RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 A2ML1A8K2U0 1454 aa29.56■■■□□ 2.32
SNCB-202ENST00000393693 LOC105371045A0A1W2PR82 267 aa29.55■■■□□ 2.32
SNCB-202ENST00000393693 DNMT1P26358 1616 aaKnown RBP29.53■■■□□ 2.32
SNCB-202ENST00000393693 WASHC2CQ9Y4E1 1318 aa29.53■■■□□ 2.32
SNCB-202ENST00000393693 TNRQ92752 1358 aa29.52■■■□□ 2.32
SNCB-202ENST00000393693 TSPY4P0CV99 314 aa29.51■■■□□ 2.31
SNCB-202ENST00000393693 TSPY10P0CW01 314 aa29.51■■■□□ 2.31
SNCB-202ENST00000393693 KDM5DQ9BY66 1539 aa29.5■■■□□ 2.31
SNCB-202ENST00000393693 UBAP1LF5GYI3 381 aa29.5■■■□□ 2.31
SNCB-202ENST00000393693 PZPP20742 1482 aa29.49■■■□□ 2.31
SNCB-202ENST00000393693 LRRC9Q6ZRR7 1453 aa29.48■■■□□ 2.31
SNCB-202ENST00000393693 ARHGEF5Q12774 1597 aa29.47■■■□□ 2.31
SNCB-202ENST00000393693 VPS8Q8N3P4 1428 aa29.47■■■□□ 2.31
SNCB-202ENST00000393693 KANK4Q5T7N3 995 aaPredicted RBP29.46■■■□□ 2.31
SNCB-202ENST00000393693 FAM135AQ9P2D6 1515 aa29.42■■■□□ 2.3
SNCB-202ENST00000393693 MIA2Q96PC5 1412 aa29.42■■■□□ 2.3
SNCB-202ENST00000393693 SPATA31D1Q6ZQQ2 1576 aa29.42■■■□□ 2.3
SNCB-202ENST00000393693 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.41■■■□□ 2.3
SNCB-202ENST00000393693 NEURL4Q96JN8 1562 aa29.39■■■□□ 2.3
SNCB-202ENST00000393693 ANKLE2Q86XL3 938 aa29.37■■■□□ 2.29
SNCB-202ENST00000393693 THEMISQ8N1K5 641 aaPredicted RBP29.36■■■□□ 2.29
SNCB-202ENST00000393693 POLR1AO95602 1720 aaPredicted RBP29.35■■■□□ 2.29
SNCB-202ENST00000393693 NLRP1Q9C000 1473 aa29.34■■■□□ 2.29
SNCB-202ENST00000393693 MAST1Q9Y2H9 1570 aa29.34■■■□□ 2.29
SNCB-202ENST00000393693 SOCS7O14512 581 aa29.33■■■□□ 2.29
SNCB-202ENST00000393693 UGGT1Q9NYU2 1555 aa29.32■■■□□ 2.28
SNCB-202ENST00000393693 ABCC3O15438 1527 aa29.31■■■□□ 2.28
SNCB-202ENST00000393693 SHANK2Q9UPX8 1470 aa29.31■■■□□ 2.28
SNCB-202ENST00000393693 RNF17Q9BXT8 1623 aaKnown RBP29.31■■■□□ 2.28
SNCB-202ENST00000393693 MYOM3Q5VTT5 1437 aa29.3■■■□□ 2.28
SNCB-202ENST00000393693 MAP3K1Q13233 1512 aa29.3■■■□□ 2.28
SNCB-202ENST00000393693 NPHP4O75161 1426 aaPredicted RBP29.28■■■□□ 2.28
SNCB-202ENST00000393693 SCAF1Q9H7N4 1312 aaKnown RBP29.27■■■□□ 2.28
SNCB-202ENST00000393693 CPS1P31327 1500 aa29.27■■■□□ 2.28
SNCB-202ENST00000393693 PIP4K2BP78356 416 aa29.27■■■□□ 2.28
SNCB-202ENST00000393693 MROH1Q8NDA8 1641 aa29.25■■■□□ 2.27
SNCB-202ENST00000393693 VWDEQ8N2E2 1590 aa29.25■■■□□ 2.27
SNCB-202ENST00000393693 MED14O60244 1454 aa29.24■■■□□ 2.27
SNCB-202ENST00000393693 EIF2AK4Q9P2K8 1649 aaKnown RBP29.23■■■□□ 2.27
SNCB-202ENST00000393693 ERVK-7P63135 1459 aa29.23■■■□□ 2.27
SNCB-202ENST00000393693 ZC3H13Q5T200 1668 aaKnown RBP29.22■■■□□ 2.27
SNCB-202ENST00000393693 TOM1O60784 492 aa29.22■■■□□ 2.27
SNCB-202ENST00000393693 HSPA1LP34931 641 aa29.22■■■□□ 2.27
SNCB-202ENST00000393693 DEPDC5O75140 1603 aa29.21■■■□□ 2.27
SNCB-202ENST00000393693 DUOX2Q9NRD8 1548 aa29.19■■■□□ 2.26
SNCB-202ENST00000393693 CEP152O94986 1710 aa29.18■■■□□ 2.26
SNCB-202ENST00000393693 RRP7BPQ9NSQ0 103 aa29.18■■■□□ 2.26
SNCB-202ENST00000393693 ABCC5O15440 1437 aa29.17■■■□□ 2.26
SNCB-202ENST00000393693 KIF15Q9NS87 1388 aa29.16■■■□□ 2.26
SNCB-202ENST00000393693 IQGAP1P46940 1657 aa29.15■■■□□ 2.26
SNCB-202ENST00000393693 CFAP65Q6ZU64 1925 aaKnown RBP29.12■■■□□ 2.25
SNCB-202ENST00000393693 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.12■■■□□ 2.25
SNCB-202ENST00000393693 APLP2Q06481 763 aa29.11■■■□□ 2.25
SNCB-202ENST00000393693 PTPN23Q9H3S7 1636 aa29.1■■■□□ 2.25
SNCB-202ENST00000393693 ALKQ9UM73 1620 aa29.09■■■□□ 2.25
SNCB-202ENST00000393693 UBR1Q8IWV7 1749 aa29.08■■■□□ 2.25
SNCB-202ENST00000393693 STRCP1A6NGW2 1772 aa29.08■■■□□ 2.25
SNCB-202ENST00000393693 LTKP29376 864 aa29.08■■■□□ 2.25
SNCB-202ENST00000393693 ERBINQ96RT1 1412 aa29.08■■■□□ 2.25
SNCB-202ENST00000393693 DAPK1P53355 1430 aa29.07■■■□□ 2.24
SNCB-202ENST00000393693 PRDM15P57071 1507 aaPredicted RBP29.07■■■□□ 2.24
SNCB-202ENST00000393693 CROCC2H7BZ55 1655 aa29.06■■■□□ 2.24
SNCB-202ENST00000393693 LRRC7Q96NW7 1537 aa29.06■■■□□ 2.24
SNCB-202ENST00000393693 ARHGAP31Q2M1Z3 1444 aa29.06■■■□□ 2.24
SNCB-202ENST00000393693 CHIC2Q9UKJ5 165 aa29.06■■■□□ 2.24
SNCB-202ENST00000393693 TXNDC2Q86VQ3 553 aa29.05■■■□□ 2.24
SNCB-202ENST00000393693 SCAF11Q99590 1463 aaKnown RBP29.04■■■□□ 2.24
SNCB-202ENST00000393693 FGD6Q6ZV73 1430 aa29.03■■■□□ 2.24
SNCB-202ENST00000393693 SENP3Q9H4L4 574 aaPredicted RBP29.03■■■□□ 2.24
SNCB-202ENST00000393693 ARHGAP23Q9P227 1491 aa29.02■■■□□ 2.24
SNCB-202ENST00000393693 MED1Q15648 1581 aaPredicted RBP29.01■■■□□ 2.23
SNCB-202ENST00000393693 SLIT1O75093 1534 aa28.99■■■□□ 2.23
SNCB-202ENST00000393693 KANK1Q14678 1352 aa28.98■■■□□ 2.23
SNCB-202ENST00000393693 EID1Q9Y6B2 187 aa28.96■■■□□ 2.23
SNCB-202ENST00000393693 ANKRD30AQ9BXX3 1397 aa28.96■■■□□ 2.23
SNCB-202ENST00000393693 PIK3C2BO00750 1634 aa28.95■■■□□ 2.23
SNCB-202ENST00000393693 STAG3Q9UJ98 1225 aa28.95■■■□□ 2.22
SNCB-202ENST00000393693 SYNMO15061 1565 aa28.95■■■□□ 2.22
SNCB-202ENST00000393693 TMEM2Q9UHN6 1383 aa28.93■■■□□ 2.22
SNCB-202ENST00000393693 IDI1Q13907 227 aa28.93■■■□□ 2.22
SNCB-202ENST00000393693 LMTK2Q8IWU2 1503 aa28.9■■■□□ 2.22
SNCB-202ENST00000393693 EFCAB6Q5THR3 1501 aa28.85■■■□□ 2.21
SNCB-202ENST00000393693 FAM50AQ14320 339 aaKnown RBP28.85■■■□□ 2.21
SNCB-202ENST00000393693 PHF23Q9BUL5 403 aaPredicted RBP28.85■■■□□ 2.21
SNCB-202ENST00000393693 NOS1P29475 1434 aa28.83■■■□□ 2.21
SNCB-202ENST00000393693 SLC26A8Q96RN1 970 aa28.82■■■□□ 2.2
SNCB-202ENST00000393693 XIRP1Q702N8 1843 aaKnown RBP28.82■■■□□ 2.2
SNCB-202ENST00000393693 ADGRL2O95490 1459 aa28.81■■■□□ 2.2
SNCB-202ENST00000393693 KCNA6P17658 529 aa28.78■■■□□ 2.2
SNCB-202ENST00000393693 RBM33Q96EV2 1170 aaKnown RBP28.78■■■□□ 2.2
SNCB-202ENST00000393693 TMEM94Q12767 1356 aa28.77■■■□□ 2.2
SNCB-202ENST00000393693 KDM5AP29375 1690 aaKnown RBP28.77■■■□□ 2.2
SNCB-202ENST00000393693 TET3O43151 1660 aa28.77■■■□□ 2.2
SNCB-202ENST00000393693 ANKRD50Q9ULJ7 1429 aa28.76■■■□□ 2.19
SNCB-202ENST00000393693 SLC52A1Q9NWF4 448 aa28.75■■■□□ 2.19
SNCB-202ENST00000393693 ADGRB3O60242 1522 aa28.74■■■□□ 2.19
SNCB-202ENST00000393693 PROSER2Q86WR7 435 aaPredicted RBP28.73■■■□□ 2.19
SNCB-202ENST00000393693 BCANQ96GW7 911 aa28.72■■■□□ 2.19
SNCB-202ENST00000393693 FAM135BQ49AJ0 1406 aa28.69■■■□□ 2.18
SNCB-202ENST00000393693 RPRD2Q5VT52 1461 aaKnown RBP28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms