RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 DUOX2Q9NRD8 1548 aa20.67■□□□□ 0.9
HLA-DMA-202ENST00000395303 ADGRL2O95490 1459 aa20.63■□□□□ 0.89
HLA-DMA-202ENST00000395303 KIF3BO15066 747 aa20.62■□□□□ 0.89
HLA-DMA-202ENST00000395303 ESF1Q9H501 851 aaKnown RBP20.62■□□□□ 0.89
HLA-DMA-202ENST00000395303 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.61■□□□□ 0.89
HLA-DMA-202ENST00000395303 GGT6Q6P531 493 aa20.61■□□□□ 0.89
HLA-DMA-202ENST00000395303 MROH1Q8NDA8 1641 aa20.6■□□□□ 0.89
HLA-DMA-202ENST00000395303 DMRT2Q9Y5R5 561 aa20.6■□□□□ 0.89
HLA-DMA-202ENST00000395303 PTPRTO14522 1441 aa20.6■□□□□ 0.89
HLA-DMA-202ENST00000395303 ZMYM3Q14202 1370 aa20.59■□□□□ 0.89
HLA-DMA-202ENST00000395303 KIF15Q9NS87 1388 aa20.59■□□□□ 0.89
HLA-DMA-202ENST00000395303 KDM5DQ9BY66 1539 aa20.59■□□□□ 0.89
HLA-DMA-202ENST00000395303 ZC3H13Q5T200 1668 aaKnown RBP20.59■□□□□ 0.89
HLA-DMA-202ENST00000395303 NCOA1Q15788 1441 aa20.59■□□□□ 0.89
HLA-DMA-202ENST00000395303 ERBINQ96RT1 1412 aa20.59■□□□□ 0.89
HLA-DMA-202ENST00000395303 FAM50AQ14320 339 aaKnown RBP20.58■□□□□ 0.89
HLA-DMA-202ENST00000395303 NPATQ14207 1427 aa20.58■□□□□ 0.88
HLA-DMA-202ENST00000395303 ANKRD30AQ9BXX3 1397 aa20.58■□□□□ 0.88
HLA-DMA-202ENST00000395303 DEPDC5O75140 1603 aa20.57■□□□□ 0.88
HLA-DMA-202ENST00000395303 PPARGC1BQ86YN6 1023 aaKnown RBP20.57■□□□□ 0.88
HLA-DMA-202ENST00000395303 RRBP1Q9P2E9 1410 aaKnown RBP20.55■□□□□ 0.88
HLA-DMA-202ENST00000395303 CEP152O94986 1710 aa20.55■□□□□ 0.88
HLA-DMA-202ENST00000395303 PTPRKQ15262 1439 aa20.54■□□□□ 0.88
HLA-DMA-202ENST00000395303 PRDM15P57071 1507 aaPredicted RBP20.54■□□□□ 0.88
HLA-DMA-202ENST00000395303 LTBP4Q8N2S1 1624 aa20.54■□□□□ 0.88
HLA-DMA-202ENST00000395303 RRP7BPQ9NSQ0 103 aa20.54■□□□□ 0.88
HLA-DMA-202ENST00000395303 ABCC3O15438 1527 aa20.53■□□□□ 0.88
HLA-DMA-202ENST00000395303 CHIC2Q9UKJ5 165 aa20.52■□□□□ 0.88
HLA-DMA-202ENST00000395303 ZNF142P52746 1687 aaPredicted RBP20.51■□□□□ 0.87
HLA-DMA-202ENST00000395303 PZPP20742 1482 aa20.5■□□□□ 0.87
HLA-DMA-202ENST00000395303 ROCK1Q13464 1354 aa20.5■□□□□ 0.87
HLA-DMA-202ENST00000395303 CAMSAP1Q5T5Y3 1602 aa20.5■□□□□ 0.87
HLA-DMA-202ENST00000395303 CFAP65Q6ZU64 1925 aaKnown RBP20.5■□□□□ 0.87
HLA-DMA-202ENST00000395303 MYO3AQ8NEV4 1616 aa20.49■□□□□ 0.87
HLA-DMA-202ENST00000395303 VWDEQ8N2E2 1590 aa20.48■□□□□ 0.87
HLA-DMA-202ENST00000395303 WASHC2CQ9Y4E1 1318 aa20.48■□□□□ 0.87
HLA-DMA-202ENST00000395303 ANKRD50Q9ULJ7 1429 aa20.44■□□□□ 0.86
HLA-DMA-202ENST00000395303 CEP170BQ9Y4F5 1589 aaPredicted RBP20.44■□□□□ 0.86
HLA-DMA-202ENST00000395303 IQSEC2Q5JU85 1478 aa20.43■□□□□ 0.86
HLA-DMA-202ENST00000395303 LMTK2Q8IWU2 1503 aa20.43■□□□□ 0.86
HLA-DMA-202ENST00000395303 PLA2R1Q13018 1463 aa20.43■□□□□ 0.86
HLA-DMA-202ENST00000395303 SPATA31D1Q6ZQQ2 1576 aa20.42■□□□□ 0.86
HLA-DMA-202ENST00000395303 ARHGAP31Q2M1Z3 1444 aa20.42■□□□□ 0.86
HLA-DMA-202ENST00000395303 UNC13BO14795 1591 aa20.42■□□□□ 0.86
HLA-DMA-202ENST00000395303 NCKAP5LQ9HCH0 1330 aa20.39■□□□□ 0.85
HLA-DMA-202ENST00000395303 A2ML1A8K2U0 1454 aa20.38■□□□□ 0.85
HLA-DMA-202ENST00000395303 KANK1Q14678 1352 aa20.38■□□□□ 0.85
HLA-DMA-202ENST00000395303 TNRQ92752 1358 aa20.38■□□□□ 0.85
HLA-DMA-202ENST00000395303 FBXO31Q5XUX0 539 aaPredicted RBP20.38■□□□□ 0.85
HLA-DMA-202ENST00000395303 ERVK-7P63135 1459 aa20.37■□□□□ 0.85
HLA-DMA-202ENST00000395303 GCC2Q8IWJ2 1684 aa20.36■□□□□ 0.85
HLA-DMA-202ENST00000395303 TET3O43151 1660 aa20.35■□□□□ 0.85
HLA-DMA-202ENST00000395303 NLRP1Q9C000 1473 aa20.35■□□□□ 0.85
HLA-DMA-202ENST00000395303 ZNF335Q9H4Z2 1342 aaPredicted RBP20.34■□□□□ 0.85
HLA-DMA-202ENST00000395303 EFCAB6Q5THR3 1501 aa20.34■□□□□ 0.85
HLA-DMA-202ENST00000395303 ITGAEP38570 1179 aa20.33■□□□□ 0.85
HLA-DMA-202ENST00000395303 PKD2Q13563 968 aa20.33■□□□□ 0.85
HLA-DMA-202ENST00000395303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.33■□□□□ 0.85
HLA-DMA-202ENST00000395303 IQGAP3Q86VI3 1631 aa20.33■□□□□ 0.84
HLA-DMA-202ENST00000395303 DISP3Q9P2K9 1392 aa20.32■□□□□ 0.84
HLA-DMA-202ENST00000395303 ILDR2Q71H61 639 aa20.29■□□□□ 0.84
HLA-DMA-202ENST00000395303 POLR1AO95602 1720 aaPredicted RBP20.29■□□□□ 0.84
HLA-DMA-202ENST00000395303 RPRD2Q5VT52 1461 aaKnown RBP20.29■□□□□ 0.84
HLA-DMA-202ENST00000395303 NAIPQ13075 1403 aa20.28■□□□□ 0.84
HLA-DMA-202ENST00000395303 UBR1Q8IWV7 1749 aa20.28■□□□□ 0.84
HLA-DMA-202ENST00000395303 NEURL4Q96JN8 1562 aa20.28■□□□□ 0.84
HLA-DMA-202ENST00000395303 UGGT1Q9NYU2 1555 aa20.28■□□□□ 0.84
HLA-DMA-202ENST00000395303 E9PCH4 1651 aa20.27■□□□□ 0.84
HLA-DMA-202ENST00000395303 KDM5AP29375 1690 aaKnown RBP20.27■□□□□ 0.84
HLA-DMA-202ENST00000395303 NOS1P29475 1434 aa20.27■□□□□ 0.83
HLA-DMA-202ENST00000395303 HFM1A2PYH4 1435 aa20.26■□□□□ 0.83
HLA-DMA-202ENST00000395303 SYNMO15061 1565 aa20.25■□□□□ 0.83
HLA-DMA-202ENST00000395303 PIK3C2BO00750 1634 aa20.24■□□□□ 0.83
HLA-DMA-202ENST00000395303 THEMISQ8N1K5 641 aaPredicted RBP20.2■□□□□ 0.82
HLA-DMA-202ENST00000395303 NUP155O75694 1391 aa20.2■□□□□ 0.82
HLA-DMA-202ENST00000395303 UBAP1LF5GYI3 381 aa20.19■□□□□ 0.82
HLA-DMA-202ENST00000395303 MYO5BQ9ULV0 1848 aa20.18■□□□□ 0.82
HLA-DMA-202ENST00000395303 ARHGAP23Q9P227 1491 aa20.17■□□□□ 0.82
HLA-DMA-202ENST00000395303 SLIT1O75093 1534 aa20.17■□□□□ 0.82
HLA-DMA-202ENST00000395303 MED14O60244 1454 aa20.16■□□□□ 0.82
HLA-DMA-202ENST00000395303 CPS1P31327 1500 aa20.16■□□□□ 0.82
HLA-DMA-202ENST00000395303 SPHKAPQ2M3C7 1700 aa20.16■□□□□ 0.82
HLA-DMA-202ENST00000395303 SOCS7O14512 581 aa20.15■□□□□ 0.82
HLA-DMA-202ENST00000395303 SLC52A1Q9NWF4 448 aa20.14■□□□□ 0.81
HLA-DMA-202ENST00000395303 ADGRB3O60242 1522 aa20.13■□□□□ 0.81
HLA-DMA-202ENST00000395303 IDI1Q13907 227 aa20.13■□□□□ 0.81
HLA-DMA-202ENST00000395303 ANKLE2Q86XL3 938 aa20.12■□□□□ 0.81
HLA-DMA-202ENST00000395303 IQGAP1P46940 1657 aa20.12■□□□□ 0.81
HLA-DMA-202ENST00000395303 TMEM131LA2VDJ0 1609 aa20.11■□□□□ 0.81
HLA-DMA-202ENST00000395303 NPHP4O75161 1426 aaPredicted RBP20.1■□□□□ 0.81
HLA-DMA-202ENST00000395303 SCAF11Q99590 1463 aaKnown RBP20.08■□□□□ 0.81
HLA-DMA-202ENST00000395303 ALKQ9UM73 1620 aa20.08■□□□□ 0.8
HLA-DMA-202ENST00000395303 TMEM2Q9UHN6 1383 aa20.07■□□□□ 0.8
HLA-DMA-202ENST00000395303 STRCP1A6NGW2 1772 aa20.06■□□□□ 0.8
HLA-DMA-202ENST00000395303 SETD5Q9C0A6 1442 aa20.03■□□□□ 0.8
HLA-DMA-202ENST00000395303 TRPM2O94759 1503 aa20.03■□□□□ 0.8
HLA-DMA-202ENST00000395303 LTKP29376 864 aa20.03■□□□□ 0.8
HLA-DMA-202ENST00000395303 HSPA1LP34931 641 aa20.03■□□□□ 0.8
HLA-DMA-202ENST00000395303 STAG3Q9UJ98 1225 aa20.03■□□□□ 0.8
HLA-DMA-202ENST00000395303 KIF1BO60333 1816 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms