RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 PLEKHD1A6NEE1 506 aa7.83□□□□□ -1.16
VPS41-203ENST00000395969 HECW2Q9P2P5 1572 aa7.83□□□□□ -1.16
VPS41-203ENST00000395969 FRMPD1Q5SYB0 1578 aa7.83□□□□□ -1.16
VPS41-203ENST00000395969 SPHKAPQ2M3C7 1700 aa7.83□□□□□ -1.16
VPS41-203ENST00000395969 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.83□□□□□ -1.16
VPS41-203ENST00000395969 P3H3Q8IVL6 736 aa7.83□□□□□ -1.16
VPS41-203ENST00000395969 TRPM2O94759 1503 aa7.83□□□□□ -1.16
VPS41-203ENST00000395969 KDM5AP29375 1690 aaKnown RBP7.83□□□□□ -1.16
VPS41-203ENST00000395969 PTPRTO14522 1441 aa7.82□□□□□ -1.16
VPS41-203ENST00000395969 PIK3C2BO00750 1634 aa7.82□□□□□ -1.16
VPS41-203ENST00000395969 CCER1Q8TC90 406 aaPredicted RBP7.82□□□□□ -1.16
VPS41-203ENST00000395969 ASXL2Q76L83 1435 aa7.82□□□□□ -1.16
VPS41-203ENST00000395969 E9PCH4 1651 aa7.81□□□□□ -1.16
VPS41-203ENST00000395969 AGLP35573 1532 aa7.81□□□□□ -1.16
VPS41-203ENST00000395969 ANKRD50Q9ULJ7 1429 aa7.81□□□□□ -1.16
VPS41-203ENST00000395969 ZNF518AQ6AHZ1 1483 aa7.8□□□□□ -1.16
VPS41-203ENST00000395969 KIF13AQ9H1H9 1805 aa7.8□□□□□ -1.16
VPS41-203ENST00000395969 ARXQ96QS3 562 aa7.8□□□□□ -1.16
VPS41-203ENST00000395969 TRPM1Q7Z4N2 1603 aa7.8□□□□□ -1.16
VPS41-203ENST00000395969 POGZQ7Z3K3 1410 aa7.79□□□□□ -1.16
VPS41-203ENST00000395969 MSH5O43196 834 aa7.79□□□□□ -1.16
VPS41-203ENST00000395969 MAPK8IP2Q13387 824 aaPredicted RBP7.79□□□□□ -1.16
VPS41-203ENST00000395969 OSCARQ8IYS5 282 aa7.79□□□□□ -1.16
VPS41-203ENST00000395969 EFCAB6Q5THR3 1501 aa7.79□□□□□ -1.16
VPS41-203ENST00000395969 FANCAO15360 1455 aa7.78□□□□□ -1.16
VPS41-203ENST00000395969 ABCA6Q8N139 1617 aa7.78□□□□□ -1.16
VPS41-203ENST00000395969 MYO3AQ8NEV4 1616 aa7.78□□□□□ -1.16
VPS41-203ENST00000395969 SPATA31E1Q6ZUB1 1445 aa7.78□□□□□ -1.16
VPS41-203ENST00000395969 ZBTB22O15209 634 aa7.78□□□□□ -1.16
VPS41-203ENST00000395969 DIP2CQ9Y2E4 1556 aa7.77□□□□□ -1.17
VPS41-203ENST00000395969 RALGAPBQ86X10 1494 aa7.77□□□□□ -1.17
VPS41-203ENST00000395969 NRXN1Q9ULB1 1477 aa7.77□□□□□ -1.17
VPS41-203ENST00000395969 ZNF316A6NFI3 1004 aaPredicted RBP7.77□□□□□ -1.17
VPS41-203ENST00000395969 CFDP1Q9UEE9 299 aaPredicted RBP7.77□□□□□ -1.17
VPS41-203ENST00000395969 ARHGAP31Q2M1Z3 1444 aa7.76□□□□□ -1.17
VPS41-203ENST00000395969 IQGAP1P46940 1657 aa7.76□□□□□ -1.17
VPS41-203ENST00000395969 STAC3Q96MF2 364 aa7.76□□□□□ -1.17
VPS41-203ENST00000395969 MROH2AA6NES4 1674 aa7.76□□□□□ -1.17
VPS41-203ENST00000395969 KIF15Q9NS87 1388 aa7.75□□□□□ -1.17
VPS41-203ENST00000395969 GPRASP1Q5JY77 1395 aa7.75□□□□□ -1.17
VPS41-203ENST00000395969 MYOM2P54296 1465 aa7.75□□□□□ -1.17
VPS41-203ENST00000395969 PLA2R1Q13018 1463 aa7.75□□□□□ -1.17
VPS41-203ENST00000395969 ANP32EQ9BTT0 268 aa7.75□□□□□ -1.17
VPS41-203ENST00000395969 SETBP1Q9Y6X0 1596 aa7.74□□□□□ -1.17
VPS41-203ENST00000395969 HNRNPUL2Q1KMD3 747 aaKnown RBP7.74□□□□□ -1.17
VPS41-203ENST00000395969 CAMSAP1Q5T5Y3 1602 aa7.74□□□□□ -1.17
VPS41-203ENST00000395969 MADDQ8WXG6 1647 aa7.74□□□□□ -1.17
VPS41-203ENST00000395969 PPP1R15AO75807 674 aaPredicted RBP7.74□□□□□ -1.17
VPS41-203ENST00000395969 KLHL34Q8N239 644 aa7.74□□□□□ -1.17
VPS41-203ENST00000395969 TRAPPC8Q9Y2L5 1435 aa7.74□□□□□ -1.17
VPS41-203ENST00000395969 ADGRL1O94910 1474 aa7.73□□□□□ -1.17
VPS41-203ENST00000395969 ADGRB3O60242 1522 aa7.73□□□□□ -1.17
VPS41-203ENST00000395969 ARID4BQ4LE39 1312 aaPredicted RBP7.72□□□□□ -1.17
VPS41-203ENST00000395969 DHX29Q7Z478 1369 aaKnown RBP7.72□□□□□ -1.17
VPS41-203ENST00000395969 EFCAB2Q5VUJ9 269 aa7.72□□□□□ -1.17
VPS41-203ENST00000395969 PPLO60437 1756 aa7.72□□□□□ -1.17
VPS41-203ENST00000395969 FAM50AQ14320 339 aaKnown RBP7.72□□□□□ -1.17
VPS41-203ENST00000395969 MPHOSPH9Q99550 1183 aa7.72□□□□□ -1.17
VPS41-203ENST00000395969 SCAPERQ9BY12 1400 aa7.72□□□□□ -1.17
VPS41-203ENST00000395969 UGGT1Q9NYU2 1555 aa7.72□□□□□ -1.17
VPS41-203ENST00000395969 ARHGEF40Q8TER5 1519 aa7.72□□□□□ -1.17
VPS41-203ENST00000395969 KIF1BO60333 1816 aa7.72□□□□□ -1.17
VPS41-203ENST00000395969 BCANQ96GW7 911 aa7.71□□□□□ -1.17
VPS41-203ENST00000395969 CLTCL1P53675 1640 aa7.71□□□□□ -1.18
VPS41-203ENST00000395969 SYNMO15061 1565 aa7.71□□□□□ -1.18
VPS41-203ENST00000395969 HAP1P54257 671 aaPredicted RBP7.71□□□□□ -1.18
VPS41-203ENST00000395969 MIER1Q8N108 512 aa7.71□□□□□ -1.18
VPS41-203ENST00000395969 ZNF644Q9H582 1327 aaPredicted RBP7.71□□□□□ -1.18
VPS41-203ENST00000395969 RANGAP1P46060 587 aaPredicted RBP7.7□□□□□ -1.18
VPS41-203ENST00000395969 FBLN2P98095 1184 aa7.7□□□□□ -1.18
VPS41-203ENST00000395969 ABCC3O15438 1527 aa7.7□□□□□ -1.18
VPS41-203ENST00000395969 A2MP01023 1474 aa7.69□□□□□ -1.18
VPS41-203ENST00000395969 CD109Q6YHK3 1445 aa7.69□□□□□ -1.18
VPS41-203ENST00000395969 SIGLEC1Q9BZZ2 1709 aa7.68□□□□□ -1.18
VPS41-203ENST00000395969 ZFYVE9O95405 1425 aa7.68□□□□□ -1.18
VPS41-203ENST00000395969 NOS1P29475 1434 aa7.68□□□□□ -1.18
VPS41-203ENST00000395969 NPM3O75607 178 aaKnown RBP7.68□□□□□ -1.18
VPS41-203ENST00000395969 PLCB2Q00722 1185 aa7.68□□□□□ -1.18
VPS41-203ENST00000395969 PODXL2Q9NZ53 605 aa7.68□□□□□ -1.18
VPS41-203ENST00000395969 CNTLNQ9NXG0 1405 aa7.67□□□□□ -1.18
VPS41-203ENST00000395969 TSHZ2Q9NRE2 1034 aa7.67□□□□□ -1.18
VPS41-203ENST00000395969 SUPT16HQ9Y5B9 1047 aaKnown RBP7.67□□□□□ -1.18
VPS41-203ENST00000395969 PREX1Q8TCU6 1659 aa7.67□□□□□ -1.18
VPS41-203ENST00000395969 PRAG1Q86YV5 1406 aa7.66□□□□□ -1.18
VPS41-203ENST00000395969 SPATA31D1Q6ZQQ2 1576 aa7.66□□□□□ -1.18
VPS41-203ENST00000395969 USP32Q8NFA0 1604 aa7.65□□□□□ -1.18
VPS41-203ENST00000395969 TSPY4P0CV99 314 aa7.65□□□□□ -1.18
VPS41-203ENST00000395969 TSPY10P0CW01 314 aa7.65□□□□□ -1.18
VPS41-203ENST00000395969 SETD1AO15047 1707 aaKnown RBP7.65□□□□□ -1.18
VPS41-203ENST00000395969 INSRP06213 1382 aa7.65□□□□□ -1.19
VPS41-203ENST00000395969 TONSLQ96HA7 1378 aa7.64□□□□□ -1.19
VPS41-203ENST00000395969 KNDC1Q76NI1 1749 aa7.64□□□□□ -1.19
VPS41-203ENST00000395969 CLTCQ00610 1675 aaKnown RBP7.64□□□□□ -1.19
VPS41-203ENST00000395969 HOMEZQ8IX15 550 aa7.63□□□□□ -1.19
VPS41-203ENST00000395969 TMEM131LA2VDJ0 1609 aa7.63□□□□□ -1.19
VPS41-203ENST00000395969 NUP155O75694 1391 aa7.62□□□□□ -1.19
VPS41-203ENST00000395969 KTN1Q86UP2 1357 aaKnown RBP7.61□□□□□ -1.19
VPS41-203ENST00000395969 ATP1B4Q9UN42 357 aaPredicted RBP7.61□□□□□ -1.19
VPS41-203ENST00000395969 SBNO2Q9Y2G9 1366 aa7.61□□□□□ -1.19
VPS41-203ENST00000395969 MYOM1P52179 1685 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms