RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 FAM135AQ9P2D6 1515 aa13.23□□□□□ -0.29
APLF-202ENST00000394342 DUOX2Q9NRD8 1548 aa13.23□□□□□ -0.29
APLF-202ENST00000394342 ZC3H13Q5T200 1668 aaKnown RBP13.22□□□□□ -0.29
APLF-202ENST00000394342 ESF1Q9H501 851 aaKnown RBP13.21□□□□□ -0.29
APLF-202ENST00000394342 SCAF1Q9H7N4 1312 aaKnown RBP13.2□□□□□ -0.3
APLF-202ENST00000394342 CEP152O94986 1710 aa13.2□□□□□ -0.3
APLF-202ENST00000394342 DEPDC5O75140 1603 aa13.19□□□□□ -0.3
APLF-202ENST00000394342 KDM5DQ9BY66 1539 aa13.18□□□□□ -0.3
APLF-202ENST00000394342 ADGRL2O95490 1459 aa13.18□□□□□ -0.3
APLF-202ENST00000394342 LMTK3Q96Q04 1460 aa13.18□□□□□ -0.3
APLF-202ENST00000394342 MROH1Q8NDA8 1641 aa13.17□□□□□ -0.3
APLF-202ENST00000394342 ERBINQ96RT1 1412 aa13.17□□□□□ -0.3
APLF-202ENST00000394342 KIF3BO15066 747 aa13.17□□□□□ -0.3
APLF-202ENST00000394342 FAM50AQ14320 339 aaKnown RBP13.17□□□□□ -0.3
APLF-202ENST00000394342 GGT6Q6P531 493 aa13.17□□□□□ -0.3
APLF-202ENST00000394342 KIF15Q9NS87 1388 aa13.17□□□□□ -0.3
APLF-202ENST00000394342 ANKRD30AQ9BXX3 1397 aa13.16□□□□□ -0.3
APLF-202ENST00000394342 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.16□□□□□ -0.3
APLF-202ENST00000394342 ZNF142P52746 1687 aaPredicted RBP13.15□□□□□ -0.3
APLF-202ENST00000394342 CEBPAP49715 358 aaPredicted RBP13.15□□□□□ -0.3
APLF-202ENST00000394342 ZMYM3Q14202 1370 aa13.15□□□□□ -0.3
APLF-202ENST00000394342 NPATQ14207 1427 aa13.14□□□□□ -0.31
APLF-202ENST00000394342 NCOA1Q15788 1441 aa13.14□□□□□ -0.31
APLF-202ENST00000394342 PRDM15P57071 1507 aaPredicted RBP13.14□□□□□ -0.31
APLF-202ENST00000394342 CAMSAP1Q5T5Y3 1602 aa13.14□□□□□ -0.31
APLF-202ENST00000394342 PPARGC1BQ86YN6 1023 aaKnown RBP13.14□□□□□ -0.31
APLF-202ENST00000394342 MYO3AQ8NEV4 1616 aa13.13□□□□□ -0.31
APLF-202ENST00000394342 PPP4R3CPQ6ZMV5 832 aa13.13□□□□□ -0.31
APLF-202ENST00000394342 ABCC3O15438 1527 aa13.13□□□□□ -0.31
APLF-202ENST00000394342 UHRF1BP1Q6BDS2 1440 aa13.13□□□□□ -0.31
APLF-202ENST00000394342 RRBP1Q9P2E9 1410 aaKnown RBP13.13□□□□□ -0.31
APLF-202ENST00000394342 RRP7BPQ9NSQ0 103 aa13.12□□□□□ -0.31
APLF-202ENST00000394342 CHIC2Q9UKJ5 165 aa13.12□□□□□ -0.31
APLF-202ENST00000394342 STRCQ7RTU9 1775 aa13.11□□□□□ -0.31
APLF-202ENST00000394342 PTPRKQ15262 1439 aa13.11□□□□□ -0.31
APLF-202ENST00000394342 PZPP20742 1482 aa13.1□□□□□ -0.31
APLF-202ENST00000394342 MAPK8IP2Q13387 824 aaPredicted RBP13.1□□□□□ -0.31
APLF-202ENST00000394342 WASHC2CQ9Y4E1 1318 aa13.1□□□□□ -0.31
APLF-202ENST00000394342 ROCK1Q13464 1354 aa13.09□□□□□ -0.31
APLF-202ENST00000394342 UNC13BO14795 1591 aa13.08□□□□□ -0.32
APLF-202ENST00000394342 VWDEQ8N2E2 1590 aa13.08□□□□□ -0.32
APLF-202ENST00000394342 GCC2Q8IWJ2 1684 aa13.08□□□□□ -0.32
APLF-202ENST00000394342 CEP170BQ9Y4F5 1589 aaPredicted RBP13.07□□□□□ -0.32
APLF-202ENST00000394342 ANKRD50Q9ULJ7 1429 aa13.06□□□□□ -0.32
APLF-202ENST00000394342 LMTK2Q8IWU2 1503 aa13.06□□□□□ -0.32
APLF-202ENST00000394342 SPATA31D1Q6ZQQ2 1576 aa13.06□□□□□ -0.32
APLF-202ENST00000394342 TET3O43151 1660 aa13.05□□□□□ -0.32
APLF-202ENST00000394342 POLR1AO95602 1720 aaPredicted RBP13.05□□□□□ -0.32
APLF-202ENST00000394342 KANK1Q14678 1352 aa13.05□□□□□ -0.32
APLF-202ENST00000394342 HSPA2P54652 639 aa13.04□□□□□ -0.32
APLF-202ENST00000394342 DMRT2Q9Y5R5 561 aa13.04□□□□□ -0.32
APLF-202ENST00000394342 ARHGAP31Q2M1Z3 1444 aa13.04□□□□□ -0.32
APLF-202ENST00000394342 IQGAP3Q86VI3 1631 aa13.03□□□□□ -0.32
APLF-202ENST00000394342 TNRQ92752 1358 aa13.03□□□□□ -0.32
APLF-202ENST00000394342 A2ML1A8K2U0 1454 aa13.03□□□□□ -0.32
APLF-202ENST00000394342 EFCAB6Q5THR3 1501 aa13.03□□□□□ -0.32
APLF-202ENST00000394342 ITGAEP38570 1179 aa13.02□□□□□ -0.33
APLF-202ENST00000394342 ERVK-7P63135 1459 aa13.02□□□□□ -0.33
APLF-202ENST00000394342 NCBP3Q53F19 620 aaKnown RBP13.01□□□□□ -0.33
APLF-202ENST00000394342 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.01□□□□□ -0.33
APLF-202ENST00000394342 NLRP1Q9C000 1473 aa13.01□□□□□ -0.33
APLF-202ENST00000394342 UBR1Q8IWV7 1749 aa13.01□□□□□ -0.33
APLF-202ENST00000394342 KDM5AP29375 1690 aaKnown RBP13□□□□□ -0.33
APLF-202ENST00000394342 FBXO31Q5XUX0 539 aaPredicted RBP13□□□□□ -0.33
APLF-202ENST00000394342 MYO5BQ9ULV0 1848 aa12.99□□□□□ -0.33
APLF-202ENST00000394342 E9PCH4 1651 aa12.99□□□□□ -0.33
APLF-202ENST00000394342 PLA2R1Q13018 1463 aa12.99□□□□□ -0.33
APLF-202ENST00000394342 RPRD2Q5VT52 1461 aaKnown RBP12.97□□□□□ -0.33
APLF-202ENST00000394342 UGGT1Q9NYU2 1555 aa12.97□□□□□ -0.33
APLF-202ENST00000394342 PIK3C2BO00750 1634 aa12.96□□□□□ -0.33
APLF-202ENST00000394342 SYNMO15061 1565 aa12.96□□□□□ -0.33
APLF-202ENST00000394342 SPHKAPQ2M3C7 1700 aa12.96□□□□□ -0.34
APLF-202ENST00000394342 NAIPQ13075 1403 aa12.96□□□□□ -0.34
APLF-202ENST00000394342 HFM1A2PYH4 1435 aa12.95□□□□□ -0.34
APLF-202ENST00000394342 PTPRTO14522 1441 aa12.95□□□□□ -0.34
APLF-202ENST00000394342 NOS1P29475 1434 aa12.93□□□□□ -0.34
APLF-202ENST00000394342 PKD2Q13563 968 aa12.92□□□□□ -0.34
APLF-202ENST00000394342 NEURL4Q96JN8 1562 aa12.92□□□□□ -0.34
APLF-202ENST00000394342 THEMISQ8N1K5 641 aaPredicted RBP12.91□□□□□ -0.34
APLF-202ENST00000394342 IQGAP1P46940 1657 aa12.91□□□□□ -0.34
APLF-202ENST00000394342 NUP155O75694 1391 aa12.91□□□□□ -0.34
APLF-202ENST00000394342 ADGRB3O60242 1522 aa12.9□□□□□ -0.34
APLF-202ENST00000394342 KIF1BO60333 1816 aa12.9□□□□□ -0.34
APLF-202ENST00000394342 NCKAP5LQ9HCH0 1330 aa12.88□□□□□ -0.35
APLF-202ENST00000394342 SLIT1O75093 1534 aa12.88□□□□□ -0.35
APLF-202ENST00000394342 TMEM131LA2VDJ0 1609 aa12.88□□□□□ -0.35
APLF-202ENST00000394342 MED14O60244 1454 aa12.87□□□□□ -0.35
APLF-202ENST00000394342 ARHGAP23Q9P227 1491 aa12.87□□□□□ -0.35
APLF-202ENST00000394342 SLC4A1APQ9BWU0 796 aaKnown RBP12.87□□□□□ -0.35
APLF-202ENST00000394342 ANKLE2Q86XL3 938 aa12.86□□□□□ -0.35
APLF-202ENST00000394342 SLC52A1Q9NWF4 448 aa12.86□□□□□ -0.35
APLF-202ENST00000394342 LTBP4Q8N2S1 1624 aa12.84□□□□□ -0.35
APLF-202ENST00000394342 IDI1Q13907 227 aa12.84□□□□□ -0.35
APLF-202ENST00000394342 SCAF11Q99590 1463 aaKnown RBP12.84□□□□□ -0.35
APLF-202ENST00000394342 NPHP4O75161 1426 aaPredicted RBP12.83□□□□□ -0.36
APLF-202ENST00000394342 TRPM2O94759 1503 aa12.83□□□□□ -0.36
APLF-202ENST00000394342 STRCP1A6NGW2 1772 aa12.82□□□□□ -0.36
APLF-202ENST00000394342 CLTCL1P53675 1640 aa12.82□□□□□ -0.36
APLF-202ENST00000394342 STAG3Q9UJ98 1225 aa12.82□□□□□ -0.36
APLF-202ENST00000394342 ACIN1Q9UKV3 1341 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms