RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 CAMSAP1Q5T5Y3 1602 aa25.46■■□□□ 1.67
CXCL12-206ENST00000395795 RNF17Q9BXT8 1623 aaKnown RBP25.46■■□□□ 1.67
CXCL12-206ENST00000395795 TCOF1Q13428 1488 aaKnown RBP25.46■■□□□ 1.67
CXCL12-206ENST00000395795 CEP170BQ9Y4F5 1589 aaPredicted RBP25.45■■□□□ 1.66
CXCL12-206ENST00000395795 CERKQ8TCT0 537 aa25.45■■□□□ 1.66
CXCL12-206ENST00000395795 MROH1Q8NDA8 1641 aa25.45■■□□□ 1.66
CXCL12-206ENST00000395795 PTPN23Q9H3S7 1636 aa25.45■■□□□ 1.66
CXCL12-206ENST00000395795 FBXO31Q5XUX0 539 aaPredicted RBP25.44■■□□□ 1.66
CXCL12-206ENST00000395795 DMRT2Q9Y5R5 561 aa25.44■■□□□ 1.66
CXCL12-206ENST00000395795 PZPP20742 1482 aa25.44■■□□□ 1.66
CXCL12-206ENST00000395795 FGD6Q6ZV73 1430 aa25.44■■□□□ 1.66
CXCL12-206ENST00000395795 SHANK2Q9UPX8 1470 aa25.41■■□□□ 1.66
CXCL12-206ENST00000395795 CROCC2H7BZ55 1655 aa25.4■■□□□ 1.66
CXCL12-206ENST00000395795 APLP2Q06481 763 aa25.4■■□□□ 1.66
CXCL12-206ENST00000395795 EIF2AK4Q9P2K8 1649 aaKnown RBP25.4■■□□□ 1.66
CXCL12-206ENST00000395795 PLA2R1Q13018 1463 aa25.4■■□□□ 1.66
CXCL12-206ENST00000395795 WASHC2CQ9Y4E1 1318 aa25.39■■□□□ 1.66
CXCL12-206ENST00000395795 ABCC3O15438 1527 aa25.39■■□□□ 1.66
CXCL12-206ENST00000395795 A2ML1A8K2U0 1454 aa25.39■■□□□ 1.65
CXCL12-206ENST00000395795 DAPK1P53355 1430 aa25.38■■□□□ 1.65
CXCL12-206ENST00000395795 LTBP4Q8N2S1 1624 aa25.38■■□□□ 1.65
CXCL12-206ENST00000395795 NCKAP5LQ9HCH0 1330 aa25.37■■□□□ 1.65
CXCL12-206ENST00000395795 DUOX2Q9NRD8 1548 aa25.37■■□□□ 1.65
CXCL12-206ENST00000395795 DNMT1P26358 1616 aaKnown RBP25.37■■□□□ 1.65
CXCL12-206ENST00000395795 TNRQ92752 1358 aa25.37■■□□□ 1.65
CXCL12-206ENST00000395795 KIF15Q9NS87 1388 aa25.33■■□□□ 1.65
CXCL12-206ENST00000395795 ZC3H13Q5T200 1668 aaKnown RBP25.3■■□□□ 1.64
CXCL12-206ENST00000395795 ERBINQ96RT1 1412 aa25.29■■□□□ 1.64
CXCL12-206ENST00000395795 PKD2Q13563 968 aa25.29■■□□□ 1.64
CXCL12-206ENST00000395795 RRP7BPQ9NSQ0 103 aa25.29■■□□□ 1.64
CXCL12-206ENST00000395795 SPATA31D1Q6ZQQ2 1576 aa25.29■■□□□ 1.64
CXCL12-206ENST00000395795 PRDM15P57071 1507 aaPredicted RBP25.28■■□□□ 1.64
CXCL12-206ENST00000395795 ERVK-7P63135 1459 aa25.26■■□□□ 1.63
CXCL12-206ENST00000395795 NLRP1Q9C000 1473 aa25.26■■□□□ 1.63
CXCL12-206ENST00000395795 NEURL4Q96JN8 1562 aa25.26■■□□□ 1.63
CXCL12-206ENST00000395795 CEP152O94986 1710 aa25.26■■□□□ 1.63
CXCL12-206ENST00000395795 DEPDC5O75140 1603 aa25.25■■□□□ 1.63
CXCL12-206ENST00000395795 ADGRL2O95490 1459 aa25.23■■□□□ 1.63
CXCL12-206ENST00000395795 CHIC2Q9UKJ5 165 aa25.23■■□□□ 1.63
CXCL12-206ENST00000395795 ZNF335Q9H4Z2 1342 aaPredicted RBP25.22■■□□□ 1.63
CXCL12-206ENST00000395795 ARHGAP31Q2M1Z3 1444 aa25.2■■□□□ 1.63
CXCL12-206ENST00000395795 VWDEQ8N2E2 1590 aa25.2■■□□□ 1.62
CXCL12-206ENST00000395795 ANKRD30AQ9BXX3 1397 aa25.19■■□□□ 1.62
CXCL12-206ENST00000395795 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.19■■□□□ 1.62
CXCL12-206ENST00000395795 UGGT1Q9NYU2 1555 aa25.19■■□□□ 1.62
CXCL12-206ENST00000395795 IQSEC2Q5JU85 1478 aa25.17■■□□□ 1.62
CXCL12-206ENST00000395795 POLR1AO95602 1720 aaPredicted RBP25.16■■□□□ 1.62
CXCL12-206ENST00000395795 LMTK2Q8IWU2 1503 aa25.15■■□□□ 1.62
CXCL12-206ENST00000395795 FAM50AQ14320 339 aaKnown RBP25.14■■□□□ 1.62
CXCL12-206ENST00000395795 THEMISQ8N1K5 641 aaPredicted RBP25.14■■□□□ 1.62
CXCL12-206ENST00000395795 MED14O60244 1454 aa25.14■■□□□ 1.61
CXCL12-206ENST00000395795 CFAP65Q6ZU64 1925 aaKnown RBP25.12■■□□□ 1.61
CXCL12-206ENST00000395795 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.11■■□□□ 1.61
CXCL12-206ENST00000395795 UBR1Q8IWV7 1749 aa25.09■■□□□ 1.61
CXCL12-206ENST00000395795 ANKLE2Q86XL3 938 aa25.09■■□□□ 1.61
CXCL12-206ENST00000395795 NPHP4O75161 1426 aaPredicted RBP25.07■■□□□ 1.6
CXCL12-206ENST00000395795 ANKRD50Q9ULJ7 1429 aa25.07■■□□□ 1.6
CXCL12-206ENST00000395795 ARHGAP23Q9P227 1491 aa25.06■■□□□ 1.6
CXCL12-206ENST00000395795 KANK1Q14678 1352 aa25.04■■□□□ 1.6
CXCL12-206ENST00000395795 NOS1P29475 1434 aa25.03■■□□□ 1.6
CXCL12-206ENST00000395795 EFCAB6Q5THR3 1501 aa25.03■■□□□ 1.6
CXCL12-206ENST00000395795 SYNMO15061 1565 aa25.03■■□□□ 1.6
CXCL12-206ENST00000395795 SLIT1O75093 1534 aa25.02■■□□□ 1.6
CXCL12-206ENST00000395795 PPARGC1BQ86YN6 1023 aaKnown RBP25.02■■□□□ 1.6
CXCL12-206ENST00000395795 PIK3C2BO00750 1634 aa25.01■■□□□ 1.59
CXCL12-206ENST00000395795 IQGAP1P46940 1657 aa25.01■■□□□ 1.59
CXCL12-206ENST00000395795 LTKP29376 864 aa25■■□□□ 1.59
CXCL12-206ENST00000395795 ROCK1Q13464 1354 aa25■■□□□ 1.59
CXCL12-206ENST00000395795 IDI1Q13907 227 aa24.98■■□□□ 1.59
CXCL12-206ENST00000395795 CPS1P31327 1500 aa24.97■■□□□ 1.59
CXCL12-206ENST00000395795 UNC13BO14795 1591 aa24.97■■□□□ 1.59
CXCL12-206ENST00000395795 SCAF11Q99590 1463 aaKnown RBP24.96■■□□□ 1.59
CXCL12-206ENST00000395795 STRCP1A6NGW2 1772 aa24.96■■□□□ 1.59
CXCL12-206ENST00000395795 KDM5AP29375 1690 aaKnown RBP24.94■■□□□ 1.58
CXCL12-206ENST00000395795 TMEM2Q9UHN6 1383 aa24.93■■□□□ 1.58
CXCL12-206ENST00000395795 TET3O43151 1660 aa24.92■■□□□ 1.58
CXCL12-206ENST00000395795 RPRD2Q5VT52 1461 aaKnown RBP24.92■■□□□ 1.58
CXCL12-206ENST00000395795 ALKQ9UM73 1620 aa24.91■■□□□ 1.58
CXCL12-206ENST00000395795 UBAP1LF5GYI3 381 aa24.9■■□□□ 1.58
CXCL12-206ENST00000395795 TXNDC2Q86VQ3 553 aa24.9■■□□□ 1.58
CXCL12-206ENST00000395795 RRBP1Q9P2E9 1410 aaKnown RBP24.88■■□□□ 1.57
CXCL12-206ENST00000395795 ADGRB3O60242 1522 aa24.87■■□□□ 1.57
CXCL12-206ENST00000395795 LRRC7Q96NW7 1537 aa24.86■■□□□ 1.57
CXCL12-206ENST00000395795 GCC2Q8IWJ2 1684 aa24.85■■□□□ 1.57
CXCL12-206ENST00000395795 SLC52A1Q9NWF4 448 aa24.85■■□□□ 1.57
CXCL12-206ENST00000395795 IQGAP3Q86VI3 1631 aa24.85■■□□□ 1.57
CXCL12-206ENST00000395795 E9PCH4 1651 aa24.84■■□□□ 1.57
CXCL12-206ENST00000395795 ITGAEP38570 1179 aa24.83■■□□□ 1.57
CXCL12-206ENST00000395795 ZFYVE9O95405 1425 aa24.8■■□□□ 1.56
CXCL12-206ENST00000395795 EID1Q9Y6B2 187 aa24.8■■□□□ 1.56
CXCL12-206ENST00000395795 TMEM131LA2VDJ0 1609 aa24.79■■□□□ 1.56
CXCL12-206ENST00000395795 STAG3Q9UJ98 1225 aa24.78■■□□□ 1.56
CXCL12-206ENST00000395795 NUP155O75694 1391 aa24.78■■□□□ 1.56
CXCL12-206ENST00000395795 MYO5BQ9ULV0 1848 aa24.77■■□□□ 1.56
CXCL12-206ENST00000395795 XIRP1Q702N8 1843 aaKnown RBP24.75■■□□□ 1.55
CXCL12-206ENST00000395795 NAIPQ13075 1403 aa24.73■■□□□ 1.55
CXCL12-206ENST00000395795 TOM1O60784 492 aa24.73■■□□□ 1.55
CXCL12-206ENST00000395795 HSPA1LP34931 641 aa24.71■■□□□ 1.55
CXCL12-206ENST00000395795 SLC26A8Q96RN1 970 aa24.71■■□□□ 1.55
CXCL12-206ENST00000395795 RIMS2Q9UQ26 1411 aa24.7■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms