBB-208ENST00000396389 ZFYVE16Q7Z3T8 1539 aa14.52□□□□□ -0.09
TUBB-208ENST00000396389 ROCK1Q13464 1354 aa14.52□□□□□ -0.09
TUBB-208ENST00000396389 MPHOSPH9Q99550 1183 aa14.52□□□□□ -0.09
TUBB-208ENST00000396389 PKD2Q13563 968 aa14.5□□□□□ -0.09
TUBB-208ENST00000396389 DHX57Q6P158 1386 aaKnown RBP14.49□□□□□ -0.09
TUBB-208ENST00000396389 FRMPD1Q5SYB0 1578 aa14.49□□□□□ -0.09
TUBB-208ENST00000396389 SHANK2Q9UPX8 1470 aa14.48□□□□□ -0.09
TUBB-208ENST00000396389 CFAP74Q9C0B2 1584 aa14.48□□□□□ -0.09
TUBB-208ENST00000396389 WASHC2CQ9Y4E1 1318 aa14.48□□□□□ -0.09
TUBB-208ENST00000396389 CROCC2H7BZ55 1655 aa14.47□□□□□ -0.09
TUBB-208ENST00000396389 DHX29Q7Z478 1369 aaKnown RBP14.47□□□□□ -0.09
TUBB-208ENST00000396389 A2MP01023 1474 aa14.47□□□□□ -0.09
TUBB-208ENST00000396389 KIDINS220Q9ULH0 1771 aa14.47□□□□□ -0.09
TUBB-208ENST00000396389 ADGRL2O95490 1459 aa14.47□□□□□ -0.09
TUBB-208ENST00000396389 HECW2Q9P2P5 1572 aa14.45□□□□□ -0.1
TUBB-208ENST00000396389 MSH5O43196 834 aa14.45□□□□□ -0.1
TUBB-208ENST00000396389 MLH3Q9UHC1 1453 aa14.45□□□□□ -0.1
TUBB-208ENST00000396389 RICTORQ6R327 1708 aa14.45□□□□□ -0.1
TUBB-208ENST00000396389 ABCA6Q8N139 1617 aa14.44□□□□□ -0.1
TUBB-208ENST00000396389 RTEL1-TNFRSF6BF6WH68 1400 aa14.44□□□□□ -0.1
TUBB-208ENST00000396389 DDX10Q13206 875 aaKnown RBP14.44□□□□□ -0.1
TUBB-208ENST00000396389 KDM5CP41229 1560 aa14.44□□□□□ -0.1
TUBB-208ENST00000396389 CEBPAP49715 358 aaPredicted RBP14.44□□□□□ -0.1
TUBB-208ENST00000396389 ESF1Q9H501 851 aaKnown RBP14.44□□□□□ -0.1
TUBB-208ENST00000396389 HIRIP3Q9BW71 556 aaPredicted RBP14.43□□□□□ -0.1
TUBB-208ENST00000396389 INO80Q9ULG1 1556 aaPredicted RBP14.43□□□□□ -0.1
TUBB-208ENST00000396389 EIF5BO60841 1220 aaKnown RBP14.42□□□□□ -0.1
TUBB-208ENST00000396389 DUOX2Q9NRD8 1548 aa14.42□□□□□ -0.1
TUBB-208ENST00000396389 ADGBQ8N7X0 1667 aa14.41□□□□□ -0.1
TUBB-208ENST00000396389 DIP2CQ9Y2E4 1556 aa14.41□□□□□ -0.1
TUBB-208ENST00000396389 RGL3Q3MIN7 710 aa14.41□□□□□ -0.1
TUBB-208ENST00000396389 FBXO31Q5XUX0 539 aaPredicted RBP14.41□□□□□ -0.1
TUBB-208ENST00000396389 CHGAP10645 457 aaKnown RBP14.4□□□□□ -0.1
TUBB-208ENST00000396389 ATP10AO60312 1499 aa14.4□□□□□ -0.1
TUBB-208ENST00000396389 ZNF326Q5BKZ1 582 aaKnown RBP14.38□□□□□ -0.11
TUBB-208ENST00000396389 MAST1Q9Y2H9 1570 aa14.38□□□□□ -0.11
TUBB-208ENST00000396389 ERBINQ96RT1 1412 aa14.38□□□□□ -0.11
TUBB-208ENST00000396389 GCC2Q8IWJ2 1684 aa14.37□□□□□ -0.11
TUBB-208ENST00000396389 KANK1Q14678 1352 aa14.37□□□□□ -0.11
TUBB-208ENST00000396389 PZPP20742 1482 aa14.37□□□□□ -0.11
TUBB-208ENST00000396389 PLXNC1O60486 1568 aa14.37□□□□□ -0.11
TUBB-208ENST00000396389 NUTM2DQ5VT03 806 aaPredicted RBP14.36□□□□□ -0.11
TUBB-208ENST00000396389 SIGLEC1Q9BZZ2 1709 aa14.36□□□□□ -0.11
TUBB-208ENST00000396389 NEFLP07196 543 aa14.35□□□□□ -0.11
TUBB-208ENST00000396389 IRX6P78412 446 aaPredicted RBP14.35□□□□□ -0.11
TUBB-208ENST00000396389 KDM2AQ9Y2K7 1162 aa14.35□□□□□ -0.11
TUBB-208ENST00000396389 FAM135AQ9P2D6 1515 aa14.34□□□□□ -0.11
TUBB-208ENST00000396389 ZMYM4Q5VZL5 1548 aa14.33□□□□□ -0.12
TUBB-208ENST00000396389 CFAP65Q6ZU64 1925 aaKnown RBP14.33□□□□□ -0.12
TUBB-208ENST00000396389 MAGI2Q86UL8 1455 aa14.33□□□□□ -0.12
TUBB-208ENST00000396389 ARHGEF40Q8TER5 1519 aa14.31□□□□□ -0.12
TUBB-208ENST00000396389 STAG3Q9UJ98 1225 aa14.27□□□□□ -0.12
TUBB-208ENST00000396389 UGGT1Q9NYU2 1555 aa14.27□□□□□ -0.13
TUBB-208ENST00000396389 ANKRD30BQ9BXX2 1392 aa14.26□□□□□ -0.13
TUBB-208ENST00000396389 NPATQ14207 1427 aa14.26□□□□□ -0.13
TUBB-208ENST00000396389 TONSLQ96HA7 1378 aa14.26□□□□□ -0.13
TUBB-208ENST00000396389 L3MBTL2Q969R5 705 aa14.26□□□□□ -0.13
TUBB-208ENST00000396389 MROH1Q8NDA8 1641 aa14.26□□□□□ -0.13
TUBB-208ENST00000396389 ZMYM3Q14202 1370 aa14.25□□□□□ -0.13
TUBB-208ENST00000396389 DCAF11Q8TEB1 546 aa14.25□□□□□ -0.13
TUBB-208ENST00000396389 IDI1Q13907 227 aa14.24□□□□□ -0.13
TUBB-208ENST00000396389 CCDC144AA2RUR9 1427 aa14.24□□□□□ -0.13
TUBB-208ENST00000396389 ABCC3O15438 1527 aa14.23□□□□□ -0.13
TUBB-208ENST00000396389 CEP152O94986 1710 aa14.23□□□□□ -0.13
TUBB-208ENST00000396389 PLA2R1Q13018 1463 aa14.23□□□□□ -0.13
TUBB-208ENST00000396389 UNC13BO14795 1591 aa14.22□□□□□ -0.13
TUBB-208ENST00000396389 PRDM15P57071 1507 aaPredicted RBP14.22□□□□□ -0.13
TUBB-208ENST00000396389 PPP1R15AO75807 674 aaPredicted RBP14.2□□□□□ -0.14
TUBB-208ENST00000396389 CLTCQ00610 1675 aaKnown RBP14.19□□□□□ -0.14
TUBB-208ENST00000396389 IQGAP3Q86VI3 1631 aa14.18□□□□□ -0.14
TUBB-208ENST00000396389 KDM4FA0A1W2PPD8 638 aa14.18□□□□□ -0.14
TUBB-208ENST00000396389 KDM5DQ9BY66 1539 aa14.18□□□□□ -0.14
TUBB-208ENST00000396389 EIF2AK4Q9P2K8 1649 aaKnown RBP14.18□□□□□ -0.14
TUBB-208ENST00000396389 E9PCH4 1651 aa14.17□□□□□ -0.14
TUBB-208ENST00000396389 DEPDC5O75140 1603 aa14.17□□□□□ -0.14
TUBB-208ENST00000396389 AGLP35573 1532 aa14.16□□□□□ -0.14
TUBB-208ENST00000396389 ANP32CO43423 234 aa14.16□□□□□ -0.14
TUBB-208ENST00000396389 RNF17Q9BXT8 1623 aaKnown RBP14.16□□□□□ -0.14
TUBB-208ENST00000396389 EFCAB6Q5THR3 1501 aa14.15□□□□□ -0.14
TUBB-208ENST00000396389 NBPF8Q3BBV2 869 aa14.14□□□□□ -0.15
TUBB-208ENST00000396389 DEKP35659 375 aaKnown RBP14.14□□□□□ -0.15
TUBB-208ENST00000396389 VWDEQ8N2E2 1590 aa14.14□□□□□ -0.15
TUBB-208ENST00000396389 MADDQ8WXG6 1647 aa14.14□□□□□ -0.15
TUBB-208ENST00000396389 HSPA2P54652 639 aa14.13□□□□□ -0.15
TUBB-208ENST00000396389 CAMSAP1Q5T5Y3 1602 aa14.13□□□□□ -0.15
TUBB-208ENST00000396389 HNRNPUQ00839 825 aaKnown RBP eCLIP14.12□□□□□ -0.15
TUBB-208ENST00000396389 RPRD2Q5VT52 1461 aaKnown RBP14.12□□□□□ -0.15
TUBB-208ENST00000396389 TET3O43151 1660 aa14.12□□□□□ -0.15
TUBB-208ENST00000396389 NBR1Q14596 966 aa14.11□□□□□ -0.15
TUBB-208ENST00000396389 PPP6R1Q9UPN7 881 aa14.11□□□□□ -0.15
TUBB-208ENST00000396389 REREQ9P2R6 1566 aa14.11□□□□□ -0.15
TUBB-208ENST00000396389 TNRQ92752 1358 aa14.11□□□□□ -0.15
TUBB-208ENST00000396389 FANCIQ9NVI1 1328 aa14.11□□□□□ -0.15
TUBB-208ENST00000396389 ADGRF5Q8IZF2 1346 aa14.1□□□□□ -0.15
TUBB-208ENST00000396389 NBPF1Q3BBV0 1214 aa14.1□□□□□ -0.15
TUBB-208ENST00000396389 NCBP3Q53F19 620 aaKnown RBP14.1□□□□□ -0.15
TUBB-208ENST00000396389 ERVK-7P63135 1459 aa14.1□□□□□ -0.15
TUBB-208ENST00000396389 RIMS1Q86UR5 1692 aaKnown RBP14.1□□□□□ -0.15
TUBB-208ENST00000396389 SLC52A1Q9NWF4 448 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms