RNA–Protein interactions for RNA: ENST00000396205.6

LMO3-205, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 3,534 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-205ENST00000396205 ARHGAP31Q2M1Z3 1444 aa10.44□□□□□ -0.74
LMO3-205ENST00000396205 ABCC5O15440 1437 aa10.43□□□□□ -0.74
LMO3-205ENST00000396205 PTPRKQ15262 1439 aa10.43□□□□□ -0.74
LMO3-205ENST00000396205 ABCC3O15438 1527 aa10.43□□□□□ -0.74
LMO3-205ENST00000396205 POLR1AO95602 1720 aaPredicted RBP10.42□□□□□ -0.74
LMO3-205ENST00000396205 GCC2Q8IWJ2 1684 aa10.42□□□□□ -0.74
LMO3-205ENST00000396205 LOC105371045A0A1W2PR82 267 aa10.42□□□□□ -0.74
LMO3-205ENST00000396205 CEP170BQ9Y4F5 1589 aaPredicted RBP10.42□□□□□ -0.74
LMO3-205ENST00000396205 IQSEC2Q5JU85 1478 aa10.42□□□□□ -0.74
LMO3-205ENST00000396205 ROCK1Q13464 1354 aa10.41□□□□□ -0.74
LMO3-205ENST00000396205 PTPRTO14522 1441 aa10.4□□□□□ -0.74
LMO3-205ENST00000396205 EHMT2Q96KQ7 1210 aa10.4□□□□□ -0.74
LMO3-205ENST00000396205 NLRP1Q9C000 1473 aa10.4□□□□□ -0.74
LMO3-205ENST00000396205 UHRF1BP1Q6BDS2 1440 aa10.4□□□□□ -0.74
LMO3-205ENST00000396205 CEP152O94986 1710 aa10.4□□□□□ -0.75
LMO3-205ENST00000396205 HNRNPMP52272 730 aaKnown RBP eCLIP10.4□□□□□ -0.75
LMO3-205ENST00000396205 KANK4Q5T7N3 995 aaPredicted RBP10.4□□□□□ -0.75
LMO3-205ENST00000396205 A2ML1A8K2U0 1454 aa10.39□□□□□ -0.75
LMO3-205ENST00000396205 TET3O43151 1660 aa10.39□□□□□ -0.75
LMO3-205ENST00000396205 RPRD2Q5VT52 1461 aaKnown RBP10.38□□□□□ -0.75
LMO3-205ENST00000396205 IQGAP3Q86VI3 1631 aa10.38□□□□□ -0.75
LMO3-205ENST00000396205 RRBP1Q9P2E9 1410 aaKnown RBP10.38□□□□□ -0.75
LMO3-205ENST00000396205 ZNF644Q9H582 1327 aaPredicted RBP10.37□□□□□ -0.75
LMO3-205ENST00000396205 EFCAB6Q5THR3 1501 aa10.37□□□□□ -0.75
LMO3-205ENST00000396205 NCOA1Q15788 1441 aa10.37□□□□□ -0.75
LMO3-205ENST00000396205 ARID4BQ4LE39 1312 aaPredicted RBP10.37□□□□□ -0.75
LMO3-205ENST00000396205 ZMYM3Q14202 1370 aa10.36□□□□□ -0.75
LMO3-205ENST00000396205 PIK3C2BO00750 1634 aa10.36□□□□□ -0.75
LMO3-205ENST00000396205 UBR1Q8IWV7 1749 aa10.35□□□□□ -0.75
LMO3-205ENST00000396205 MED14O60244 1454 aa10.35□□□□□ -0.75
LMO3-205ENST00000396205 ANKRD30AQ9BXX3 1397 aa10.34□□□□□ -0.75
LMO3-205ENST00000396205 ERVK-7P63135 1459 aa10.34□□□□□ -0.75
LMO3-205ENST00000396205 TSPY4P0CV99 314 aa10.33□□□□□ -0.76
LMO3-205ENST00000396205 TSPY10P0CW01 314 aa10.33□□□□□ -0.76
LMO3-205ENST00000396205 NEURL4Q96JN8 1562 aa10.33□□□□□ -0.76
LMO3-205ENST00000396205 SLIT1O75093 1534 aa10.33□□□□□ -0.76
LMO3-205ENST00000396205 KIF15Q9NS87 1388 aa10.33□□□□□ -0.76
LMO3-205ENST00000396205 APLP2Q06481 763 aa10.33□□□□□ -0.76
LMO3-205ENST00000396205 ZNF777Q9ULD5 760 aaPredicted RBP10.32□□□□□ -0.76
LMO3-205ENST00000396205 ARHGAP23Q9P227 1491 aa10.31□□□□□ -0.76
LMO3-205ENST00000396205 SYNMO15061 1565 aa10.3□□□□□ -0.76
LMO3-205ENST00000396205 UGGT1Q9NYU2 1555 aa10.3□□□□□ -0.76
LMO3-205ENST00000396205 LTBP4Q8N2S1 1624 aa10.3□□□□□ -0.76
LMO3-205ENST00000396205 NOS1P29475 1434 aa10.29□□□□□ -0.76
LMO3-205ENST00000396205 DMRT2Q9Y5R5 561 aa10.28□□□□□ -0.76
LMO3-205ENST00000396205 IQGAP1P46940 1657 aa10.28□□□□□ -0.76
LMO3-205ENST00000396205 TNRQ92752 1358 aa10.28□□□□□ -0.76
LMO3-205ENST00000396205 ADGRB3O60242 1522 aa10.28□□□□□ -0.76
LMO3-205ENST00000396205 E9PCH4 1651 aa10.28□□□□□ -0.76
LMO3-205ENST00000396205 ACIN1Q9UKV3 1341 aaKnown RBP10.26□□□□□ -0.77
LMO3-205ENST00000396205 ANKRD50Q9ULJ7 1429 aa10.26□□□□□ -0.77
LMO3-205ENST00000396205 PKD2Q13563 968 aa10.26□□□□□ -0.77
LMO3-205ENST00000396205 CPS1P31327 1500 aa10.26□□□□□ -0.77
LMO3-205ENST00000396205 ESF1Q9H501 851 aaKnown RBP10.25□□□□□ -0.77
LMO3-205ENST00000396205 KANK1Q14678 1352 aa10.25□□□□□ -0.77
LMO3-205ENST00000396205 SPHKAPQ2M3C7 1700 aa10.25□□□□□ -0.77
LMO3-205ENST00000396205 DIP2AQ14689 1571 aa10.24□□□□□ -0.77
LMO3-205ENST00000396205 NWD1Q149M9 1564 aa10.24□□□□□ -0.77
LMO3-205ENST00000396205 TMEM131LA2VDJ0 1609 aa10.24□□□□□ -0.77
LMO3-205ENST00000396205 KIF3BO15066 747 aa10.23□□□□□ -0.77
LMO3-205ENST00000396205 HFM1A2PYH4 1435 aa10.23□□□□□ -0.77
LMO3-205ENST00000396205 MYT1LQ9UL68 1186 aa10.22□□□□□ -0.77
LMO3-205ENST00000396205 MLECQ14165 292 aa10.21□□□□□ -0.77
LMO3-205ENST00000396205 WASHC2CQ9Y4E1 1318 aa10.21□□□□□ -0.78
LMO3-205ENST00000396205 TRPM2O94759 1503 aa10.21□□□□□ -0.78
LMO3-205ENST00000396205 CEBPAP49715 358 aaPredicted RBP10.18□□□□□ -0.78
LMO3-205ENST00000396205 GGT6Q6P531 493 aa10.18□□□□□ -0.78
LMO3-205ENST00000396205 NAIPQ13075 1403 aa10.18□□□□□ -0.78
LMO3-205ENST00000396205 SCAF11Q99590 1463 aaKnown RBP10.18□□□□□ -0.78
LMO3-205ENST00000396205 MYO5BQ9ULV0 1848 aa10.17□□□□□ -0.78
LMO3-205ENST00000396205 ZFYVE9O95405 1425 aa10.17□□□□□ -0.78
LMO3-205ENST00000396205 PRAG1Q86YV5 1406 aa10.17□□□□□ -0.78
LMO3-205ENST00000396205 STRCP1A6NGW2 1772 aa10.16□□□□□ -0.78
LMO3-205ENST00000396205 SETBP1Q9Y6X0 1596 aa10.15□□□□□ -0.78
LMO3-205ENST00000396205 NPHP4O75161 1426 aaPredicted RBP10.15□□□□□ -0.78
LMO3-205ENST00000396205 IFT172Q9UG01 1749 aa10.15□□□□□ -0.78
LMO3-205ENST00000396205 KIF1BO60333 1816 aa10.15□□□□□ -0.78
LMO3-205ENST00000396205 XIRP1Q702N8 1843 aaKnown RBP10.15□□□□□ -0.78
LMO3-205ENST00000396205 THEMISQ8N1K5 641 aaPredicted RBP10.15□□□□□ -0.78
LMO3-205ENST00000396205 CHD2O14647 1828 aaKnown RBP10.15□□□□□ -0.79
LMO3-205ENST00000396205 SLC52A1Q9NWF4 448 aa10.15□□□□□ -0.79
LMO3-205ENST00000396205 NKTRP30414 1462 aaKnown RBP10.14□□□□□ -0.79
LMO3-205ENST00000396205 FBXO41Q8TF61 875 aa10.14□□□□□ -0.79
LMO3-205ENST00000396205 TMEM2Q9UHN6 1383 aa10.13□□□□□ -0.79
LMO3-205ENST00000396205 RRP7BPQ9NSQ0 103 aa10.13□□□□□ -0.79
LMO3-205ENST00000396205 SETD1AO15047 1707 aaKnown RBP10.13□□□□□ -0.79
LMO3-205ENST00000396205 NCOA3Q9Y6Q9 1424 aa10.12□□□□□ -0.79
LMO3-205ENST00000396205 CLTCL1P53675 1640 aa10.12□□□□□ -0.79
LMO3-205ENST00000396205 NRXN3Q9Y4C0 1643 aa10.12□□□□□ -0.79
LMO3-205ENST00000396205 PPLO60437 1756 aa10.11□□□□□ -0.79
LMO3-205ENST00000396205 XRN1Q8IZH2 1706 aaKnown RBP10.11□□□□□ -0.79
LMO3-205ENST00000396205 HSPA2P54652 639 aa10.11□□□□□ -0.79
LMO3-205ENST00000396205 ALKQ9UM73 1620 aa10.1□□□□□ -0.79
LMO3-205ENST00000396205 PIK3R4Q99570 1358 aa10.1□□□□□ -0.79
LMO3-205ENST00000396205 PLEKHG1Q9ULL1 1385 aa10.1□□□□□ -0.79
LMO3-205ENST00000396205 FBXO31Q5XUX0 539 aaPredicted RBP10.1□□□□□ -0.79
LMO3-205ENST00000396205 CERKQ8TCT0 537 aa10.1□□□□□ -0.79
LMO3-205ENST00000396205 NEXMIFQ5QGS0 1516 aa10.09□□□□□ -0.79
LMO3-205ENST00000396205 ANKLE2Q86XL3 938 aa10.09□□□□□ -0.79
LMO3-205ENST00000396205 CFAP65Q6ZU64 1925 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms