RNA–Protein interactions for RNA: ENST00000395131.5

PFDN6-204, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-204ENST00000395131 SYNMO15061 1565 aa23.06■■□□□ 1.28
PFDN6-204ENST00000395131 POTEAQ6S8J7 498 aa23.05■■□□□ 1.28
PFDN6-204ENST00000395131 TNRQ92752 1358 aa23.04■■□□□ 1.28
PFDN6-204ENST00000395131 HNRNPMP52272 730 aaKnown RBP eCLIP23.04■■□□□ 1.28
PFDN6-204ENST00000395131 THEMISQ8N1K5 641 aaPredicted RBP23.04■■□□□ 1.28
PFDN6-204ENST00000395131 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.03■■□□□ 1.28
PFDN6-204ENST00000395131 IQGAP1P46940 1657 aa23.03■■□□□ 1.28
PFDN6-204ENST00000395131 SENP3Q9H4L4 574 aaPredicted RBP23.02■■□□□ 1.28
PFDN6-204ENST00000395131 CCDC18Q5T9S5 1454 aa23.02■■□□□ 1.28
PFDN6-204ENST00000395131 ZNF777Q9ULD5 760 aaPredicted RBP23.01■■□□□ 1.27
PFDN6-204ENST00000395131 GPATCH8Q9UKJ3 1502 aaKnown RBP23■■□□□ 1.27
PFDN6-204ENST00000395131 FBXO31Q5XUX0 539 aaPredicted RBP23■■□□□ 1.27
PFDN6-204ENST00000395131 PZPP20742 1482 aa22.99■■□□□ 1.27
PFDN6-204ENST00000395131 PLEKHH2Q8IVE3 1493 aa22.99■■□□□ 1.27
PFDN6-204ENST00000395131 NLRP1Q9C000 1473 aa22.98■■□□□ 1.27
PFDN6-204ENST00000395131 FAM135AQ9P2D6 1515 aa22.98■■□□□ 1.27
PFDN6-204ENST00000395131 UGGT1Q9NYU2 1555 aa22.97■■□□□ 1.27
PFDN6-204ENST00000395131 MIA2Q96PC5 1412 aa22.94■■□□□ 1.26
PFDN6-204ENST00000395131 CASKIN1Q8WXD9 1431 aa22.93■■□□□ 1.26
PFDN6-204ENST00000395131 XIRP1Q702N8 1843 aaKnown RBP22.92■■□□□ 1.26
PFDN6-204ENST00000395131 SETD1AO15047 1707 aaKnown RBP22.92■■□□□ 1.26
PFDN6-204ENST00000395131 FAM135BQ49AJ0 1406 aa22.91■■□□□ 1.26
PFDN6-204ENST00000395131 KDM5DQ9BY66 1539 aa22.91■■□□□ 1.26
PFDN6-204ENST00000395131 ZC3H13Q5T200 1668 aaKnown RBP22.9■■□□□ 1.26
PFDN6-204ENST00000395131 UBTFP17480 764 aaKnown RBP22.9■■□□□ 1.26
PFDN6-204ENST00000395131 DHX29Q7Z478 1369 aaKnown RBP22.89■■□□□ 1.26
PFDN6-204ENST00000395131 RTEL1-TNFRSF6BF6WH68 1400 aa22.89■■□□□ 1.25
PFDN6-204ENST00000395131 CFDP1Q9UEE9 299 aaPredicted RBP22.87■■□□□ 1.25
PFDN6-204ENST00000395131 WASHC2CQ9Y4E1 1318 aa22.82■■□□□ 1.24
PFDN6-204ENST00000395131 MBD5Q9P267 1494 aa22.81■■□□□ 1.24
PFDN6-204ENST00000395131 KIF3BO15066 747 aa22.81■■□□□ 1.24
PFDN6-204ENST00000395131 UPF1Q92900 1129 aaKnown RBP eCLIP22.81■■□□□ 1.24
PFDN6-204ENST00000395131 CCNB3Q8WWL7 1395 aa22.77■■□□□ 1.24
PFDN6-204ENST00000395131 FYCO1Q9BQS8 1478 aa22.77■■□□□ 1.24
PFDN6-204ENST00000395131 ROBO1Q9Y6N7 1651 aa22.76■■□□□ 1.23
PFDN6-204ENST00000395131 UBR1Q8IWV7 1749 aa22.74■■□□□ 1.23
PFDN6-204ENST00000395131 SCAF11Q99590 1463 aaKnown RBP22.73■■□□□ 1.23
PFDN6-204ENST00000395131 ZNF644Q9H582 1327 aaPredicted RBP22.72■■□□□ 1.23
PFDN6-204ENST00000395131 EHMT2Q96KQ7 1210 aa22.7■■□□□ 1.22
PFDN6-204ENST00000395131 SLIT1O75093 1534 aa22.69■■□□□ 1.22
PFDN6-204ENST00000395131 ARHGAP23Q9P227 1491 aa22.69■■□□□ 1.22
PFDN6-204ENST00000395131 LTKP29376 864 aa22.67■■□□□ 1.22
PFDN6-204ENST00000395131 LRRC9Q6ZRR7 1453 aa22.66■■□□□ 1.22
PFDN6-204ENST00000395131 ERVK-7P63135 1459 aa22.66■■□□□ 1.22
PFDN6-204ENST00000395131 NCOA2Q15596 1464 aa22.66■■□□□ 1.22
PFDN6-204ENST00000395131 JCADQ9P266 1359 aa22.65■■□□□ 1.22
PFDN6-204ENST00000395131 TIAM1Q13009 1591 aa22.65■■□□□ 1.22
PFDN6-204ENST00000395131 TMEM94Q12767 1356 aa22.64■■□□□ 1.22
PFDN6-204ENST00000395131 TXNDC2Q86VQ3 553 aa22.64■■□□□ 1.21
PFDN6-204ENST00000395131 ABCC3O15438 1527 aa22.63■■□□□ 1.21
PFDN6-204ENST00000395131 MAP3K1Q13233 1512 aa22.63■■□□□ 1.21
PFDN6-204ENST00000395131 PHLPP1O60346 1717 aa22.63■■□□□ 1.21
PFDN6-204ENST00000395131 RSPH4AQ5TD94 716 aa22.62■■□□□ 1.21
PFDN6-204ENST00000395131 CCDC141Q6ZP82 1450 aa22.61■■□□□ 1.21
PFDN6-204ENST00000395131 ZNF772Q68DY9 489 aaPredicted RBP22.61■■□□□ 1.21
PFDN6-204ENST00000395131 CFAP65Q6ZU64 1925 aaKnown RBP22.59■■□□□ 1.21
PFDN6-204ENST00000395131 KCNA6P17658 529 aa22.58■■□□□ 1.21
PFDN6-204ENST00000395131 MTUS2Q5JR59 1369 aa22.57■■□□□ 1.2
PFDN6-204ENST00000395131 TRIM52Q96A61 297 aa22.56■■□□□ 1.2
PFDN6-204ENST00000395131 EID1Q9Y6B2 187 aa22.56■■□□□ 1.2
PFDN6-204ENST00000395131 SPATA31A6Q5VVP1 1343 aa22.56■■□□□ 1.2
PFDN6-204ENST00000395131 CDK12Q9NYV4 1490 aaPredicted RBP22.55■■□□□ 1.2
PFDN6-204ENST00000395131 LRP6O75581 1613 aa22.55■■□□□ 1.2
PFDN6-204ENST00000395131 COL16A1Q07092 1604 aaPredicted RBP22.55■■□□□ 1.2
PFDN6-204ENST00000395131 CAMSAP2Q08AD1 1489 aa22.54■■□□□ 1.2
PFDN6-204ENST00000395131 PRDM15P57071 1507 aaPredicted RBP22.54■■□□□ 1.2
PFDN6-204ENST00000395131 SRCAPQ6ZRS2 3230 aa22.53■■□□□ 1.2
PFDN6-204ENST00000395131 PROSER2Q86WR7 435 aaPredicted RBP22.53■■□□□ 1.2
PFDN6-204ENST00000395131 SLAIN2Q9P270 581 aa22.53■■□□□ 1.2
PFDN6-204ENST00000395131 FGD6Q6ZV73 1430 aa22.53■■□□□ 1.2
PFDN6-204ENST00000395131 EIF2AK4Q9P2K8 1649 aaKnown RBP22.51■■□□□ 1.19
PFDN6-204ENST00000395131 RXRBP28702 533 aa22.51■■□□□ 1.19
PFDN6-204ENST00000395131 TET3O43151 1660 aa22.51■■□□□ 1.19
PFDN6-204ENST00000395131 TMEM2Q9UHN6 1383 aa22.5■■□□□ 1.19
PFDN6-204ENST00000395131 MROH1Q8NDA8 1641 aa22.5■■□□□ 1.19
PFDN6-204ENST00000395131 NKTRP30414 1462 aaKnown RBP22.5■■□□□ 1.19
PFDN6-204ENST00000395131 CEP162Q5TB80 1403 aa22.49■■□□□ 1.19
PFDN6-204ENST00000395131 CEP152O94986 1710 aa22.49■■□□□ 1.19
PFDN6-204ENST00000395131 ARHGEF5Q12774 1597 aa22.49■■□□□ 1.19
PFDN6-204ENST00000395131 NWD1Q149M9 1564 aa22.49■■□□□ 1.19
PFDN6-204ENST00000395131 MSH6P52701 1360 aa22.49■■□□□ 1.19
PFDN6-204ENST00000395131 KDM5AP29375 1690 aaKnown RBP22.49■■□□□ 1.19
PFDN6-204ENST00000395131 EHBP1L1Q8N3D4 1523 aa22.48■■□□□ 1.19
PFDN6-204ENST00000395131 SHPRHQ149N8 1683 aa22.47■■□□□ 1.19
PFDN6-204ENST00000395131 ARHGAP31Q2M1Z3 1444 aa22.47■■□□□ 1.19
PFDN6-204ENST00000395131 RBM33Q96EV2 1170 aaKnown RBP22.46■■□□□ 1.19
PFDN6-204ENST00000395131 PIK3C2BO00750 1634 aa22.46■■□□□ 1.19
PFDN6-204ENST00000395131 TSPY4P0CV99 314 aa22.45■■□□□ 1.18
PFDN6-204ENST00000395131 TSPY10P0CW01 314 aa22.45■■□□□ 1.18
PFDN6-204ENST00000395131 MEX3CQ5U5Q3 659 aaKnown RBP22.45■■□□□ 1.18
PFDN6-204ENST00000395131 MAST1Q9Y2H9 1570 aa22.42■■□□□ 1.18
PFDN6-204ENST00000395131 AHDC1Q5TGY3 1603 aaPredicted RBP22.4■■□□□ 1.18
PFDN6-204ENST00000395131 SLC26A8Q96RN1 970 aa22.4■■□□□ 1.18
PFDN6-204ENST00000395131 EFCAB6Q5THR3 1501 aa22.38■■□□□ 1.17
PFDN6-204ENST00000395131 CHD2O14647 1828 aaKnown RBP22.37■■□□□ 1.17
PFDN6-204ENST00000395131 NCOA3Q9Y6Q9 1424 aa22.36■■□□□ 1.17
PFDN6-204ENST00000395131 STAG3Q9UJ98 1225 aa22.33■■□□□ 1.17
PFDN6-204ENST00000395131 DIP2AQ14689 1571 aa22.33■■□□□ 1.16
PFDN6-204ENST00000395131 RGS12O14924 1447 aa22.32■■□□□ 1.16
PFDN6-204ENST00000395131 IDI1Q13907 227 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms