RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 CAMSAP1Q5T5Y3 1602 aa28.61■■■□□ 2.17
FXN-203ENST00000396366 NCOA1Q15788 1441 aa28.6■■■□□ 2.17
FXN-203ENST00000396366 KDM5DQ9BY66 1539 aa28.59■■■□□ 2.17
FXN-203ENST00000396366 ABCC5O15440 1437 aa28.59■■■□□ 2.17
FXN-203ENST00000396366 FGD6Q6ZV73 1430 aa28.58■■■□□ 2.17
FXN-203ENST00000396366 NCKAP5LQ9HCH0 1330 aa28.57■■■□□ 2.16
FXN-203ENST00000396366 PTPRTO14522 1441 aa28.56■■■□□ 2.16
FXN-203ENST00000396366 CEP170BQ9Y4F5 1589 aaPredicted RBP28.56■■■□□ 2.16
FXN-203ENST00000396366 ZNF142P52746 1687 aaPredicted RBP28.55■■■□□ 2.16
FXN-203ENST00000396366 RRP7BPQ9NSQ0 103 aa28.53■■■□□ 2.16
FXN-203ENST00000396366 CROCC2H7BZ55 1655 aa28.53■■■□□ 2.16
FXN-203ENST00000396366 RNF17Q9BXT8 1623 aaKnown RBP28.53■■■□□ 2.16
FXN-203ENST00000396366 PZPP20742 1482 aa28.53■■■□□ 2.16
FXN-203ENST00000396366 TCOF1Q13428 1488 aaKnown RBP28.53■■■□□ 2.16
FXN-203ENST00000396366 DAPK1P53355 1430 aa28.52■■■□□ 2.16
FXN-203ENST00000396366 FAM135AQ9P2D6 1515 aa28.51■■■□□ 2.15
FXN-203ENST00000396366 TNRQ92752 1358 aa28.5■■■□□ 2.15
FXN-203ENST00000396366 DUOX2Q9NRD8 1548 aa28.5■■■□□ 2.15
FXN-203ENST00000396366 EIF2AK4Q9P2K8 1649 aaKnown RBP28.5■■■□□ 2.15
FXN-203ENST00000396366 SHANK2Q9UPX8 1470 aa28.49■■■□□ 2.15
FXN-203ENST00000396366 CHIC2Q9UKJ5 165 aa28.49■■■□□ 2.15
FXN-203ENST00000396366 DNMT1P26358 1616 aaKnown RBP28.49■■■□□ 2.15
FXN-203ENST00000396366 KIF15Q9NS87 1388 aa28.49■■■□□ 2.15
FXN-203ENST00000396366 A2ML1A8K2U0 1454 aa28.48■■■□□ 2.15
FXN-203ENST00000396366 MROH1Q8NDA8 1641 aa28.48■■■□□ 2.15
FXN-203ENST00000396366 ABCC3O15438 1527 aa28.48■■■□□ 2.15
FXN-203ENST00000396366 PLA2R1Q13018 1463 aa28.44■■■□□ 2.14
FXN-203ENST00000396366 PKD2Q13563 968 aa28.42■■■□□ 2.14
FXN-203ENST00000396366 FAM50AQ14320 339 aaKnown RBP28.42■■■□□ 2.14
FXN-203ENST00000396366 CEP152O94986 1710 aa28.42■■■□□ 2.14
FXN-203ENST00000396366 ZC3H13Q5T200 1668 aaKnown RBP28.41■■■□□ 2.14
FXN-203ENST00000396366 LTBP4Q8N2S1 1624 aa28.4■■■□□ 2.14
FXN-203ENST00000396366 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.39■■■□□ 2.14
FXN-203ENST00000396366 CFAP65Q6ZU64 1925 aaKnown RBP28.39■■■□□ 2.13
FXN-203ENST00000396366 ERBINQ96RT1 1412 aa28.38■■■□□ 2.13
FXN-203ENST00000396366 ANKRD30AQ9BXX3 1397 aa28.37■■■□□ 2.13
FXN-203ENST00000396366 PPARGC1BQ86YN6 1023 aaKnown RBP28.36■■■□□ 2.13
FXN-203ENST00000396366 ZNF335Q9H4Z2 1342 aaPredicted RBP28.36■■■□□ 2.13
FXN-203ENST00000396366 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.35■■■□□ 2.13
FXN-203ENST00000396366 NLRP1Q9C000 1473 aa28.34■■■□□ 2.13
FXN-203ENST00000396366 SPATA31D1Q6ZQQ2 1576 aa28.33■■■□□ 2.13
FXN-203ENST00000396366 ERVK-7P63135 1459 aa28.33■■■□□ 2.13
FXN-203ENST00000396366 PRDM15P57071 1507 aaPredicted RBP28.33■■■□□ 2.13
FXN-203ENST00000396366 THEMISQ8N1K5 641 aaPredicted RBP28.31■■■□□ 2.12
FXN-203ENST00000396366 UGGT1Q9NYU2 1555 aa28.31■■■□□ 2.12
FXN-203ENST00000396366 DEPDC5O75140 1603 aa28.3■■■□□ 2.12
FXN-203ENST00000396366 NEURL4Q96JN8 1562 aa28.28■■■□□ 2.12
FXN-203ENST00000396366 POLR1AO95602 1720 aaPredicted RBP28.28■■■□□ 2.12
FXN-203ENST00000396366 ADGRL2O95490 1459 aa28.27■■■□□ 2.12
FXN-203ENST00000396366 ANKLE2Q86XL3 938 aa28.27■■■□□ 2.12
FXN-203ENST00000396366 ARHGAP31Q2M1Z3 1444 aa28.25■■■□□ 2.11
FXN-203ENST00000396366 KANK1Q14678 1352 aa28.24■■■□□ 2.11
FXN-203ENST00000396366 VWDEQ8N2E2 1590 aa28.2■■■□□ 2.1
FXN-203ENST00000396366 UBR1Q8IWV7 1749 aa28.18■■■□□ 2.1
FXN-203ENST00000396366 ANKRD50Q9ULJ7 1429 aa28.18■■■□□ 2.1
FXN-203ENST00000396366 LMTK2Q8IWU2 1503 aa28.17■■■□□ 2.1
FXN-203ENST00000396366 NPHP4O75161 1426 aaPredicted RBP28.17■■■□□ 2.1
FXN-203ENST00000396366 IQSEC2Q5JU85 1478 aa28.16■■■□□ 2.1
FXN-203ENST00000396366 ITGAEP38570 1179 aa28.15■■■□□ 2.1
FXN-203ENST00000396366 MED14O60244 1454 aa28.15■■■□□ 2.1
FXN-203ENST00000396366 PIK3C2BO00750 1634 aa28.1■■■□□ 2.09
FXN-203ENST00000396366 LTKP29376 864 aa28.1■■■□□ 2.09
FXN-203ENST00000396366 IQGAP1P46940 1657 aa28.1■■■□□ 2.09
FXN-203ENST00000396366 EFCAB6Q5THR3 1501 aa28.09■■■□□ 2.09
FXN-203ENST00000396366 IDI1Q13907 227 aa28.09■■■□□ 2.09
FXN-203ENST00000396366 SYNMO15061 1565 aa28.07■■■□□ 2.08
FXN-203ENST00000396366 UBAP1LF5GYI3 381 aa28.07■■■□□ 2.08
FXN-203ENST00000396366 TXNDC2Q86VQ3 553 aa28.06■■■□□ 2.08
FXN-203ENST00000396366 ROCK1Q13464 1354 aa28.06■■■□□ 2.08
FXN-203ENST00000396366 NOS1P29475 1434 aa28.05■■■□□ 2.08
FXN-203ENST00000396366 ARHGAP23Q9P227 1491 aa28.05■■■□□ 2.08
FXN-203ENST00000396366 STAG3Q9UJ98 1225 aa28.05■■■□□ 2.08
FXN-203ENST00000396366 SLIT1O75093 1534 aa28.03■■■□□ 2.08
FXN-203ENST00000396366 SCAF11Q99590 1463 aaKnown RBP28.03■■■□□ 2.08
FXN-203ENST00000396366 CPS1P31327 1500 aa28.02■■■□□ 2.08
FXN-203ENST00000396366 STRCP1A6NGW2 1772 aa28.01■■■□□ 2.07
FXN-203ENST00000396366 UNC13BO14795 1591 aa28■■■□□ 2.07
FXN-203ENST00000396366 TMEM2Q9UHN6 1383 aa27.99■■■□□ 2.07
FXN-203ENST00000396366 TET3O43151 1660 aa27.98■■■□□ 2.07
FXN-203ENST00000396366 EID1Q9Y6B2 187 aa27.98■■■□□ 2.07
FXN-203ENST00000396366 RPRD2Q5VT52 1461 aaKnown RBP27.95■■■□□ 2.07
FXN-203ENST00000396366 SLC52A1Q9NWF4 448 aa27.95■■■□□ 2.06
FXN-203ENST00000396366 KDM5AP29375 1690 aaKnown RBP27.94■■■□□ 2.06
FXN-203ENST00000396366 GCC2Q8IWJ2 1684 aa27.94■■■□□ 2.06
FXN-203ENST00000396366 E9PCH4 1651 aa27.91■■■□□ 2.06
FXN-203ENST00000396366 NUP155O75694 1391 aa27.91■■■□□ 2.06
FXN-203ENST00000396366 PIP4K2BP78356 416 aa27.91■■■□□ 2.06
FXN-203ENST00000396366 ADGRB3O60242 1522 aa27.91■■■□□ 2.06
FXN-203ENST00000396366 RRBP1Q9P2E9 1410 aaKnown RBP27.91■■■□□ 2.06
FXN-203ENST00000396366 IQGAP3Q86VI3 1631 aa27.89■■■□□ 2.06
FXN-203ENST00000396366 LRRC7Q96NW7 1537 aa27.89■■■□□ 2.06
FXN-203ENST00000396366 SCAF1Q9H7N4 1312 aaKnown RBP27.89■■■□□ 2.05
FXN-203ENST00000396366 MYO5BQ9ULV0 1848 aa27.88■■■□□ 2.05
FXN-203ENST00000396366 SENP3Q9H4L4 574 aaPredicted RBP27.88■■■□□ 2.05
FXN-203ENST00000396366 TOM1O60784 492 aa27.87■■■□□ 2.05
FXN-203ENST00000396366 SLC26A8Q96RN1 970 aa27.85■■■□□ 2.05
FXN-203ENST00000396366 ALKQ9UM73 1620 aa27.83■■■□□ 2.05
FXN-203ENST00000396366 CHGAP10645 457 aaKnown RBP27.83■■■□□ 2.05
FXN-203ENST00000396366 TMEM131LA2VDJ0 1609 aa27.82■■■□□ 2.04
FXN-203ENST00000396366 DISP3Q9P2K9 1392 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms