RNA–Protein interactions for RNA: ENST00000395736.7

TOM1-202, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-202ENST00000395736 PHF23Q9BUL5 403 aaPredicted RBP17.47■□□□□ 0.39
TOM1-202ENST00000395736 MYOM3Q5VTT5 1437 aa17.46■□□□□ 0.39
TOM1-202ENST00000395736 MYO3AQ8NEV4 1616 aa17.45■□□□□ 0.38
TOM1-202ENST00000395736 MAST1Q9Y2H9 1570 aa17.45■□□□□ 0.38
TOM1-202ENST00000395736 PLA2R1Q13018 1463 aa17.44■□□□□ 0.38
TOM1-202ENST00000395736 RGS17Q9UGC6 210 aaPredicted RBP17.44■□□□□ 0.38
TOM1-202ENST00000395736 DHX29Q7Z478 1369 aaKnown RBP17.43■□□□□ 0.38
TOM1-202ENST00000395736 NPATQ14207 1427 aa17.43■□□□□ 0.38
TOM1-202ENST00000395736 MIA2Q96PC5 1412 aa17.42■□□□□ 0.38
TOM1-202ENST00000395736 ZMYM3Q14202 1370 aa17.41■□□□□ 0.38
TOM1-202ENST00000395736 ESF1Q9H501 851 aaKnown RBP17.41■□□□□ 0.38
TOM1-202ENST00000395736 CEP170BQ9Y4F5 1589 aaPredicted RBP17.4■□□□□ 0.38
TOM1-202ENST00000395736 CROCC2H7BZ55 1655 aa17.4■□□□□ 0.38
TOM1-202ENST00000395736 PKD2Q13563 968 aa17.39■□□□□ 0.37
TOM1-202ENST00000395736 GGT6Q6P531 493 aa17.39■□□□□ 0.37
TOM1-202ENST00000395736 PTPRKQ15262 1439 aa17.38■□□□□ 0.37
TOM1-202ENST00000395736 RSPH4AQ5TD94 716 aa17.38■□□□□ 0.37
TOM1-202ENST00000395736 PTPN23Q9H3S7 1636 aa17.38■□□□□ 0.37
TOM1-202ENST00000395736 RNF17Q9BXT8 1623 aaKnown RBP17.37■□□□□ 0.37
TOM1-202ENST00000395736 TOM1O60784 492 aa17.37■□□□□ 0.37
TOM1-202ENST00000395736 KDM5DQ9BY66 1539 aa17.37■□□□□ 0.37
TOM1-202ENST00000395736 FAM135AQ9P2D6 1515 aa17.37■□□□□ 0.37
TOM1-202ENST00000395736 PPP6R1Q9UPN7 881 aa17.36■□□□□ 0.37
TOM1-202ENST00000395736 CPS1P31327 1500 aa17.36■□□□□ 0.37
TOM1-202ENST00000395736 NEURL4Q96JN8 1562 aa17.36■□□□□ 0.37
TOM1-202ENST00000395736 MROH1Q8NDA8 1641 aa17.35■□□□□ 0.37
TOM1-202ENST00000395736 EIF2AK4Q9P2K8 1649 aaKnown RBP17.35■□□□□ 0.37
TOM1-202ENST00000395736 POLR1AO95602 1720 aaPredicted RBP17.35■□□□□ 0.37
TOM1-202ENST00000395736 DNMT1P26358 1616 aaKnown RBP17.33■□□□□ 0.37
TOM1-202ENST00000395736 KIF3BO15066 747 aa17.33■□□□□ 0.36
TOM1-202ENST00000395736 SHANK2Q9UPX8 1470 aa17.32■□□□□ 0.36
TOM1-202ENST00000395736 FGD6Q6ZV73 1430 aa17.32■□□□□ 0.36
TOM1-202ENST00000395736 TSPY4P0CV99 314 aa17.32■□□□□ 0.36
TOM1-202ENST00000395736 TSPY10P0CW01 314 aa17.32■□□□□ 0.36
TOM1-202ENST00000395736 ABCC5O15440 1437 aa17.31■□□□□ 0.36
TOM1-202ENST00000395736 SETD1AO15047 1707 aaKnown RBP17.31■□□□□ 0.36
TOM1-202ENST00000395736 SENP3Q9H4L4 574 aaPredicted RBP17.31■□□□□ 0.36
TOM1-202ENST00000395736 VWDEQ8N2E2 1590 aa17.31■□□□□ 0.36
TOM1-202ENST00000395736 PZPP20742 1482 aa17.31■□□□□ 0.36
TOM1-202ENST00000395736 ZC3H13Q5T200 1668 aaKnown RBP17.3■□□□□ 0.36
TOM1-202ENST00000395736 SRCAPQ6ZRS2 3230 aa17.3■□□□□ 0.36
TOM1-202ENST00000395736 APLP2Q06481 763 aa17.29■□□□□ 0.36
TOM1-202ENST00000395736 DUOX2Q9NRD8 1548 aa17.29■□□□□ 0.36
TOM1-202ENST00000395736 DAPK1P53355 1430 aa17.29■□□□□ 0.36
TOM1-202ENST00000395736 STRCP1A6NGW2 1772 aa17.28■□□□□ 0.36
TOM1-202ENST00000395736 ABCC3O15438 1527 aa17.28■□□□□ 0.36
TOM1-202ENST00000395736 CEP152O94986 1710 aa17.27■□□□□ 0.36
TOM1-202ENST00000395736 POTEAQ6S8J7 498 aa17.26■□□□□ 0.35
TOM1-202ENST00000395736 A2ML1A8K2U0 1454 aa17.25■□□□□ 0.35
TOM1-202ENST00000395736 PRDM15P57071 1507 aaPredicted RBP17.25■□□□□ 0.35
TOM1-202ENST00000395736 DEPDC5O75140 1603 aa17.25■□□□□ 0.35
TOM1-202ENST00000395736 FBXO31Q5XUX0 539 aaPredicted RBP17.24■□□□□ 0.35
TOM1-202ENST00000395736 KIF15Q9NS87 1388 aa17.24■□□□□ 0.35
TOM1-202ENST00000395736 WASHC2CQ9Y4E1 1318 aa17.23■□□□□ 0.35
TOM1-202ENST00000395736 TNRQ92752 1358 aa17.23■□□□□ 0.35
TOM1-202ENST00000395736 ERBINQ96RT1 1412 aa17.22■□□□□ 0.35
TOM1-202ENST00000395736 ADGRL2O95490 1459 aa17.18■□□□□ 0.34
TOM1-202ENST00000395736 ERVK-7P63135 1459 aa17.18■□□□□ 0.34
TOM1-202ENST00000395736 LRRC7Q96NW7 1537 aa17.17■□□□□ 0.34
TOM1-202ENST00000395736 RRP7BPQ9NSQ0 103 aa17.17■□□□□ 0.34
TOM1-202ENST00000395736 NLRP1Q9C000 1473 aa17.17■□□□□ 0.34
TOM1-202ENST00000395736 UGGT1Q9NYU2 1555 aa17.15■□□□□ 0.34
TOM1-202ENST00000395736 CHIC2Q9UKJ5 165 aa17.14■□□□□ 0.33
TOM1-202ENST00000395736 XIRP1Q702N8 1843 aaKnown RBP17.14■□□□□ 0.33
TOM1-202ENST00000395736 ANKRD30AQ9BXX3 1397 aa17.14■□□□□ 0.33
TOM1-202ENST00000395736 ARHGAP31Q2M1Z3 1444 aa17.13■□□□□ 0.33
TOM1-202ENST00000395736 LMTK2Q8IWU2 1503 aa17.12■□□□□ 0.33
TOM1-202ENST00000395736 CFAP65Q6ZU64 1925 aaKnown RBP17.12■□□□□ 0.33
TOM1-202ENST00000395736 UBR1Q8IWV7 1749 aa17.12■□□□□ 0.33
TOM1-202ENST00000395736 MED14O60244 1454 aa17.12■□□□□ 0.33
TOM1-202ENST00000395736 SYNMO15061 1565 aa17.11■□□□□ 0.33
TOM1-202ENST00000395736 IQGAP1P46940 1657 aa17.11■□□□□ 0.33
TOM1-202ENST00000395736 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.11■□□□□ 0.33
TOM1-202ENST00000395736 FAM50AQ14320 339 aaKnown RBP17.1■□□□□ 0.33
TOM1-202ENST00000395736 NPHP4O75161 1426 aaPredicted RBP17.09■□□□□ 0.33
TOM1-202ENST00000395736 EFCAB6Q5THR3 1501 aa17.08■□□□□ 0.32
TOM1-202ENST00000395736 PIK3C2BO00750 1634 aa17.07■□□□□ 0.32
TOM1-202ENST00000395736 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.06■□□□□ 0.32
TOM1-202ENST00000395736 ANKRD50Q9ULJ7 1429 aa17.05■□□□□ 0.32
TOM1-202ENST00000395736 UNC13BO14795 1591 aa17.05■□□□□ 0.32
TOM1-202ENST00000395736 ANKLE2Q86XL3 938 aa17.04■□□□□ 0.32
TOM1-202ENST00000395736 UPF1Q92900 1129 aaKnown RBP eCLIP17.04■□□□□ 0.32
TOM1-202ENST00000395736 KANK1Q14678 1352 aa17.03■□□□□ 0.32
TOM1-202ENST00000395736 THEMISQ8N1K5 641 aaPredicted RBP17.03■□□□□ 0.32
TOM1-202ENST00000395736 SLIT1O75093 1534 aa17.02■□□□□ 0.32
TOM1-202ENST00000395736 ARHGAP23Q9P227 1491 aa17.02■□□□□ 0.32
TOM1-202ENST00000395736 PPARGC1BQ86YN6 1023 aaKnown RBP17.02■□□□□ 0.32
TOM1-202ENST00000395736 TET3O43151 1660 aa17.01■□□□□ 0.31
TOM1-202ENST00000395736 KDM5AP29375 1690 aaKnown RBP17.01■□□□□ 0.31
TOM1-202ENST00000395736 NOS1P29475 1434 aa17.01■□□□□ 0.31
TOM1-202ENST00000395736 GCC2Q8IWJ2 1684 aa17■□□□□ 0.31
TOM1-202ENST00000395736 ROCK1Q13464 1354 aa17■□□□□ 0.31
TOM1-202ENST00000395736 SCAF11Q99590 1463 aaKnown RBP16.98■□□□□ 0.31
TOM1-202ENST00000395736 ROBO1Q9Y6N7 1651 aa16.97■□□□□ 0.31
TOM1-202ENST00000395736 IQGAP3Q86VI3 1631 aa16.97■□□□□ 0.31
TOM1-202ENST00000395736 FAM135BQ49AJ0 1406 aa16.96■□□□□ 0.31
TOM1-202ENST00000395736 ADGRB3O60242 1522 aa16.96■□□□□ 0.31
TOM1-202ENST00000395736 RPRD2Q5VT52 1461 aaKnown RBP16.96■□□□□ 0.31
TOM1-202ENST00000395736 E9PCH4 1651 aa16.96■□□□□ 0.31
TOM1-202ENST00000395736 RRBP1Q9P2E9 1410 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms