RNA–Protein interactions for RNA: ENST00000395725.7

PTPN20-207, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 5 BASIC

Gene PTPN20, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-207ENST00000395725 PTPRKQ15262 1439 aa17.96■□□□□ 0.46
PTPN20-207ENST00000395725 CEBPAP49715 358 aaPredicted RBP17.95■□□□□ 0.46
PTPN20-207ENST00000395725 KIF3BO15066 747 aa17.95■□□□□ 0.46
PTPN20-207ENST00000395725 GGT6Q6P531 493 aa17.95■□□□□ 0.46
PTPN20-207ENST00000395725 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.94■□□□□ 0.46
PTPN20-207ENST00000395725 ADGRL2O95490 1459 aa17.94■□□□□ 0.46
PTPN20-207ENST00000395725 ZNF142P52746 1687 aaPredicted RBP17.93■□□□□ 0.46
PTPN20-207ENST00000395725 DMRT2Q9Y5R5 561 aa17.92■□□□□ 0.46
PTPN20-207ENST00000395725 ANKRD30AQ9BXX3 1397 aa17.92■□□□□ 0.46
PTPN20-207ENST00000395725 PZPP20742 1482 aa17.92■□□□□ 0.46
PTPN20-207ENST00000395725 KIF15Q9NS87 1388 aa17.9■□□□□ 0.46
PTPN20-207ENST00000395725 DEPDC5O75140 1603 aa17.88■□□□□ 0.45
PTPN20-207ENST00000395725 PLPPR3Q6T4P5 718 aa17.88■□□□□ 0.45
PTPN20-207ENST00000395725 PTPRTO14522 1441 aa17.88■□□□□ 0.45
PTPN20-207ENST00000395725 WASHC2CQ9Y4E1 1318 aa17.88■□□□□ 0.45
PTPN20-207ENST00000395725 MYO3AQ8NEV4 1616 aa17.88■□□□□ 0.45
PTPN20-207ENST00000395725 PRDM15P57071 1507 aaPredicted RBP17.88■□□□□ 0.45
PTPN20-207ENST00000395725 NCOA1Q15788 1441 aa17.87■□□□□ 0.45
PTPN20-207ENST00000395725 MROH1Q8NDA8 1641 aa17.87■□□□□ 0.45
PTPN20-207ENST00000395725 PLA2R1Q13018 1463 aa17.87■□□□□ 0.45
PTPN20-207ENST00000395725 ABCC3O15438 1527 aa17.87■□□□□ 0.45
PTPN20-207ENST00000395725 ARHGAP31Q2M1Z3 1444 aa17.85■□□□□ 0.45
PTPN20-207ENST00000395725 A2ML1A8K2U0 1454 aa17.85■□□□□ 0.45
PTPN20-207ENST00000395725 STRCQ7RTU9 1775 aa17.85■□□□□ 0.45
PTPN20-207ENST00000395725 CEP170BQ9Y4F5 1589 aaPredicted RBP17.85■□□□□ 0.45
PTPN20-207ENST00000395725 HSPA2P54652 639 aa17.84■□□□□ 0.45
PTPN20-207ENST00000395725 NLRP1Q9C000 1473 aa17.84■□□□□ 0.45
PTPN20-207ENST00000395725 ROCK1Q13464 1354 aa17.84■□□□□ 0.45
PTPN20-207ENST00000395725 LMTK2Q8IWU2 1503 aa17.84■□□□□ 0.45
PTPN20-207ENST00000395725 SPATA31D1Q6ZQQ2 1576 aa17.83■□□□□ 0.44
PTPN20-207ENST00000395725 TNRQ92752 1358 aa17.83■□□□□ 0.44
PTPN20-207ENST00000395725 KANK1Q14678 1352 aa17.82■□□□□ 0.44
PTPN20-207ENST00000395725 VWDEQ8N2E2 1590 aa17.81■□□□□ 0.44
PTPN20-207ENST00000395725 CAMSAP1Q5T5Y3 1602 aa17.81■□□□□ 0.44
PTPN20-207ENST00000395725 PKD2Q13563 968 aa17.8■□□□□ 0.44
PTPN20-207ENST00000395725 RRP7BPQ9NSQ0 103 aa17.8■□□□□ 0.44
PTPN20-207ENST00000395725 FAM50AQ14320 339 aaKnown RBP17.79■□□□□ 0.44
PTPN20-207ENST00000395725 CEP152O94986 1710 aa17.77■□□□□ 0.44
PTPN20-207ENST00000395725 ERVK-7P63135 1459 aa17.77■□□□□ 0.43
PTPN20-207ENST00000395725 RRBP1Q9P2E9 1410 aaKnown RBP17.76■□□□□ 0.43
PTPN20-207ENST00000395725 ANKRD50Q9ULJ7 1429 aa17.76■□□□□ 0.43
PTPN20-207ENST00000395725 THEMISQ8N1K5 641 aaPredicted RBP17.72■□□□□ 0.43
PTPN20-207ENST00000395725 CHIC2Q9UKJ5 165 aa17.72■□□□□ 0.43
PTPN20-207ENST00000395725 RPRD2Q5VT52 1461 aaKnown RBP17.72■□□□□ 0.43
PTPN20-207ENST00000395725 KDM5AP29375 1690 aaKnown RBP17.72■□□□□ 0.43
PTPN20-207ENST00000395725 UNC13BO14795 1591 aa17.72■□□□□ 0.43
PTPN20-207ENST00000395725 FBXO31Q5XUX0 539 aaPredicted RBP17.72■□□□□ 0.43
PTPN20-207ENST00000395725 IQSEC2Q5JU85 1478 aa17.71■□□□□ 0.43
PTPN20-207ENST00000395725 UGGT1Q9NYU2 1555 aa17.7■□□□□ 0.42
PTPN20-207ENST00000395725 POLR1AO95602 1720 aaPredicted RBP17.7■□□□□ 0.42
PTPN20-207ENST00000395725 FBXO41Q8TF61 875 aa17.7■□□□□ 0.42
PTPN20-207ENST00000395725 EFCAB6Q5THR3 1501 aa17.69■□□□□ 0.42
PTPN20-207ENST00000395725 TET3O43151 1660 aa17.68■□□□□ 0.42
PTPN20-207ENST00000395725 MED14O60244 1454 aa17.67■□□□□ 0.42
PTPN20-207ENST00000395725 GCC2Q8IWJ2 1684 aa17.67■□□□□ 0.42
PTPN20-207ENST00000395725 CERKQ8TCT0 537 aa17.66■□□□□ 0.42
PTPN20-207ENST00000395725 NOS1P29475 1434 aa17.66■□□□□ 0.42
PTPN20-207ENST00000395725 ANKLE2Q86XL3 938 aa17.65■□□□□ 0.42
PTPN20-207ENST00000395725 UBR1Q8IWV7 1749 aa17.65■□□□□ 0.42
PTPN20-207ENST00000395725 IQGAP3Q86VI3 1631 aa17.64■□□□□ 0.41
PTPN20-207ENST00000395725 LTBP4Q8N2S1 1624 aa17.63■□□□□ 0.41
PTPN20-207ENST00000395725 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.63■□□□□ 0.41
PTPN20-207ENST00000395725 SLIT1O75093 1534 aa17.63■□□□□ 0.41
PTPN20-207ENST00000395725 ARHGAP23Q9P227 1491 aa17.63■□□□□ 0.41
PTPN20-207ENST00000395725 NCKAP5LQ9HCH0 1330 aa17.63■□□□□ 0.41
PTPN20-207ENST00000395725 ILDR1Q86SU0 546 aaPredicted RBP17.63■□□□□ 0.41
PTPN20-207ENST00000395725 SLC52A1Q9NWF4 448 aa17.63■□□□□ 0.41
PTPN20-207ENST00000395725 NEURL4Q96JN8 1562 aa17.62■□□□□ 0.41
PTPN20-207ENST00000395725 ACIN1Q9UKV3 1341 aaKnown RBP17.6■□□□□ 0.41
PTPN20-207ENST00000395725 CFAP65Q6ZU64 1925 aaKnown RBP17.59■□□□□ 0.41
PTPN20-207ENST00000395725 SYNMO15061 1565 aa17.58■□□□□ 0.41
PTPN20-207ENST00000395725 NPHP4O75161 1426 aaPredicted RBP17.58■□□□□ 0.4
PTPN20-207ENST00000395725 PIK3C2BO00750 1634 aa17.58■□□□□ 0.4
PTPN20-207ENST00000395725 CPS1P31327 1500 aa17.57■□□□□ 0.4
PTPN20-207ENST00000395725 IQGAP1P46940 1657 aa17.56■□□□□ 0.4
PTPN20-207ENST00000395725 SCAF11Q99590 1463 aaKnown RBP17.55■□□□□ 0.4
PTPN20-207ENST00000395725 ADGRB3O60242 1522 aa17.55■□□□□ 0.4
PTPN20-207ENST00000395725 HFM1A2PYH4 1435 aa17.55■□□□□ 0.4
PTPN20-207ENST00000395725 E9PCH4 1651 aa17.53■□□□□ 0.4
PTPN20-207ENST00000395725 NAIPQ13075 1403 aa17.53■□□□□ 0.4
PTPN20-207ENST00000395725 TMEM2Q9UHN6 1383 aa17.53■□□□□ 0.4
PTPN20-207ENST00000395725 NUP155O75694 1391 aa17.53■□□□□ 0.4
PTPN20-207ENST00000395725 PPARGC1BQ86YN6 1023 aaKnown RBP17.53■□□□□ 0.4
PTPN20-207ENST00000395725 EID1Q9Y6B2 187 aa17.53■□□□□ 0.4
PTPN20-207ENST00000395725 IDI1Q13907 227 aa17.52■□□□□ 0.4
PTPN20-207ENST00000395725 HDGFP51858 240 aaKnown RBP17.51■□□□□ 0.39
PTPN20-207ENST00000395725 ITGAEP38570 1179 aa17.49■□□□□ 0.39
PTPN20-207ENST00000395725 STAG3Q9UJ98 1225 aa17.49■□□□□ 0.39
PTPN20-207ENST00000395725 TXNDC2Q86VQ3 553 aa17.48■□□□□ 0.39
PTPN20-207ENST00000395725 ZNF335Q9H4Z2 1342 aaPredicted RBP17.47■□□□□ 0.39
PTPN20-207ENST00000395725 TMEM131LA2VDJ0 1609 aa17.47■□□□□ 0.39
PTPN20-207ENST00000395725 SPHKAPQ2M3C7 1700 aa17.45■□□□□ 0.38
PTPN20-207ENST00000395725 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.45■□□□□ 0.38
PTPN20-207ENST00000395725 ZFYVE9O95405 1425 aa17.44■□□□□ 0.38
PTPN20-207ENST00000395725 LTKP29376 864 aa17.44■□□□□ 0.38
PTPN20-207ENST00000395725 PLEKHG1Q9ULL1 1385 aa17.41■□□□□ 0.38
PTPN20-207ENST00000395725 TRPM2O94759 1503 aa17.41■□□□□ 0.38
PTPN20-207ENST00000395725 RIMS2Q9UQ26 1411 aa17.4■□□□□ 0.38
PTPN20-207ENST00000395725 DIP2AQ14689 1571 aa17.39■□□□□ 0.37
PTPN20-207ENST00000395725 MYO5BQ9ULV0 1848 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms