RNA–Protein interactions for RNA: ENST00000395388.6

HLA-DRA-202, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DRA, Length 1,280 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-202ENST00000395388 EIF2AK4Q9P2K8 1649 aaKnown RBP18.71■□□□□ 0.58
HLA-DRA-202ENST00000395388 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.7■□□□□ 0.58
HLA-DRA-202ENST00000395388 SETD5Q9C0A6 1442 aa18.7■□□□□ 0.58
HLA-DRA-202ENST00000395388 KANK1Q14678 1352 aa18.68■□□□□ 0.58
HLA-DRA-202ENST00000395388 PCGF6Q9BYE7 350 aa18.68■□□□□ 0.58
HLA-DRA-202ENST00000395388 GCC2Q8IWJ2 1684 aa18.68■□□□□ 0.58
HLA-DRA-202ENST00000395388 TRIM52Q96A61 297 aa18.67■□□□□ 0.58
HLA-DRA-202ENST00000395388 BCORL1Q5H9F3 1711 aa18.66■□□□□ 0.58
HLA-DRA-202ENST00000395388 SIGLEC1Q9BZZ2 1709 aa18.66■□□□□ 0.58
HLA-DRA-202ENST00000395388 WASHC2CQ9Y4E1 1318 aa18.66■□□□□ 0.58
HLA-DRA-202ENST00000395388 HRCP23327 699 aa18.63■□□□□ 0.57
HLA-DRA-202ENST00000395388 NUP155O75694 1391 aa18.62■□□□□ 0.57
HLA-DRA-202ENST00000395388 RNF17Q9BXT8 1623 aaKnown RBP18.61■□□□□ 0.57
HLA-DRA-202ENST00000395388 RAB3GAP2Q9H2M9 1393 aa18.61■□□□□ 0.57
HLA-DRA-202ENST00000395388 CNTLNQ9NXG0 1405 aa18.6■□□□□ 0.57
HLA-DRA-202ENST00000395388 DEPDC5O75140 1603 aa18.58■□□□□ 0.56
HLA-DRA-202ENST00000395388 ADAMTSL3P82987 1691 aa18.57■□□□□ 0.56
HLA-DRA-202ENST00000395388 FAM135AQ9P2D6 1515 aa18.57■□□□□ 0.56
HLA-DRA-202ENST00000395388 UNC13BO14795 1591 aa18.56■□□□□ 0.56
HLA-DRA-202ENST00000395388 FER1L4A9Z1Z3 1794 aa18.56■□□□□ 0.56
HLA-DRA-202ENST00000395388 PRDM15P57071 1507 aaPredicted RBP18.56■□□□□ 0.56
HLA-DRA-202ENST00000395388 KDM5DQ9BY66 1539 aa18.56■□□□□ 0.56
HLA-DRA-202ENST00000395388 KDM4FA0A1W2PPD8 638 aa18.56■□□□□ 0.56
HLA-DRA-202ENST00000395388 MROH1Q8NDA8 1641 aa18.54■□□□□ 0.56
HLA-DRA-202ENST00000395388 MADDQ8WXG6 1647 aa18.54■□□□□ 0.56
HLA-DRA-202ENST00000395388 SLC4A1APQ9BWU0 796 aaKnown RBP18.54■□□□□ 0.56
HLA-DRA-202ENST00000395388 ZMYM3Q14202 1370 aa18.54■□□□□ 0.56
HLA-DRA-202ENST00000395388 CLTCQ00610 1675 aaKnown RBP18.54■□□□□ 0.56
HLA-DRA-202ENST00000395388 ZC3H13Q5T200 1668 aaKnown RBP18.53■□□□□ 0.56
HLA-DRA-202ENST00000395388 ABCC3O15438 1527 aa18.53■□□□□ 0.56
HLA-DRA-202ENST00000395388 RIMS1Q86UR5 1692 aaKnown RBP18.52■□□□□ 0.56
HLA-DRA-202ENST00000395388 MPHOSPH9Q99550 1183 aa18.51■□□□□ 0.55
HLA-DRA-202ENST00000395388 VWDEQ8N2E2 1590 aa18.51■□□□□ 0.55
HLA-DRA-202ENST00000395388 IQGAP3Q86VI3 1631 aa18.5■□□□□ 0.55
HLA-DRA-202ENST00000395388 CEP152O94986 1710 aa18.5■□□□□ 0.55
HLA-DRA-202ENST00000395388 LMTK2Q8IWU2 1503 aa18.49■□□□□ 0.55
HLA-DRA-202ENST00000395388 CEBPAP49715 358 aaPredicted RBP18.49■□□□□ 0.55
HLA-DRA-202ENST00000395388 MROH2AA6NES4 1674 aa18.49■□□□□ 0.55
HLA-DRA-202ENST00000395388 PTPRMP28827 1452 aa18.48■□□□□ 0.55
HLA-DRA-202ENST00000395388 PKD2Q13563 968 aa18.47■□□□□ 0.55
HLA-DRA-202ENST00000395388 TET3O43151 1660 aa18.47■□□□□ 0.55
HLA-DRA-202ENST00000395388 CAMSAP1Q5T5Y3 1602 aa18.46■□□□□ 0.55
HLA-DRA-202ENST00000395388 ARHGAP31Q2M1Z3 1444 aa18.46■□□□□ 0.55
HLA-DRA-202ENST00000395388 PZPP20742 1482 aa18.44■□□□□ 0.54
HLA-DRA-202ENST00000395388 FBXO31Q5XUX0 539 aaPredicted RBP18.43■□□□□ 0.54
HLA-DRA-202ENST00000395388 C3P01024 1663 aa18.43■□□□□ 0.54
HLA-DRA-202ENST00000395388 EFCAB6Q5THR3 1501 aa18.43■□□□□ 0.54
HLA-DRA-202ENST00000395388 NPATQ14207 1427 aa18.42■□□□□ 0.54
HLA-DRA-202ENST00000395388 RPRD2Q5VT52 1461 aaKnown RBP18.42■□□□□ 0.54
HLA-DRA-202ENST00000395388 CFAP65Q6ZU64 1925 aaKnown RBP18.42■□□□□ 0.54
HLA-DRA-202ENST00000395388 E9PCH4 1651 aa18.38■□□□□ 0.53
HLA-DRA-202ENST00000395388 FOXD1Q16676 465 aa18.38■□□□□ 0.53
HLA-DRA-202ENST00000395388 TNRQ92752 1358 aa18.38■□□□□ 0.53
HLA-DRA-202ENST00000395388 ERVK-7P63135 1459 aa18.37■□□□□ 0.53
HLA-DRA-202ENST00000395388 SETD1BQ9UPS6 1966 aaKnown RBP18.37■□□□□ 0.53
HLA-DRA-202ENST00000395388 SLC52A1Q9NWF4 448 aa18.36■□□□□ 0.53
HLA-DRA-202ENST00000395388 PREX1Q8TCU6 1659 aa18.35■□□□□ 0.53
HLA-DRA-202ENST00000395388 STAG3Q9UJ98 1225 aa18.34■□□□□ 0.53
HLA-DRA-202ENST00000395388 SPATA31D1Q6ZQQ2 1576 aa18.34■□□□□ 0.53
HLA-DRA-202ENST00000395388 NOS1P29475 1434 aa18.33■□□□□ 0.53
HLA-DRA-202ENST00000395388 PTPRTO14522 1441 aa18.32■□□□□ 0.52
HLA-DRA-202ENST00000395388 DHX57Q6P158 1386 aaKnown RBP18.31■□□□□ 0.52
HLA-DRA-202ENST00000395388 IDI1Q13907 227 aa18.31■□□□□ 0.52
HLA-DRA-202ENST00000395388 SPHKAPQ2M3C7 1700 aa18.3■□□□□ 0.52
HLA-DRA-202ENST00000395388 CHGAP10645 457 aaKnown RBP18.3■□□□□ 0.52
HLA-DRA-202ENST00000395388 UHRF1BP1Q6BDS2 1440 aa18.3■□□□□ 0.52
HLA-DRA-202ENST00000395388 NLRP1Q9C000 1473 aa18.29■□□□□ 0.52
HLA-DRA-202ENST00000395388 CCDC144AA2RUR9 1427 aa18.28■□□□□ 0.52
HLA-DRA-202ENST00000395388 THEMISQ8N1K5 641 aaPredicted RBP18.27■□□□□ 0.52
HLA-DRA-202ENST00000395388 CCER1Q8TC90 406 aaPredicted RBP18.27■□□□□ 0.52
HLA-DRA-202ENST00000395388 ANKRD30BQ9BXX2 1392 aa18.27■□□□□ 0.51
HLA-DRA-202ENST00000395388 SYNMO15061 1565 aa18.26■□□□□ 0.51
HLA-DRA-202ENST00000395388 TRPM2O94759 1503 aa18.26■□□□□ 0.51
HLA-DRA-202ENST00000395388 A2ML1A8K2U0 1454 aa18.25■□□□□ 0.51
HLA-DRA-202ENST00000395388 PLA2R1Q13018 1463 aa18.25■□□□□ 0.51
HLA-DRA-202ENST00000395388 MYO3AQ8NEV4 1616 aa18.23■□□□□ 0.51
HLA-DRA-202ENST00000395388 HDGFP51858 240 aaKnown RBP18.22■□□□□ 0.51
HLA-DRA-202ENST00000395388 ZNF326Q5BKZ1 582 aaKnown RBP18.22■□□□□ 0.51
HLA-DRA-202ENST00000395388 UGGT1Q9NYU2 1555 aa18.21■□□□□ 0.51
HLA-DRA-202ENST00000395388 CEP170BQ9Y4F5 1589 aaPredicted RBP18.21■□□□□ 0.51
HLA-DRA-202ENST00000395388 PIK3C2BO00750 1634 aa18.2■□□□□ 0.5
HLA-DRA-202ENST00000395388 NEUROD1Q13562 356 aa18.2■□□□□ 0.5
HLA-DRA-202ENST00000395388 KIF1BO60333 1816 aa18.2■□□□□ 0.5
HLA-DRA-202ENST00000395388 CLSPNQ9HAW4 1339 aa18.2■□□□□ 0.5
HLA-DRA-202ENST00000395388 CLTCL1P53675 1640 aa18.2■□□□□ 0.5
HLA-DRA-202ENST00000395388 RGL3Q3MIN7 710 aa18.18■□□□□ 0.5
HLA-DRA-202ENST00000395388 SIN3AQ96ST3 1273 aa18.18■□□□□ 0.5
HLA-DRA-202ENST00000395388 EID1Q9Y6B2 187 aa18.18■□□□□ 0.5
HLA-DRA-202ENST00000395388 ZNF142P52746 1687 aaPredicted RBP18.18■□□□□ 0.5
HLA-DRA-202ENST00000395388 KDM5AP29375 1690 aaKnown RBP18.16■□□□□ 0.5
HLA-DRA-202ENST00000395388 ADGRB3O60242 1522 aa18.16■□□□□ 0.5
HLA-DRA-202ENST00000395388 UBR1Q8IWV7 1749 aa18.15■□□□□ 0.5
HLA-DRA-202ENST00000395388 LMTK3Q96Q04 1460 aa18.15■□□□□ 0.5
HLA-DRA-202ENST00000395388 HSPA2P54652 639 aa18.15■□□□□ 0.5
HLA-DRA-202ENST00000395388 ANKLE2Q86XL3 938 aa18.15■□□□□ 0.5
HLA-DRA-202ENST00000395388 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.15■□□□□ 0.5
HLA-DRA-202ENST00000395388 RPGRIP1LQ68CZ1 1315 aa18.15■□□□□ 0.5
HLA-DRA-202ENST00000395388 TMEM131LA2VDJ0 1609 aa18.15■□□□□ 0.5
HLA-DRA-202ENST00000395388 PPP1R15AO75807 674 aaPredicted RBP18.13■□□□□ 0.49
HLA-DRA-202ENST00000395388 TXNDC2Q86VQ3 553 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms