RNA–Protein interactions for RNA: ENST00000394921.8

PMS2P3-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 2

Gene PMS2P3, Length 1,316 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-201ENST00000394921 MYO3AQ8NEV4 1616 aa35.9■■■■□ 3.34
PMS2P3-201ENST00000394921 RNF17Q9BXT8 1623 aaKnown RBP35.89■■■■□ 3.34
PMS2P3-201ENST00000394921 SHANK2Q9UPX8 1470 aa35.88■■■■□ 3.33
PMS2P3-201ENST00000394921 ZNF142P52746 1687 aaPredicted RBP35.87■■■■□ 3.33
PMS2P3-201ENST00000394921 EIF2AK4Q9P2K8 1649 aaKnown RBP35.86■■■■□ 3.33
PMS2P3-201ENST00000394921 NCOA1Q15788 1441 aa35.86■■■■□ 3.33
PMS2P3-201ENST00000394921 DNMT1P26358 1616 aaKnown RBP35.85■■■■□ 3.33
PMS2P3-201ENST00000394921 DMRT2Q9Y5R5 561 aa35.83■■■■□ 3.33
PMS2P3-201ENST00000394921 WASHC2CQ9Y4E1 1318 aa35.83■■■■□ 3.33
PMS2P3-201ENST00000394921 DAPK1P53355 1430 aa35.83■■■■□ 3.33
PMS2P3-201ENST00000394921 PZPP20742 1482 aa35.83■■■■□ 3.33
PMS2P3-201ENST00000394921 CAMSAP1Q5T5Y3 1602 aa35.83■■■■□ 3.33
PMS2P3-201ENST00000394921 DUOX2Q9NRD8 1548 aa35.83■■■■□ 3.33
PMS2P3-201ENST00000394921 CEP170BQ9Y4F5 1589 aaPredicted RBP35.82■■■■□ 3.32
PMS2P3-201ENST00000394921 PTPRTO14522 1441 aa35.8■■■■□ 3.32
PMS2P3-201ENST00000394921 FBXO41Q8TF61 875 aa35.8■■■■□ 3.32
PMS2P3-201ENST00000394921 MROH1Q8NDA8 1641 aa35.79■■■■□ 3.32
PMS2P3-201ENST00000394921 FBXO31Q5XUX0 539 aaPredicted RBP35.79■■■■□ 3.32
PMS2P3-201ENST00000394921 KIF15Q9NS87 1388 aa35.78■■■■□ 3.32
PMS2P3-201ENST00000394921 ABCC3O15438 1527 aa35.76■■■■□ 3.32
PMS2P3-201ENST00000394921 TNRQ92752 1358 aa35.74■■■■□ 3.31
PMS2P3-201ENST00000394921 ZC3H13Q5T200 1668 aaKnown RBP35.73■■■■□ 3.31
PMS2P3-201ENST00000394921 A2ML1A8K2U0 1454 aa35.73■■■■□ 3.31
PMS2P3-201ENST00000394921 RRP7BPQ9NSQ0 103 aa35.72■■■■□ 3.31
PMS2P3-201ENST00000394921 PLA2R1Q13018 1463 aa35.71■■■■□ 3.31
PMS2P3-201ENST00000394921 ERBINQ96RT1 1412 aa35.7■■■■□ 3.31
PMS2P3-201ENST00000394921 CERKQ8TCT0 537 aa35.7■■■■□ 3.31
PMS2P3-201ENST00000394921 NCKAP5LQ9HCH0 1330 aa35.67■■■■□ 3.3
PMS2P3-201ENST00000394921 CEP152O94986 1710 aa35.66■■■■□ 3.3
PMS2P3-201ENST00000394921 CHIC2Q9UKJ5 165 aa35.65■■■■□ 3.3
PMS2P3-201ENST00000394921 ANKRD30AQ9BXX3 1397 aa35.64■■■■□ 3.3
PMS2P3-201ENST00000394921 PRDM15P57071 1507 aaPredicted RBP35.63■■■■□ 3.29
PMS2P3-201ENST00000394921 FAM50AQ14320 339 aaKnown RBP35.61■■■■□ 3.29
PMS2P3-201ENST00000394921 DEPDC5O75140 1603 aa35.61■■■■□ 3.29
PMS2P3-201ENST00000394921 PKD2Q13563 968 aa35.6■■■■□ 3.29
PMS2P3-201ENST00000394921 ADGRL2O95490 1459 aa35.6■■■■□ 3.29
PMS2P3-201ENST00000394921 SPATA31D1Q6ZQQ2 1576 aa35.6■■■■□ 3.29
PMS2P3-201ENST00000394921 NLRP1Q9C000 1473 aa35.58■■■■□ 3.29
PMS2P3-201ENST00000394921 ERVK-7P63135 1459 aa35.57■■■■□ 3.28
PMS2P3-201ENST00000394921 LTBP4Q8N2S1 1624 aa35.56■■■■□ 3.28
PMS2P3-201ENST00000394921 CFAP65Q6ZU64 1925 aaKnown RBP35.53■■■■□ 3.28
PMS2P3-201ENST00000394921 ARHGAP31Q2M1Z3 1444 aa35.51■■■■□ 3.27
PMS2P3-201ENST00000394921 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.5■■■■□ 3.273e-12■■■■□ 22.5
PMS2P3-201ENST00000394921 UGGT1Q9NYU2 1555 aa35.49■■■■□ 3.27
PMS2P3-201ENST00000394921 POLR1AO95602 1720 aaPredicted RBP35.48■■■■□ 3.27
PMS2P3-201ENST00000394921 VWDEQ8N2E2 1590 aa35.47■■■■□ 3.27
PMS2P3-201ENST00000394921 NEURL4Q96JN8 1562 aa35.47■■■■□ 3.27
PMS2P3-201ENST00000394921 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.45■■■■□ 3.273e-8■□□□□ 9.1
PMS2P3-201ENST00000394921 PPARGC1BQ86YN6 1023 aaKnown RBP35.45■■■■□ 3.27
PMS2P3-201ENST00000394921 KANK1Q14678 1352 aa35.44■■■■□ 3.26
PMS2P3-201ENST00000394921 THEMISQ8N1K5 641 aaPredicted RBP35.44■■■■□ 3.26
PMS2P3-201ENST00000394921 LMTK2Q8IWU2 1503 aa35.44■■■■□ 3.26
PMS2P3-201ENST00000394921 ZNF335Q9H4Z2 1342 aaPredicted RBP35.42■■■■□ 3.26
PMS2P3-201ENST00000394921 ANKRD50Q9ULJ7 1429 aa35.4■■■■□ 3.26
PMS2P3-201ENST00000394921 ANKLE2Q86XL3 938 aa35.36■■■■□ 3.25
PMS2P3-201ENST00000394921 UBR1Q8IWV7 1749 aa35.36■■■■□ 3.25
PMS2P3-201ENST00000394921 IQSEC2Q5JU85 1478 aa35.34■■■■□ 3.25
PMS2P3-201ENST00000394921 MED14O60244 1454 aa35.33■■■■□ 3.25
PMS2P3-201ENST00000394921 EFCAB6Q5THR3 1501 aa35.32■■■■□ 3.24
PMS2P3-201ENST00000394921 ROCK1Q13464 1354 aa35.32■■■■□ 3.24
PMS2P3-201ENST00000394921 NPHP4O75161 1426 aaPredicted RBP35.28■■■■□ 3.24
PMS2P3-201ENST00000394921 PIK3C2BO00750 1634 aa35.25■■■■□ 3.23
PMS2P3-201ENST00000394921 UNC13BO14795 1591 aa35.24■■■■□ 3.23
PMS2P3-201ENST00000394921 SYNMO15061 1565 aa35.24■■■■□ 3.23
PMS2P3-201ENST00000394921 NOS1P29475 1434 aa35.24■■■■□ 3.23
PMS2P3-201ENST00000394921 IQGAP1P46940 1657 aa35.23■■■■□ 3.23
PMS2P3-201ENST00000394921 ARHGAP23Q9P227 1491 aa35.23■■■■□ 3.23
PMS2P3-201ENST00000394921 SLIT1O75093 1534 aa35.21■■■■□ 3.23
PMS2P3-201ENST00000394921 ITGAEP38570 1179 aa35.21■■■■□ 3.23
PMS2P3-201ENST00000394921 TET3O43151 1660 aa35.2■■■■□ 3.22
PMS2P3-201ENST00000394921 IDI1Q13907 227 aa35.18■■■■□ 3.22
PMS2P3-201ENST00000394921 RRBP1Q9P2E9 1410 aaKnown RBP35.17■■■■□ 3.22
PMS2P3-201ENST00000394921 RPRD2Q5VT52 1461 aaKnown RBP35.17■■■■□ 3.22
PMS2P3-201ENST00000394921 SCAF11Q99590 1463 aaKnown RBP35.17■■■■□ 3.22
PMS2P3-201ENST00000394921 KDM5AP29375 1690 aaKnown RBP35.17■■■■□ 3.22
PMS2P3-201ENST00000394921 LTKP29376 864 aa35.15■■■■□ 3.22
PMS2P3-201ENST00000394921 CPS1P31327 1500 aa35.14■■■■□ 3.22
PMS2P3-201ENST00000394921 GCC2Q8IWJ2 1684 aa35.14■■■■□ 3.22
PMS2P3-201ENST00000394921 TMEM2Q9UHN6 1383 aa35.11■■■■□ 3.21
PMS2P3-201ENST00000394921 TXNDC2Q86VQ3 553 aa35.1■■■■□ 3.21
PMS2P3-201ENST00000394921 IQGAP3Q86VI3 1631 aa35.09■■■■□ 3.21
PMS2P3-201ENST00000394921 STAG3Q9UJ98 1225 aa35.07■■■■□ 3.21
PMS2P3-201ENST00000394921 ADGRB3O60242 1522 aa35.07■■■■□ 3.2
PMS2P3-201ENST00000394921 SLC52A1Q9NWF4 448 aa35.06■■■■□ 3.2
PMS2P3-201ENST00000394921 STRCP1A6NGW2 1772 aa35.06■■■■□ 3.2
PMS2P3-201ENST00000394921 E9PCH4 1651 aa35.06■■■■□ 3.2
PMS2P3-201ENST00000394921 UBAP1LF5GYI3 381 aa35.04■■■■□ 3.2
PMS2P3-201ENST00000394921 EID1Q9Y6B2 187 aa35.04■■■■□ 3.2
PMS2P3-201ENST00000394921 NUP155O75694 1391 aa35.01■■■■□ 3.2
PMS2P3-201ENST00000394921 MYO5BQ9ULV0 1848 aa34.96■■■■□ 3.19
PMS2P3-201ENST00000394921 TMEM131LA2VDJ0 1609 aa34.93■■■■□ 3.18
PMS2P3-201ENST00000394921 LRRC7Q96NW7 1537 aa34.93■■■■□ 3.18
PMS2P3-201ENST00000394921 NAIPQ13075 1403 aa34.92■■■■□ 3.18
PMS2P3-201ENST00000394921 ZFYVE9O95405 1425 aa34.9■■■■□ 3.18
PMS2P3-201ENST00000394921 ALKQ9UM73 1620 aa34.86■■■■□ 3.17
PMS2P3-201ENST00000394921 TOM1O60784 492 aa34.83■■■■□ 3.17
PMS2P3-201ENST00000394921 RIMS2Q9UQ26 1411 aa34.83■■■■□ 3.17
PMS2P3-201ENST00000394921 SLC26A8Q96RN1 970 aa34.81■■■■□ 3.16
PMS2P3-201ENST00000394921 HFM1A2PYH4 1435 aa34.81■■■■□ 3.16
PMS2P3-201ENST00000394921 SPHKAPQ2M3C7 1700 aa34.79■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms