RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 KIF15Q9NS87 1388 aa18.93■□□□□ 0.62
CLIP2-203ENST00000395060 DAXXQ9UER7 740 aaPredicted RBP18.93■□□□□ 0.62
CLIP2-203ENST00000395060 GPATCH8Q9UKJ3 1502 aaKnown RBP18.92■□□□□ 0.62
CLIP2-203ENST00000395060 NUP155O75694 1391 aa18.92■□□□□ 0.62
CLIP2-203ENST00000395060 EIF5BO60841 1220 aaKnown RBP18.91■□□□□ 0.62
CLIP2-203ENST00000395060 RGS3P49796 1198 aa18.91■□□□□ 0.62
CLIP2-203ENST00000395060 CAMSAP2Q08AD1 1489 aa18.91■□□□□ 0.62
CLIP2-203ENST00000395060 KIF14Q15058 1648 aa18.91■□□□□ 0.62
CLIP2-203ENST00000395060 PZPP20742 1482 aa18.9■□□□□ 0.62
CLIP2-203ENST00000395060 NUP160Q12769 1436 aa18.9■□□□□ 0.62
CLIP2-203ENST00000395060 TSPY4P0CV99 314 aa18.89■□□□□ 0.62
CLIP2-203ENST00000395060 TSPY10P0CW01 314 aa18.89■□□□□ 0.62
CLIP2-203ENST00000395060 NBPF1Q3BBV0 1214 aa18.89■□□□□ 0.61
CLIP2-203ENST00000395060 ROCK1Q13464 1354 aa18.89■□□□□ 0.61
CLIP2-203ENST00000395060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.88■□□□□ 0.612e-6■■■□□ 16.4
CLIP2-203ENST00000395060 PTPRGP23470 1445 aa18.87■□□□□ 0.61
CLIP2-203ENST00000395060 ROCK2O75116 1388 aaKnown RBP18.87■□□□□ 0.61
CLIP2-203ENST00000395060 RALBP1Q15311 655 aa18.87■□□□□ 0.61
CLIP2-203ENST00000395060 NLRP13Q86W25 1043 aa18.87■□□□□ 0.61
CLIP2-203ENST00000395060 ATP10BO94823 1461 aa18.86■□□□□ 0.61
CLIP2-203ENST00000395060 KIAA1107Q9UPP5 1409 aa18.86■□□□□ 0.61
CLIP2-203ENST00000395060 NFKBIBQ15653 356 aa18.86■□□□□ 0.61
CLIP2-203ENST00000395060 PPM1GO15355 546 aaPredicted RBP18.85■□□□□ 0.61
CLIP2-203ENST00000395060 DNMT1P26358 1616 aaKnown RBP18.85■□□□□ 0.61
CLIP2-203ENST00000395060 BRD4O60885 1362 aaPredicted RBP18.84■□□□□ 0.61
CLIP2-203ENST00000395060 FRAT1Q92837 279 aaPredicted RBP18.83■□□□□ 0.61
CLIP2-203ENST00000395060 ARXQ96QS3 562 aa18.83■□□□□ 0.61
CLIP2-203ENST00000395060 LRPPRCP42704 1394 aaKnown RBP18.83■□□□□ 0.61
CLIP2-203ENST00000395060 KTN1Q86UP2 1357 aaKnown RBP18.83■□□□□ 0.61
CLIP2-203ENST00000395060 ANKRD30AQ9BXX3 1397 aa18.83■□□□□ 0.61
CLIP2-203ENST00000395060 GSE1Q14687 1217 aa18.81■□□□□ 0.6
CLIP2-203ENST00000395060 PANK3Q9H999 370 aa18.81■□□□□ 0.6
CLIP2-203ENST00000395060 ANKRD50Q9ULJ7 1429 aa18.8■□□□□ 0.6
CLIP2-203ENST00000395060 MS4A1P11836 297 aa18.79■□□□□ 0.6
CLIP2-203ENST00000395060 FRAT2O75474 233 aaPredicted RBP18.78■□□□□ 0.6
CLIP2-203ENST00000395060 USP35Q9P2H5 1018 aa18.78■□□□□ 0.6
CLIP2-203ENST00000395060 ADAMTS8Q9UP79 889 aa18.78■□□□□ 0.6
CLIP2-203ENST00000395060 KDM5CP41229 1560 aa18.77■□□□□ 0.6
CLIP2-203ENST00000395060 DDRGK1Q96HY6 314 aa18.76■□□□□ 0.59
CLIP2-203ENST00000395060 CCDC146Q8IYE0 955 aa18.76■□□□□ 0.59
CLIP2-203ENST00000395060 MBD5Q9P267 1494 aa18.76■□□□□ 0.59
CLIP2-203ENST00000395060 ARID4BQ4LE39 1312 aaPredicted RBP18.75■□□□□ 0.59
CLIP2-203ENST00000395060 C9orf84Q5VXU9 1444 aa18.75■□□□□ 0.59
CLIP2-203ENST00000395060 PDE3BQ13370 1112 aa18.74■□□□□ 0.59
CLIP2-203ENST00000395060 PER1O15534 1290 aaPredicted RBP18.72■□□□□ 0.59
CLIP2-203ENST00000395060 ABCA8O94911 1581 aa18.72■□□□□ 0.59
CLIP2-203ENST00000395060 POLR1AO95602 1720 aaPredicted RBP18.71■□□□□ 0.59
CLIP2-203ENST00000395060 WASHC2CQ9Y4E1 1318 aa18.71■□□□□ 0.59
CLIP2-203ENST00000395060 ABCC10Q5T3U5 1492 aa18.7■□□□□ 0.58
CLIP2-203ENST00000395060 WDR43Q15061 677 aaKnown RBP eCLIP18.69■□□□□ 0.58
CLIP2-203ENST00000395060 DISP3Q9P2K9 1392 aa18.69■□□□□ 0.58
CLIP2-203ENST00000395060 RALGAPBQ86X10 1494 aa18.69■□□□□ 0.58
CLIP2-203ENST00000395060 ITSN2Q9NZM3 1697 aa18.69■□□□□ 0.58
CLIP2-203ENST00000395060 SLKQ9H2G2 1235 aaPredicted RBP18.68■□□□□ 0.58
CLIP2-203ENST00000395060 PARD3Q8TEW0 1356 aa18.67■□□□□ 0.58
CLIP2-203ENST00000395060 C8orf34Q49A92 452 aa18.66■□□□□ 0.58
CLIP2-203ENST00000395060 FAM161AQ3B820 660 aa18.66■□□□□ 0.58
CLIP2-203ENST00000395060 BCAR3O75815 825 aa18.65■□□□□ 0.58
CLIP2-203ENST00000395060 ERCC6L2Q5T890 1561 aa18.65■□□□□ 0.58
CLIP2-203ENST00000395060 CDC42BPAQ5VT25 1732 aa18.65■□□□□ 0.58
CLIP2-203ENST00000395060 SPRYD3Q8NCJ5 442 aa18.64■□□□□ 0.57
CLIP2-203ENST00000395060 ADGRL2O95490 1459 aa18.64■□□□□ 0.57
CLIP2-203ENST00000395060 CENPQQ7L2Z9 268 aaPredicted RBP18.63■□□□□ 0.57
CLIP2-203ENST00000395060 PLEKHH1Q9ULM0 1364 aa18.63■□□□□ 0.57
CLIP2-203ENST00000395060 SPINK5Q9NQ38 1064 aaPredicted RBP18.62■□□□□ 0.57
CLIP2-203ENST00000395060 NEUROD2Q15784 382 aa18.61■□□□□ 0.57
CLIP2-203ENST00000395060 DUSP27Q5VZP5 1158 aa18.61■□□□□ 0.57
CLIP2-203ENST00000395060 KNSTRNQ9Y448 316 aa18.61■□□□□ 0.57
CLIP2-203ENST00000395060 ADCY10Q96PN6 1610 aa18.61■□□□□ 0.57
CLIP2-203ENST00000395060 KDM2BQ8NHM5 1336 aa18.61■□□□□ 0.57
CLIP2-203ENST00000395060 UHRF1BP1Q6BDS2 1440 aa18.6■□□□□ 0.57
CLIP2-203ENST00000395060 TMF1P82094 1093 aa18.6■□□□□ 0.57
CLIP2-203ENST00000395060 GOLGA2Q08379 1002 aa18.6■□□□□ 0.57
CLIP2-203ENST00000395060 TESK2Q96S53 571 aa18.6■□□□□ 0.57
CLIP2-203ENST00000395060 CHD1O14646 1710 aa18.59■□□□□ 0.57
CLIP2-203ENST00000395060 APAF1O14727 1248 aa18.59■□□□□ 0.57
CLIP2-203ENST00000395060 SEC24BO95487 1268 aa18.59■□□□□ 0.57
CLIP2-203ENST00000395060 CANXP27824 592 aaKnown RBP18.59■□□□□ 0.57
CLIP2-203ENST00000395060 POGKQ9P215 609 aa18.59■□□□□ 0.57
CLIP2-203ENST00000395060 ARHGAP5Q13017 1502 aa18.59■□□□□ 0.57
CLIP2-203ENST00000395060 CCDC144AA2RUR9 1427 aa18.58■□□□□ 0.57
CLIP2-203ENST00000395060 ADGBQ8N7X0 1667 aa18.58■□□□□ 0.56
CLIP2-203ENST00000395060 PPP2R1AP30153 589 aa18.57■□□□□ 0.56
CLIP2-203ENST00000395060 IGHDP01880 384 aa18.56■□□□□ 0.56
CLIP2-203ENST00000395060 TNNT2P45379 298 aaPredicted RBP18.55■□□□□ 0.56
CLIP2-203ENST00000395060 CCDC141Q6ZP82 1450 aa18.55■□□□□ 0.56
CLIP2-203ENST00000395060 COG6Q9Y2V7 657 aa18.55■□□□□ 0.56
CLIP2-203ENST00000395060 DMRT2Q9Y5R5 561 aa18.55■□□□□ 0.56
CLIP2-203ENST00000395060 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.54■□□□□ 0.56
CLIP2-203ENST00000395060 PANK1Q8TE04 598 aa18.54■□□□□ 0.56
CLIP2-203ENST00000395060 SYCP2Q9BX26 1530 aa18.54■□□□□ 0.56
CLIP2-203ENST00000395060 AFAP1Q8N556 730 aa18.54■□□□□ 0.56
CLIP2-203ENST00000395060 CROCC2H7BZ55 1655 aa18.54■□□□□ 0.56
CLIP2-203ENST00000395060 SAMD9LQ8IVG5 1584 aa18.53■□□□□ 0.56
CLIP2-203ENST00000395060 RSPH4AQ5TD94 716 aa18.53■□□□□ 0.56
CLIP2-203ENST00000395060 BCL2L13Q9BXK5 485 aa18.53■□□□□ 0.56
CLIP2-203ENST00000395060 GZF1Q9H116 711 aaPredicted RBP18.52■□□□□ 0.56
CLIP2-203ENST00000395060 PRAG1Q86YV5 1406 aa18.52■□□□□ 0.56
CLIP2-203ENST00000395060 EFCAB2Q5VUJ9 269 aa18.51■□□□□ 0.55
CLIP2-203ENST00000395060 RRP7AQ9Y3A4 280 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms