RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 ACIN1Q9UKV3 1341 aaKnown RBP31.88■■■□□ 2.69
FXN-202ENST00000396364 FAM135AQ9P2D6 1515 aa31.87■■■□□ 2.69
FXN-202ENST00000396364 KANK1Q14678 1352 aa31.86■■■□□ 2.69
FXN-202ENST00000396364 DEPDC5O75140 1603 aa31.85■■■□□ 2.69
FXN-202ENST00000396364 FER1L4A9Z1Z3 1794 aa31.84■■■□□ 2.69
FXN-202ENST00000396364 ADAMTSL3P82987 1691 aa31.84■■■□□ 2.69
FXN-202ENST00000396364 SETD5Q9C0A6 1442 aa31.83■■■□□ 2.69
FXN-202ENST00000396364 CNTLNQ9NXG0 1405 aa31.82■■■□□ 2.68
FXN-202ENST00000396364 PRDM15P57071 1507 aaPredicted RBP31.81■■■□□ 2.68
FXN-202ENST00000396364 ZC3H13Q5T200 1668 aaKnown RBP31.8■■■□□ 2.68
FXN-202ENST00000396364 UNC13BO14795 1591 aa31.79■■■□□ 2.68
FXN-202ENST00000396364 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.78■■■□□ 2.68
FXN-202ENST00000396364 KDM5DQ9BY66 1539 aa31.78■■■□□ 2.68
FXN-202ENST00000396364 MADDQ8WXG6 1647 aa31.78■■■□□ 2.68
FXN-202ENST00000396364 WASHC2CQ9Y4E1 1318 aa31.77■■■□□ 2.68
FXN-202ENST00000396364 MROH1Q8NDA8 1641 aa31.76■■■□□ 2.67
FXN-202ENST00000396364 MROH2AA6NES4 1674 aa31.73■■■□□ 2.67
FXN-202ENST00000396364 CLTCQ00610 1675 aaKnown RBP31.73■■■□□ 2.67
FXN-202ENST00000396364 RIMS1Q86UR5 1692 aaKnown RBP31.73■■■□□ 2.67
FXN-202ENST00000396364 NUP155O75694 1391 aa31.69■■■□□ 2.66
FXN-202ENST00000396364 RAB3GAP2Q9H2M9 1393 aa31.69■■■□□ 2.66
FXN-202ENST00000396364 ABCC3O15438 1527 aa31.69■■■□□ 2.66
FXN-202ENST00000396364 HRCP23327 699 aa31.68■■■□□ 2.66
FXN-202ENST00000396364 TRIM52Q96A61 297 aa31.68■■■□□ 2.66
FXN-202ENST00000396364 VWDEQ8N2E2 1590 aa31.68■■■□□ 2.66
FXN-202ENST00000396364 CEP152O94986 1710 aa31.67■■■□□ 2.66
FXN-202ENST00000396364 KDM4FA0A1W2PPD8 638 aa31.67■■■□□ 2.66
FXN-202ENST00000396364 IQGAP3Q86VI3 1631 aa31.67■■■□□ 2.66
FXN-202ENST00000396364 LMTK2Q8IWU2 1503 aa31.65■■■□□ 2.66
FXN-202ENST00000396364 CAMSAP1Q5T5Y3 1602 aa31.63■■■□□ 2.65
FXN-202ENST00000396364 TET3O43151 1660 aa31.61■■■□□ 2.65
FXN-202ENST00000396364 PTPRMP28827 1452 aa31.61■■■□□ 2.65
FXN-202ENST00000396364 ZMYM3Q14202 1370 aa31.61■■■□□ 2.65
FXN-202ENST00000396364 PCGF6Q9BYE7 350 aa31.61■■■□□ 2.65
FXN-202ENST00000396364 C3P01024 1663 aa31.58■■■□□ 2.65
FXN-202ENST00000396364 EFCAB6Q5THR3 1501 aa31.56■■■□□ 2.64
FXN-202ENST00000396364 ARHGAP31Q2M1Z3 1444 aa31.56■■■□□ 2.64
FXN-202ENST00000396364 PZPP20742 1482 aa31.55■■■□□ 2.64
FXN-202ENST00000396364 RPRD2Q5VT52 1461 aaKnown RBP31.52■■■□□ 2.64
FXN-202ENST00000396364 SLC4A1APQ9BWU0 796 aaKnown RBP31.52■■■□□ 2.64
FXN-202ENST00000396364 PLPPR3Q6T4P5 718 aa31.5■■■□□ 2.63
FXN-202ENST00000396364 NPATQ14207 1427 aa31.49■■■□□ 2.63
FXN-202ENST00000396364 CEBPAP49715 358 aaPredicted RBP31.47■■■□□ 2.63
FXN-202ENST00000396364 E9PCH4 1651 aa31.45■■■□□ 2.63
FXN-202ENST00000396364 MPHOSPH9Q99550 1183 aa31.45■■■□□ 2.63
FXN-202ENST00000396364 PREX1Q8TCU6 1659 aa31.43■■■□□ 2.62
FXN-202ENST00000396364 SETD1BQ9UPS6 1966 aaKnown RBP31.42■■■□□ 2.62
FXN-202ENST00000396364 CFAP65Q6ZU64 1925 aaKnown RBP31.41■■■□□ 2.62
FXN-202ENST00000396364 PKD2Q13563 968 aa31.41■■■□□ 2.62
FXN-202ENST00000396364 ERVK-7P63135 1459 aa31.4■■■□□ 2.62
FXN-202ENST00000396364 SPATA31D1Q6ZQQ2 1576 aa31.4■■■□□ 2.62
FXN-202ENST00000396364 AEBP2Q6ZN18 517 aaPredicted RBP31.4■■■□□ 2.62
FXN-202ENST00000396364 TNRQ92752 1358 aa31.37■■■□□ 2.61
FXN-202ENST00000396364 FBXO31Q5XUX0 539 aaPredicted RBP31.36■■■□□ 2.61
FXN-202ENST00000396364 SPHKAPQ2M3C7 1700 aa31.35■■■□□ 2.61
FXN-202ENST00000396364 NOS1P29475 1434 aa31.32■■■□□ 2.61
FXN-202ENST00000396364 NLRP1Q9C000 1473 aa31.3■■■□□ 2.6
FXN-202ENST00000396364 UHRF1BP1Q6BDS2 1440 aa31.3■■■□□ 2.6
FXN-202ENST00000396364 SLC52A1Q9NWF4 448 aa31.29■■■□□ 2.6
FXN-202ENST00000396364 MYO3AQ8NEV4 1616 aa31.28■■■□□ 2.6
FXN-202ENST00000396364 PTPRTO14522 1441 aa31.27■■■□□ 2.6
FXN-202ENST00000396364 SYNMO15061 1565 aa31.26■■■□□ 2.59
FXN-202ENST00000396364 TRPM2O94759 1503 aa31.25■■■□□ 2.59
FXN-202ENST00000396364 ZNF142P52746 1687 aaPredicted RBP31.22■■■□□ 2.59
FXN-202ENST00000396364 FOXD1Q16676 465 aa31.21■■■□□ 2.59
FXN-202ENST00000396364 A2ML1A8K2U0 1454 aa31.21■■■□□ 2.59
FXN-202ENST00000396364 CEP170BQ9Y4F5 1589 aaPredicted RBP31.2■■■□□ 2.58
FXN-202ENST00000396364 STAG3Q9UJ98 1225 aa31.19■■■□□ 2.58
FXN-202ENST00000396364 PIK3C2BO00750 1634 aa31.19■■■□□ 2.58
FXN-202ENST00000396364 CCDC144AA2RUR9 1427 aa31.17■■■□□ 2.58
FXN-202ENST00000396364 DHX57Q6P158 1386 aaKnown RBP31.17■■■□□ 2.58
FXN-202ENST00000396364 KDM5AP29375 1690 aaKnown RBP31.16■■■□□ 2.58
FXN-202ENST00000396364 UGGT1Q9NYU2 1555 aa31.15■■■□□ 2.58
FXN-202ENST00000396364 IDI1Q13907 227 aa31.15■■■□□ 2.58
FXN-202ENST00000396364 PLA2R1Q13018 1463 aa31.14■■■□□ 2.57
FXN-202ENST00000396364 KIF1BO60333 1816 aa31.12■■■□□ 2.57
FXN-202ENST00000396364 CLTCL1P53675 1640 aa31.12■■■□□ 2.57
FXN-202ENST00000396364 THEMISQ8N1K5 641 aaPredicted RBP31.11■■■□□ 2.57
FXN-202ENST00000396364 LMTK3Q96Q04 1460 aa31.11■■■□□ 2.57
FXN-202ENST00000396364 ANKRD30BQ9BXX2 1392 aa31.11■■■□□ 2.57
FXN-202ENST00000396364 ADGRB3O60242 1522 aa31.1■■■□□ 2.57
FXN-202ENST00000396364 UBR1Q8IWV7 1749 aa31.1■■■□□ 2.57
FXN-202ENST00000396364 CHGAP10645 457 aaKnown RBP31.08■■■□□ 2.57
FXN-202ENST00000396364 TMEM131LA2VDJ0 1609 aa31.04■■■□□ 2.56
FXN-202ENST00000396364 HDGFP51858 240 aaKnown RBP31■■■□□ 2.55
FXN-202ENST00000396364 NEURL4Q96JN8 1562 aa30.99■■■□□ 2.55
FXN-202ENST00000396364 CLSPNQ9HAW4 1339 aa30.98■■■□□ 2.55
FXN-202ENST00000396364 MYO5BQ9ULV0 1848 aa30.98■■■□□ 2.55
FXN-202ENST00000396364 ZNF326Q5BKZ1 582 aaKnown RBP30.97■■■□□ 2.55
FXN-202ENST00000396364 CCER1Q8TC90 406 aaPredicted RBP30.97■■■□□ 2.55
FXN-202ENST00000396364 EID1Q9Y6B2 187 aa30.96■■■□□ 2.55
FXN-202ENST00000396364 TMEM2Q9UHN6 1383 aa30.94■■■□□ 2.54
FXN-202ENST00000396364 SLIT1O75093 1534 aa30.94■■■□□ 2.54
FXN-202ENST00000396364 HSPA2P54652 639 aa30.94■■■□□ 2.54
FXN-202ENST00000396364 ANKLE2Q86XL3 938 aa30.93■■■□□ 2.54
FXN-202ENST00000396364 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.92■■■□□ 2.54
FXN-202ENST00000396364 RPGRIP1LQ68CZ1 1315 aa30.92■■■□□ 2.54
FXN-202ENST00000396364 ARHGAP23Q9P227 1491 aa30.91■■■□□ 2.54
FXN-202ENST00000396364 POLR1AO95602 1720 aaPredicted RBP30.9■■■□□ 2.54
FXN-202ENST00000396364 SPATA31E1Q6ZUB1 1445 aa30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms