RNA–Protein interactions for RNA: ENST00000395946.2

XCR1-202, Transcript of X-C motif chemokine receptor 1, humanhuman

TSL 1 (best)

Gene XCR1, Length 332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-202ENST00000395946 GGT6Q6P531 493 aa11.21□□□□□ -0.61
XCR1-202ENST00000395946 ARHGEF5Q12774 1597 aa11.2□□□□□ -0.62
XCR1-202ENST00000395946 SPATA31D1Q6ZQQ2 1576 aa11.2□□□□□ -0.62
XCR1-202ENST00000395946 NCOA2Q15596 1464 aa11.2□□□□□ -0.62
XCR1-202ENST00000395946 DISP3Q9P2K9 1392 aa11.2□□□□□ -0.62
XCR1-202ENST00000395946 CAMSAP2Q08AD1 1489 aa11.19□□□□□ -0.62
XCR1-202ENST00000395946 NLRP1Q9C000 1473 aa11.19□□□□□ -0.62
XCR1-202ENST00000395946 CPS1P31327 1500 aa11.19□□□□□ -0.62
XCR1-202ENST00000395946 TNRQ92752 1358 aa11.18□□□□□ -0.62
XCR1-202ENST00000395946 DNMT1P26358 1616 aaKnown RBP11.18□□□□□ -0.62
XCR1-202ENST00000395946 ZNF644Q9H582 1327 aaPredicted RBP11.17□□□□□ -0.62
XCR1-202ENST00000395946 MAP3K1Q13233 1512 aa11.17□□□□□ -0.62
XCR1-202ENST00000395946 MAST1Q9Y2H9 1570 aa11.16□□□□□ -0.62
XCR1-202ENST00000395946 ZNF335Q9H4Z2 1342 aaPredicted RBP11.16□□□□□ -0.62
XCR1-202ENST00000395946 NCKAP5LQ9HCH0 1330 aa11.16□□□□□ -0.62
XCR1-202ENST00000395946 SOCS7O14512 581 aa11.16□□□□□ -0.62
XCR1-202ENST00000395946 ZC3H13Q5T200 1668 aaKnown RBP11.16□□□□□ -0.62
XCR1-202ENST00000395946 MED14O60244 1454 aa11.15□□□□□ -0.62
XCR1-202ENST00000395946 KIF3BO15066 747 aa11.15□□□□□ -0.62
XCR1-202ENST00000395946 TSPY4P0CV99 314 aa11.15□□□□□ -0.62
XCR1-202ENST00000395946 TSPY10P0CW01 314 aa11.15□□□□□ -0.62
XCR1-202ENST00000395946 EIF2AK4Q9P2K8 1649 aaKnown RBP11.15□□□□□ -0.62
XCR1-202ENST00000395946 VPS8Q8N3P4 1428 aa11.15□□□□□ -0.62
XCR1-202ENST00000395946 MIA2Q96PC5 1412 aa11.15□□□□□ -0.62
XCR1-202ENST00000395946 POLR1AO95602 1720 aaPredicted RBP11.15□□□□□ -0.63
XCR1-202ENST00000395946 WASHC2CQ9Y4E1 1318 aa11.14□□□□□ -0.63
XCR1-202ENST00000395946 DEPDC5O75140 1603 aa11.14□□□□□ -0.63
XCR1-202ENST00000395946 RNF17Q9BXT8 1623 aaKnown RBP11.14□□□□□ -0.63
XCR1-202ENST00000395946 THEMISQ8N1K5 641 aaPredicted RBP11.14□□□□□ -0.63
XCR1-202ENST00000395946 LRRC9Q6ZRR7 1453 aa11.13□□□□□ -0.63
XCR1-202ENST00000395946 NEURL4Q96JN8 1562 aa11.13□□□□□ -0.63
XCR1-202ENST00000395946 UGGT1Q9NYU2 1555 aa11.12□□□□□ -0.63
XCR1-202ENST00000395946 UBAP1LF5GYI3 381 aa11.12□□□□□ -0.63
XCR1-202ENST00000395946 ANKLE2Q86XL3 938 aa11.12□□□□□ -0.63
XCR1-202ENST00000395946 SHANK2Q9UPX8 1470 aa11.12□□□□□ -0.63
XCR1-202ENST00000395946 ABCC3O15438 1527 aa11.1□□□□□ -0.63
XCR1-202ENST00000395946 TOM1O60784 492 aa11.1□□□□□ -0.63
XCR1-202ENST00000395946 NPHP4O75161 1426 aaPredicted RBP11.09□□□□□ -0.63
XCR1-202ENST00000395946 MYOM3Q5VTT5 1437 aa11.09□□□□□ -0.63
XCR1-202ENST00000395946 ILDR2Q71H61 639 aa11.09□□□□□ -0.63
XCR1-202ENST00000395946 DUOX2Q9NRD8 1548 aa11.09□□□□□ -0.63
XCR1-202ENST00000395946 ARHGAP31Q2M1Z3 1444 aa11.09□□□□□ -0.63
XCR1-202ENST00000395946 SYNMO15061 1565 aa11.08□□□□□ -0.64
XCR1-202ENST00000395946 VWDEQ8N2E2 1590 aa11.08□□□□□ -0.64
XCR1-202ENST00000395946 ERVK-7P63135 1459 aa11.08□□□□□ -0.64
XCR1-202ENST00000395946 ERBINQ96RT1 1412 aa11.08□□□□□ -0.64
XCR1-202ENST00000395946 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.07□□□□□ -0.64
XCR1-202ENST00000395946 FBXO31Q5XUX0 539 aaPredicted RBP11.07□□□□□ -0.64
XCR1-202ENST00000395946 PRDM15P57071 1507 aaPredicted RBP11.07□□□□□ -0.64
XCR1-202ENST00000395946 IQGAP1P46940 1657 aa11.06□□□□□ -0.64
XCR1-202ENST00000395946 MROH1Q8NDA8 1641 aa11.06□□□□□ -0.64
XCR1-202ENST00000395946 SLIT1O75093 1534 aa11.04□□□□□ -0.64
XCR1-202ENST00000395946 SCAF11Q99590 1463 aaKnown RBP11.03□□□□□ -0.64
XCR1-202ENST00000395946 ARHGAP23Q9P227 1491 aa11.03□□□□□ -0.64
XCR1-202ENST00000395946 KIF15Q9NS87 1388 aa11.02□□□□□ -0.65
XCR1-202ENST00000395946 KDM5AP29375 1690 aaKnown RBP11.01□□□□□ -0.65
XCR1-202ENST00000395946 LMTK2Q8IWU2 1503 aa11.01□□□□□ -0.65
XCR1-202ENST00000395946 MED1Q15648 1581 aaPredicted RBP11.01□□□□□ -0.65
XCR1-202ENST00000395946 CROCC2H7BZ55 1655 aa11.01□□□□□ -0.65
XCR1-202ENST00000395946 UBR1Q8IWV7 1749 aa11.01□□□□□ -0.65
XCR1-202ENST00000395946 LRRC7Q96NW7 1537 aa11□□□□□ -0.65
XCR1-202ENST00000395946 KANK1Q14678 1352 aa11□□□□□ -0.65
XCR1-202ENST00000395946 HSPA1LP34931 641 aa10.99□□□□□ -0.65
XCR1-202ENST00000395946 SCAF1Q9H7N4 1312 aaKnown RBP10.99□□□□□ -0.65
XCR1-202ENST00000395946 ABCC5O15440 1437 aa10.99□□□□□ -0.65
XCR1-202ENST00000395946 ALKQ9UM73 1620 aa10.98□□□□□ -0.65
XCR1-202ENST00000395946 PIP4K2BP78356 416 aa10.98□□□□□ -0.65
XCR1-202ENST00000395946 EID1Q9Y6B2 187 aa10.98□□□□□ -0.65
XCR1-202ENST00000395946 DAPK1P53355 1430 aa10.98□□□□□ -0.65
XCR1-202ENST00000395946 PTPN23Q9H3S7 1636 aa10.98□□□□□ -0.65
XCR1-202ENST00000395946 CEP152O94986 1710 aa10.98□□□□□ -0.65
XCR1-202ENST00000395946 APLP2Q06481 763 aa10.97□□□□□ -0.65
XCR1-202ENST00000395946 KANK4Q5T7N3 995 aaPredicted RBP10.97□□□□□ -0.65
XCR1-202ENST00000395946 ANKRD30AQ9BXX3 1397 aa10.97□□□□□ -0.65
XCR1-202ENST00000395946 FGD6Q6ZV73 1430 aa10.97□□□□□ -0.65
XCR1-202ENST00000395946 TMEM2Q9UHN6 1383 aa10.96□□□□□ -0.65
XCR1-202ENST00000395946 EFCAB6Q5THR3 1501 aa10.95□□□□□ -0.66
XCR1-202ENST00000395946 ADGRL2O95490 1459 aa10.95□□□□□ -0.66
XCR1-202ENST00000395946 RPRD2Q5VT52 1461 aaKnown RBP10.95□□□□□ -0.66
XCR1-202ENST00000395946 TXNDC2Q86VQ3 553 aa10.94□□□□□ -0.66
XCR1-202ENST00000395946 NOS1P29475 1434 aa10.93□□□□□ -0.66
XCR1-202ENST00000395946 PIK3C2BO00750 1634 aa10.93□□□□□ -0.66
XCR1-202ENST00000395946 NKTRP30414 1462 aaKnown RBP10.93□□□□□ -0.66
XCR1-202ENST00000395946 STRCP1A6NGW2 1772 aa10.93□□□□□ -0.66
XCR1-202ENST00000395946 FAM135BQ49AJ0 1406 aa10.92□□□□□ -0.66
XCR1-202ENST00000395946 SLC52A1Q9NWF4 448 aa10.92□□□□□ -0.66
XCR1-202ENST00000395946 ADGRB3O60242 1522 aa10.92□□□□□ -0.66
XCR1-202ENST00000395946 LTKP29376 864 aa10.91□□□□□ -0.66
XCR1-202ENST00000395946 RRP7BPQ9NSQ0 103 aa10.91□□□□□ -0.66
XCR1-202ENST00000395946 STAG3Q9UJ98 1225 aa10.91□□□□□ -0.66
XCR1-202ENST00000395946 NWD1Q149M9 1564 aa10.9□□□□□ -0.66
XCR1-202ENST00000395946 TET3O43151 1660 aa10.89□□□□□ -0.67
XCR1-202ENST00000395946 KCNA6P17658 529 aa10.89□□□□□ -0.67
XCR1-202ENST00000395946 LOC105371045A0A1W2PR82 267 aa10.88□□□□□ -0.67
XCR1-202ENST00000395946 HDGFP51858 240 aaKnown RBP10.88□□□□□ -0.67
XCR1-202ENST00000395946 ANKRD50Q9ULJ7 1429 aa10.88□□□□□ -0.67
XCR1-202ENST00000395946 NCOA3Q9Y6Q9 1424 aa10.88□□□□□ -0.67
XCR1-202ENST00000395946 IDI1Q13907 227 aa10.87□□□□□ -0.67
XCR1-202ENST00000395946 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.87□□□□□ -0.67
XCR1-202ENST00000395946 TMEM94Q12767 1356 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms