RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 KDM5DQ9BY66 1539 aa25.68■■□□□ 1.7
SNCA-205ENST00000394991 CEP162Q5TB80 1403 aa25.68■■□□□ 1.7
SNCA-205ENST00000394991 TNRQ92752 1358 aa25.68■■□□□ 1.7
SNCA-205ENST00000394991 PZPP20742 1482 aa25.67■■□□□ 1.7
SNCA-205ENST00000394991 FBXO31Q5XUX0 539 aaPredicted RBP25.66■■□□□ 1.7
SNCA-205ENST00000394991 CPS1P31327 1500 aa25.66■■□□□ 1.7
SNCA-205ENST00000394991 FAM135AQ9P2D6 1515 aa25.66■■□□□ 1.7
SNCA-205ENST00000394991 CCDC141Q6ZP82 1450 aa25.65■■□□□ 1.7
SNCA-205ENST00000394991 MED1Q15648 1581 aaPredicted RBP25.65■■□□□ 1.7
SNCA-205ENST00000394991 SHANK2Q9UPX8 1470 aa25.64■■□□□ 1.69
SNCA-205ENST00000394991 CAMSAP2Q08AD1 1489 aa25.63■■□□□ 1.69
SNCA-205ENST00000394991 VWDEQ8N2E2 1590 aa25.63■■□□□ 1.69
SNCA-205ENST00000394991 KIF3BO15066 747 aa25.62■■□□□ 1.69
SNCA-205ENST00000394991 HSPA1LP34931 641 aa25.6■■□□□ 1.69
SNCA-205ENST00000394991 ALKQ9UM73 1620 aa25.59■■□□□ 1.69
SNCA-205ENST00000394991 DEPDC5O75140 1603 aa25.58■■□□□ 1.69
SNCA-205ENST00000394991 NCOA2Q15596 1464 aa25.58■■□□□ 1.69
SNCA-205ENST00000394991 SCAF1Q9H7N4 1312 aaKnown RBP25.58■■□□□ 1.69
SNCA-205ENST00000394991 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.57■■□□□ 1.68
SNCA-205ENST00000394991 PIP4K2BP78356 416 aa25.57■■□□□ 1.68
SNCA-205ENST00000394991 UGGT1Q9NYU2 1555 aa25.56■■□□□ 1.68
SNCA-205ENST00000394991 NLRP1Q9C000 1473 aa25.55■■□□□ 1.68
SNCA-205ENST00000394991 ARHGEF5Q12774 1597 aa25.55■■□□□ 1.68
SNCA-205ENST00000394991 MIA2Q96PC5 1412 aa25.54■■□□□ 1.68
SNCA-205ENST00000394991 MED14O60244 1454 aa25.54■■□□□ 1.68
SNCA-205ENST00000394991 STRCP1A6NGW2 1772 aa25.54■■□□□ 1.68
SNCA-205ENST00000394991 IQGAP1P46940 1657 aa25.54■■□□□ 1.68
SNCA-205ENST00000394991 TOM1O60784 492 aa25.53■■□□□ 1.68
SNCA-205ENST00000394991 WASHC2CQ9Y4E1 1318 aa25.53■■□□□ 1.68
SNCA-205ENST00000394991 NPHP4O75161 1426 aaPredicted RBP25.53■■□□□ 1.68
SNCA-205ENST00000394991 RNF17Q9BXT8 1623 aaKnown RBP25.52■■□□□ 1.68
SNCA-205ENST00000394991 ANKLE2Q86XL3 938 aa25.52■■□□□ 1.68
SNCA-205ENST00000394991 ZC3H13Q5T200 1668 aaKnown RBP25.49■■□□□ 1.67
SNCA-205ENST00000394991 THEMISQ8N1K5 641 aaPredicted RBP25.48■■□□□ 1.67
SNCA-205ENST00000394991 ABCC3O15438 1527 aa25.47■■□□□ 1.67
SNCA-205ENST00000394991 RSPH4AQ5TD94 716 aa25.47■■□□□ 1.67
SNCA-205ENST00000394991 CFAP65Q6ZU64 1925 aaKnown RBP25.45■■□□□ 1.67
SNCA-205ENST00000394991 MROH1Q8NDA8 1641 aa25.45■■□□□ 1.67
SNCA-205ENST00000394991 MAST1Q9Y2H9 1570 aa25.45■■□□□ 1.66
SNCA-205ENST00000394991 CEP152O94986 1710 aa25.44■■□□□ 1.66
SNCA-205ENST00000394991 EIF2AK4Q9P2K8 1649 aaKnown RBP25.44■■□□□ 1.66
SNCA-205ENST00000394991 SYNMO15061 1565 aa25.44■■□□□ 1.66
SNCA-205ENST00000394991 ERVK-7P63135 1459 aa25.42■■□□□ 1.66
SNCA-205ENST00000394991 UBR1Q8IWV7 1749 aa25.42■■□□□ 1.66
SNCA-205ENST00000394991 LRRC7Q96NW7 1537 aa25.42■■□□□ 1.66
SNCA-205ENST00000394991 TSPY4P0CV99 314 aa25.38■■□□□ 1.65
SNCA-205ENST00000394991 TSPY10P0CW01 314 aa25.38■■□□□ 1.65
SNCA-205ENST00000394991 XIRP1Q702N8 1843 aaKnown RBP25.35■■□□□ 1.65
SNCA-205ENST00000394991 LRRC9Q6ZRR7 1453 aa25.34■■□□□ 1.65
SNCA-205ENST00000394991 PHF23Q9BUL5 403 aaPredicted RBP25.31■■□□□ 1.64
SNCA-205ENST00000394991 SCAF11Q99590 1463 aaKnown RBP25.3■■□□□ 1.64
SNCA-205ENST00000394991 SENP3Q9H4L4 574 aaPredicted RBP25.3■■□□□ 1.64
SNCA-205ENST00000394991 ARHGAP23Q9P227 1491 aa25.28■■□□□ 1.64
SNCA-205ENST00000394991 SLIT1O75093 1534 aa25.27■■□□□ 1.64
SNCA-205ENST00000394991 DUOX2Q9NRD8 1548 aa25.27■■□□□ 1.64
SNCA-205ENST00000394991 VPS8Q8N3P4 1428 aa25.26■■□□□ 1.63
SNCA-205ENST00000394991 PRDM15P57071 1507 aaPredicted RBP25.26■■□□□ 1.63
SNCA-205ENST00000394991 CROCC2H7BZ55 1655 aa25.25■■□□□ 1.63
SNCA-205ENST00000394991 PIK3C2BO00750 1634 aa25.23■■□□□ 1.63
SNCA-205ENST00000394991 MYOM3Q5VTT5 1437 aa25.23■■□□□ 1.63
SNCA-205ENST00000394991 LTKP29376 864 aa25.23■■□□□ 1.63
SNCA-205ENST00000394991 ARHGAP31Q2M1Z3 1444 aa25.2■■□□□ 1.63
SNCA-205ENST00000394991 KANK4Q5T7N3 995 aaPredicted RBP25.2■■□□□ 1.62
SNCA-205ENST00000394991 MAP3K1Q13233 1512 aa25.19■■□□□ 1.62
SNCA-205ENST00000394991 TXNDC2Q86VQ3 553 aa25.18■■□□□ 1.62
SNCA-205ENST00000394991 RGS17Q9UGC6 210 aaPredicted RBP25.16■■□□□ 1.62
SNCA-205ENST00000394991 KIF15Q9NS87 1388 aa25.16■■□□□ 1.62
SNCA-205ENST00000394991 ERBINQ96RT1 1412 aa25.15■■□□□ 1.62
SNCA-205ENST00000394991 KDM5AP29375 1690 aaKnown RBP25.14■■□□□ 1.62
SNCA-205ENST00000394991 ABCC5O15440 1437 aa25.12■■□□□ 1.61
SNCA-205ENST00000394991 PTPN23Q9H3S7 1636 aa25.12■■□□□ 1.61
SNCA-205ENST00000394991 TMEM2Q9UHN6 1383 aa25.11■■□□□ 1.61
SNCA-205ENST00000394991 EFCAB6Q5THR3 1501 aa25.09■■□□□ 1.61
SNCA-205ENST00000394991 EID1Q9Y6B2 187 aa25.09■■□□□ 1.61
SNCA-205ENST00000394991 FAM135BQ49AJ0 1406 aa25.09■■□□□ 1.61
SNCA-205ENST00000394991 ROBO1Q9Y6N7 1651 aa25.08■■□□□ 1.61
SNCA-205ENST00000394991 RRP7BPQ9NSQ0 103 aa25.07■■□□□ 1.6
SNCA-205ENST00000394991 TET3O43151 1660 aa25.07■■□□□ 1.6
SNCA-205ENST00000394991 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.06■■□□□ 1.6
SNCA-205ENST00000394991 LMTK2Q8IWU2 1503 aa25.06■■□□□ 1.6
SNCA-205ENST00000394991 TMEM94Q12767 1356 aa25.05■■□□□ 1.6
SNCA-205ENST00000394991 DAPK1P53355 1430 aa25.05■■□□□ 1.6
SNCA-205ENST00000394991 NWD1Q149M9 1564 aa25.03■■□□□ 1.6
SNCA-205ENST00000394991 LOC105371045A0A1W2PR82 267 aa25.03■■□□□ 1.6
SNCA-205ENST00000394991 ADGRB3O60242 1522 aa25.02■■□□□ 1.6
SNCA-205ENST00000394991 IDI1Q13907 227 aa25.01■■□□□ 1.59
SNCA-205ENST00000394991 KANK1Q14678 1352 aa25.01■■□□□ 1.59
SNCA-205ENST00000394991 KCNA6P17658 529 aa25■■□□□ 1.59
SNCA-205ENST00000394991 STAG3Q9UJ98 1225 aa25■■□□□ 1.59
SNCA-205ENST00000394991 NOS1P29475 1434 aa24.99■■□□□ 1.59
SNCA-205ENST00000394991 MYO5BQ9ULV0 1848 aa24.99■■□□□ 1.59
SNCA-205ENST00000394991 POTEAQ6S8J7 498 aa24.98■■□□□ 1.59
SNCA-205ENST00000394991 RBM33Q96EV2 1170 aaKnown RBP24.98■■□□□ 1.59
SNCA-205ENST00000394991 SLC26A8Q96RN1 970 aa24.98■■□□□ 1.59
SNCA-205ENST00000394991 NKTRP30414 1462 aaKnown RBP24.97■■□□□ 1.59
SNCA-205ENST00000394991 FGD6Q6ZV73 1430 aa24.96■■□□□ 1.59
SNCA-205ENST00000394991 PROSER2Q86WR7 435 aaPredicted RBP24.95■■□□□ 1.58
SNCA-205ENST00000394991 SETD1AO15047 1707 aaKnown RBP24.94■■□□□ 1.58
SNCA-205ENST00000394991 PHLPP1O60346 1717 aa24.94■■□□□ 1.58
SNCA-205ENST00000394991 CHD2O14647 1828 aaKnown RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms