RNA–Protein interactions for RNA: ENST00000395522.6

SPECC1-202, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene SPECC1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-202ENST00000395522 KIAA0556O60303 1618 aa19.34■□□□□ 0.69
SPECC1-202ENST00000395522 JPH4Q96JJ6 628 aa19.34■□□□□ 0.69
SPECC1-202ENST00000395522 KTN1Q86UP2 1357 aaKnown RBP19.33■□□□□ 0.69
SPECC1-202ENST00000395522 RALBP1Q15311 655 aa19.33■□□□□ 0.69
SPECC1-202ENST00000395522 RAPGEF6Q8TEU7 1601 aa19.33■□□□□ 0.68
SPECC1-202ENST00000395522 KIAA0586Q9BVV6 1533 aa19.32■□□□□ 0.68
SPECC1-202ENST00000395522 MYT1LQ9UL68 1186 aa19.32■□□□□ 0.68
SPECC1-202ENST00000395522 C9orf84Q5VXU9 1444 aa19.31■□□□□ 0.68
SPECC1-202ENST00000395522 BRD4O60885 1362 aaPredicted RBP19.31■□□□□ 0.68
SPECC1-202ENST00000395522 ANO8Q9HCE9 1232 aaPredicted RBP19.3■□□□□ 0.68
SPECC1-202ENST00000395522 RGS3P49796 1198 aa19.29■□□□□ 0.68
SPECC1-202ENST00000395522 BACH2Q9BYV9 841 aa19.29■□□□□ 0.68
SPECC1-202ENST00000395522 LRPPRCP42704 1394 aaKnown RBP19.29■□□□□ 0.68
SPECC1-202ENST00000395522 CCDC146Q8IYE0 955 aa19.28■□□□□ 0.68
SPECC1-202ENST00000395522 DISP3Q9P2K9 1392 aa19.27■□□□□ 0.68
SPECC1-202ENST00000395522 TCERG1O14776 1098 aaKnown RBP19.27■□□□□ 0.68
SPECC1-202ENST00000395522 ADAMTS8Q9UP79 889 aa19.27■□□□□ 0.68
SPECC1-202ENST00000395522 POLR1AO95602 1720 aaPredicted RBP19.27■□□□□ 0.68
SPECC1-202ENST00000395522 RALGAPBQ86X10 1494 aa19.26■□□□□ 0.67
SPECC1-202ENST00000395522 GRIN2AQ12879 1464 aa19.25■□□□□ 0.67
SPECC1-202ENST00000395522 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.25■□□□□ 0.67
SPECC1-202ENST00000395522 PER1O15534 1290 aaPredicted RBP19.24■□□□□ 0.67
SPECC1-202ENST00000395522 MRC2Q9UBG0 1479 aa19.23■□□□□ 0.67
SPECC1-202ENST00000395522 ARID4BQ4LE39 1312 aaPredicted RBP19.23■□□□□ 0.67
SPECC1-202ENST00000395522 CCDC144AA2RUR9 1427 aa19.22■□□□□ 0.67
SPECC1-202ENST00000395522 DAXXQ9UER7 740 aaPredicted RBP19.19■□□□□ 0.66
SPECC1-202ENST00000395522 WDR43Q15061 677 aaKnown RBP eCLIP19.18■□□□□ 0.66
SPECC1-202ENST00000395522 SENP3Q9H4L4 574 aaPredicted RBP19.18■□□□□ 0.66
SPECC1-202ENST00000395522 PARD3Q8TEW0 1356 aa19.17■□□□□ 0.66
SPECC1-202ENST00000395522 TESK2Q96S53 571 aa19.17■□□□□ 0.66
SPECC1-202ENST00000395522 BRPF3Q9ULD4 1205 aa19.17■□□□□ 0.66
SPECC1-202ENST00000395522 UHRF1BP1Q6BDS2 1440 aa19.17■□□□□ 0.66
SPECC1-202ENST00000395522 ADGBQ8N7X0 1667 aa19.15■□□□□ 0.66
SPECC1-202ENST00000395522 TMF1P82094 1093 aa19.14■□□□□ 0.66
SPECC1-202ENST00000395522 KNSTRNQ9Y448 316 aa19.14■□□□□ 0.66
SPECC1-202ENST00000395522 ADGRL2O95490 1459 aa19.14■□□□□ 0.65
SPECC1-202ENST00000395522 NEUROD2Q15784 382 aa19.14■□□□□ 0.65
SPECC1-202ENST00000395522 CARMIL2Q6F5E8 1435 aa19.13■□□□□ 0.65
SPECC1-202ENST00000395522 TNNT2P45379 298 aaPredicted RBP19.13■□□□□ 0.65
SPECC1-202ENST00000395522 PDE3BQ13370 1112 aa19.13■□□□□ 0.65
SPECC1-202ENST00000395522 PRAG1Q86YV5 1406 aa19.13■□□□□ 0.65
SPECC1-202ENST00000395522 ATP10BO94823 1461 aa19.13■□□□□ 0.65
SPECC1-202ENST00000395522 MAGI1Q96QZ7 1491 aaPredicted RBP19.13■□□□□ 0.65
SPECC1-202ENST00000395522 IFT140Q96RY7 1462 aa19.13■□□□□ 0.65
SPECC1-202ENST00000395522 ITSN2Q9NZM3 1697 aa19.12■□□□□ 0.65
SPECC1-202ENST00000395522 ERCC6Q03468 1493 aa19.12■□□□□ 0.65
SPECC1-202ENST00000395522 CEP170Q5SW79 1584 aa19.12■□□□□ 0.65
SPECC1-202ENST00000395522 PLEKHH1Q9ULM0 1364 aa19.12■□□□□ 0.65
SPECC1-202ENST00000395522 EIF4G3O43432 1585 aaKnown RBP19.11■□□□□ 0.65
SPECC1-202ENST00000395522 ARXQ96QS3 562 aa19.11■□□□□ 0.65
SPECC1-202ENST00000395522 SPINK5Q9NQ38 1064 aaPredicted RBP19.11■□□□□ 0.65
SPECC1-202ENST00000395522 BCAR3O75815 825 aa19.11■□□□□ 0.65
SPECC1-202ENST00000395522 NFKBIBQ15653 356 aa19.09■□□□□ 0.65
SPECC1-202ENST00000395522 PPP2R1AP30153 589 aa19.08■□□□□ 0.65
SPECC1-202ENST00000395522 FAM135AQ9P2D6 1515 aa19.08■□□□□ 0.64
SPECC1-202ENST00000395522 APAF1O14727 1248 aa19.08■□□□□ 0.64
SPECC1-202ENST00000395522 ERBINQ96RT1 1412 aa19.08■□□□□ 0.64
SPECC1-202ENST00000395522 MS4A1P11836 297 aa19.08■□□□□ 0.64
SPECC1-202ENST00000395522 CDC42BPAQ5VT25 1732 aa19.07■□□□□ 0.64
SPECC1-202ENST00000395522 CROCC2H7BZ55 1655 aa19.07■□□□□ 0.64
SPECC1-202ENST00000395522 A2MP01023 1474 aa19.06■□□□□ 0.64
SPECC1-202ENST00000395522 DUSP27Q5VZP5 1158 aa19.06■□□□□ 0.64
SPECC1-202ENST00000395522 DMRT2Q9Y5R5 561 aa19.06■□□□□ 0.64
SPECC1-202ENST00000395522 PLEKHH2Q8IVE3 1493 aa19.05■□□□□ 0.64
SPECC1-202ENST00000395522 PPM1GO15355 546 aaPredicted RBP19.05■□□□□ 0.64
SPECC1-202ENST00000395522 GOLGA2Q08379 1002 aa19.05■□□□□ 0.64
SPECC1-202ENST00000395522 KDM5DQ9BY66 1539 aa19.04■□□□□ 0.64
SPECC1-202ENST00000395522 ARHGEF12Q9NZN5 1544 aa19.04■□□□□ 0.64
SPECC1-202ENST00000395522 PLA2R1Q13018 1463 aa19.04■□□□□ 0.64
SPECC1-202ENST00000395522 FRAT2O75474 233 aaPredicted RBP19.04■□□□□ 0.64
SPECC1-202ENST00000395522 FRAT1Q92837 279 aaPredicted RBP19.04■□□□□ 0.64
SPECC1-202ENST00000395522 RRP7AQ9Y3A4 280 aaKnown RBP19.04■□□□□ 0.64
SPECC1-202ENST00000395522 CANXP27824 592 aaKnown RBP19.03■□□□□ 0.64
SPECC1-202ENST00000395522 ABCC10Q5T3U5 1492 aa19.03■□□□□ 0.64
SPECC1-202ENST00000395522 BCL2L13Q9BXK5 485 aa19.02■□□□□ 0.64
SPECC1-202ENST00000395522 COL17A1Q9UMD9 1497 aaPredicted RBP19■□□□□ 0.63
SPECC1-202ENST00000395522 C8orf34Q49A92 452 aa19■□□□□ 0.63
SPECC1-202ENST00000395522 DDRGK1Q96HY6 314 aa19■□□□□ 0.63
SPECC1-202ENST00000395522 PTPRGP23470 1445 aa19■□□□□ 0.63
SPECC1-202ENST00000395522 PANK1Q8TE04 598 aa18.99■□□□□ 0.63
SPECC1-202ENST00000395522 SLKQ9H2G2 1235 aaPredicted RBP18.99■□□□□ 0.63
SPECC1-202ENST00000395522 SYCP2Q9BX26 1530 aa18.99■□□□□ 0.63
SPECC1-202ENST00000395522 SYNJ2O15056 1496 aa18.99■□□□□ 0.63
SPECC1-202ENST00000395522 GSE1Q14687 1217 aa18.99■□□□□ 0.63
SPECC1-202ENST00000395522 SPRYD3Q8NCJ5 442 aa18.99■□□□□ 0.63
SPECC1-202ENST00000395522 KDM2BQ8NHM5 1336 aa18.98■□□□□ 0.63
SPECC1-202ENST00000395522 CCDC141Q6ZP82 1450 aa18.98■□□□□ 0.63
SPECC1-202ENST00000395522 CENPQQ7L2Z9 268 aaPredicted RBP18.98■□□□□ 0.63
SPECC1-202ENST00000395522 COG6Q9Y2V7 657 aa18.98■□□□□ 0.63
SPECC1-202ENST00000395522 MAGI2Q86UL8 1455 aa18.98■□□□□ 0.63
SPECC1-202ENST00000395522 FAM161AQ3B820 660 aa18.98■□□□□ 0.63
SPECC1-202ENST00000395522 E9PCH4 1651 aa18.97■□□□□ 0.63
SPECC1-202ENST00000395522 ARHGAP5Q13017 1502 aa18.97■□□□□ 0.63
SPECC1-202ENST00000395522 IGHDP01880 384 aa18.97■□□□□ 0.63
SPECC1-202ENST00000395522 AMER1Q5JTC6 1135 aaPredicted RBP18.97■□□□□ 0.63
SPECC1-202ENST00000395522 BLMP54132 1417 aaPredicted RBP18.97■□□□□ 0.63
SPECC1-202ENST00000395522 TRPM1Q7Z4N2 1603 aa18.96■□□□□ 0.63
SPECC1-202ENST00000395522 EIF5BO60841 1220 aaKnown RBP18.96■□□□□ 0.63
SPECC1-202ENST00000395522 SEC24BO95487 1268 aa18.96■□□□□ 0.63
SPECC1-202ENST00000395522 CHGAP10645 457 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms