RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 JPH4Q96JJ6 628 aa11.07□□□□□ -0.64
CDKN3-203ENST00000395577 KDM4FA0A1W2PPD8 638 aa11.06□□□□□ -0.64
CDKN3-203ENST00000395577 GIGYF2Q6Y7W6 1299 aaKnown RBP11.05□□□□□ -0.64
CDKN3-203ENST00000395577 FOSBP53539 338 aa11.04□□□□□ -0.64
CDKN3-203ENST00000395577 REPIN1Q9BWE0 567 aaKnown RBP11.03□□□□□ -0.64
CDKN3-203ENST00000395577 MS4A1P11836 297 aa11.01□□□□□ -0.65
CDKN3-203ENST00000395577 CLCN1P35523 988 aa11.01□□□□□ -0.65
CDKN3-203ENST00000395577 DOK7Q18PE1 504 aa11.01□□□□□ -0.65
CDKN3-203ENST00000395577 ZNF454Q8N9F8 522 aa11.01□□□□□ -0.65
CDKN3-203ENST00000395577 SUPT5HO00267 1087 aaKnown RBP11□□□□□ -0.65
CDKN3-203ENST00000395577 NUDT7P0C024 238 aa11□□□□□ -0.65
CDKN3-203ENST00000395577 MDM2Q00987 491 aaPredicted RBP11□□□□□ -0.65
CDKN3-203ENST00000395577 C6orf132Q5T0Z8 1188 aa11□□□□□ -0.65
CDKN3-203ENST00000395577 CERKQ8TCT0 537 aa11□□□□□ -0.65
CDKN3-203ENST00000395577 ZDHHC16Q969W1 377 aa11□□□□□ -0.65
CDKN3-203ENST00000395577 ARSIQ5FYB1 569 aa10.99□□□□□ -0.65
CDKN3-203ENST00000395577 PHOX2BQ99453 314 aa10.99□□□□□ -0.65
CDKN3-203ENST00000395577 TMUB1Q9BVT8 246 aa10.99□□□□□ -0.65
CDKN3-203ENST00000395577 GPCPD1Q9NPB8 672 aa10.99□□□□□ -0.65
CDKN3-203ENST00000395577 PADI6Q6TGC4 694 aa10.98□□□□□ -0.65
CDKN3-203ENST00000395577 KHSRPQ92945 711 aaKnown RBP eCLIP10.98□□□□□ -0.65
CDKN3-203ENST00000395577 RIMBP2O15034 1052 aa10.97□□□□□ -0.65
CDKN3-203ENST00000395577 POTEJP0CG39 1038 aa10.97□□□□□ -0.65
CDKN3-203ENST00000395577 HOXB3P14651 431 aaPredicted RBP10.97□□□□□ -0.65
CDKN3-203ENST00000395577 FAM161AQ3B820 660 aa10.97□□□□□ -0.65
CDKN3-203ENST00000395577 GOPCQ9HD26 462 aa10.97□□□□□ -0.65
CDKN3-203ENST00000395577 OATP04181 439 aa10.96□□□□□ -0.65
CDKN3-203ENST00000395577 ADAM33Q9BZ11 813 aa10.96□□□□□ -0.65
CDKN3-203ENST00000395577 ARXQ96QS3 562 aa10.95□□□□□ -0.66
CDKN3-203ENST00000395577 ZSWIM6Q9HCJ5 1215 aa10.95□□□□□ -0.66
CDKN3-203ENST00000395577 SSTR3P32745 418 aaPredicted RBP10.94□□□□□ -0.66
CDKN3-203ENST00000395577 METTL3Q86U44 580 aaKnown RBP10.94□□□□□ -0.66
CDKN3-203ENST00000395577 PCMTD1Q96MG8 357 aaPredicted RBP10.94□□□□□ -0.66
CDKN3-203ENST00000395577 ZMYND15Q9H091 742 aa10.94□□□□□ -0.66
CDKN3-203ENST00000395577 GPR153Q6NV75 609 aa10.93□□□□□ -0.66
CDKN3-203ENST00000395577 ZNF710Q8N1W2 664 aa10.93□□□□□ -0.66
CDKN3-203ENST00000395577 RBM27Q9P2N5 1060 aaKnown RBP10.93□□□□□ -0.66
CDKN3-203ENST00000395577 ADGRG1Q9Y653 693 aa10.93□□□□□ -0.66
CDKN3-203ENST00000395577 POTEB2H3BUK9 544 aa10.92□□□□□ -0.66
CDKN3-203ENST00000395577 SCUBE2Q9NQ36 999 aa10.92□□□□□ -0.66
CDKN3-203ENST00000395577 PRSS12P56730 875 aa10.91□□□□□ -0.66
CDKN3-203ENST00000395577 TTC13Q8NBP0 860 aa10.91□□□□□ -0.66
CDKN3-203ENST00000395577 PXYLP1Q8TE99 480 aa10.91□□□□□ -0.66
CDKN3-203ENST00000395577 NLRP7Q8WX94 980 aa10.91□□□□□ -0.66
CDKN3-203ENST00000395577 SH3D19Q5HYK7 790 aa10.9□□□□□ -0.66
CDKN3-203ENST00000395577 MAMSTRQ6ZN01 415 aa10.89□□□□□ -0.67
CDKN3-203ENST00000395577 CDCA7LQ96GN5 454 aa10.89□□□□□ -0.67
CDKN3-203ENST00000395577 BEGAINQ9BUH8 593 aa10.89□□□□□ -0.67
CDKN3-203ENST00000395577 FAM217BQ9NTX9 383 aaPredicted RBP10.89□□□□□ -0.67
CDKN3-203ENST00000395577 LHX6Q9UPM6 363 aa10.89□□□□□ -0.67
CDKN3-203ENST00000395577 RSPH6AQ9H0K4 717 aa10.88□□□□□ -0.67
CDKN3-203ENST00000395577 FLIIQ13045 1269 aa10.87□□□□□ -0.67
CDKN3-203ENST00000395577 PPP4R3BQ5MIZ7 849 aa10.87□□□□□ -0.67
CDKN3-203ENST00000395577 RBM46Q8TBY0 533 aaKnown RBP10.87□□□□□ -0.67
CDKN3-203ENST00000395577 PSDA5PKW4 1024 aaPredicted RBP10.85□□□□□ -0.67
CDKN3-203ENST00000395577 SKIV2LQ15477 1246 aaKnown RBP10.85□□□□□ -0.67
CDKN3-203ENST00000395577 ATP1B4Q9UN42 357 aaPredicted RBP10.84□□□□□ -0.67
CDKN3-203ENST00000395577 COL9A1P20849 921 aa10.83□□□□□ -0.68
CDKN3-203ENST00000395577 HOMEZQ8IX15 550 aa10.83□□□□□ -0.68
CDKN3-203ENST00000395577 BCL2L12Q9HB09 334 aa10.83□□□□□ -0.68
CDKN3-203ENST00000395577 FAM198AQ9UFP1 575 aa10.82□□□□□ -0.68
CDKN3-203ENST00000395577 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.81□□□□□ -0.68
CDKN3-203ENST00000395577 PTPREP23469 700 aa10.81□□□□□ -0.68
CDKN3-203ENST00000395577 ONECUT3O60422 494 aaPredicted RBP10.8□□□□□ -0.68
CDKN3-203ENST00000395577 POLR3EQ9NVU0 708 aa10.8□□□□□ -0.68
CDKN3-203ENST00000395577 RCCD1A6NED2 376 aa10.79□□□□□ -0.68
CDKN3-203ENST00000395577 PPP1R3GB7ZBB8 358 aa10.79□□□□□ -0.68
CDKN3-203ENST00000395577 SNPHO15079 494 aa10.79□□□□□ -0.68
CDKN3-203ENST00000395577 PROCA1Q8NCQ7 364 aaPredicted RBP10.79□□□□□ -0.68
CDKN3-203ENST00000395577 MYSM1Q5VVJ2 828 aa10.78□□□□□ -0.68
CDKN3-203ENST00000395577 EYA1Q99502 592 aa10.78□□□□□ -0.68
CDKN3-203ENST00000395577 TSKSQ9UJT2 592 aa10.78□□□□□ -0.68
CDKN3-203ENST00000395577 HOXB1P14653 301 aaPredicted RBP10.77□□□□□ -0.69
CDKN3-203ENST00000395577 TBC1D2Q9BYX2 928 aa10.77□□□□□ -0.69
CDKN3-203ENST00000395577 NUDT18Q6ZVK8 323 aa10.76□□□□□ -0.69
CDKN3-203ENST00000395577 NBPF26B4DH59 902 aa10.75□□□□□ -0.69
CDKN3-203ENST00000395577 CLK2P49760 499 aaKnown RBP10.75□□□□□ -0.69
CDKN3-203ENST00000395577 DIXDC1Q155Q3 683 aa10.75□□□□□ -0.69
CDKN3-203ENST00000395577 PNMA3Q9UL41 463 aa10.75□□□□□ -0.69
CDKN3-203ENST00000395577 TRIM6-TRIM34B2RNG4 842 aa10.74□□□□□ -0.69
CDKN3-203ENST00000395577 PACS2Q86VP3 889 aa10.74□□□□□ -0.69
CDKN3-203ENST00000395577 TATDN2Q93075 761 aa10.74□□□□□ -0.69
CDKN3-203ENST00000395577 C3orf80F5H4A9 247 aa10.73□□□□□ -0.69
CDKN3-203ENST00000395577 DNAJB2P25686 324 aa10.73□□□□□ -0.69
CDKN3-203ENST00000395577 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.73□□□□□ -0.69
CDKN3-203ENST00000395577 CD46P15529 392 aa10.72□□□□□ -0.69
CDKN3-203ENST00000395577 MCM6Q14566 821 aa10.72□□□□□ -0.69
CDKN3-203ENST00000395577 SULF1Q8IWU6 871 aa10.72□□□□□ -0.69
CDKN3-203ENST00000395577 DDX11L8A8MPP1 907 aa10.71□□□□□ -0.69
CDKN3-203ENST00000395577 UBTFP17480 764 aaKnown RBP10.71□□□□□ -0.69
CDKN3-203ENST00000395577 SPIRE2Q8WWL2 714 aa10.71□□□□□ -0.69
CDKN3-203ENST00000395577 KCNK17Q96T54 332 aa10.71□□□□□ -0.69
CDKN3-203ENST00000395577 A6NJR5 290 aa10.69□□□□□ -0.7
CDKN3-203ENST00000395577 PROX2Q3B8N5 592 aa10.69□□□□□ -0.7
CDKN3-203ENST00000395577 NUTM1Q86Y26 1132 aa10.69□□□□□ -0.7
CDKN3-203ENST00000395577 CLUAP1Q96AJ1 413 aa10.69□□□□□ -0.7
CDKN3-203ENST00000395577 KCNH8Q96L42 1107 aa10.69□□□□□ -0.7
CDKN3-203ENST00000395577 TMEM134Q9H6X4 195 aa10.69□□□□□ -0.7
CDKN3-203ENST00000395577 SMAPO00193 183 aa10.68□□□□□ -0.7
CDKN3-203ENST00000395577 LIMD1Q9UGP4 676 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms