RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 PRG4Q92954 1404 aaPredicted RBP19.17■□□□□ 0.66
SFXN3-202ENST00000393459 ABCA8O94911 1581 aa19.16■□□□□ 0.66
SFXN3-202ENST00000393459 DHX29Q7Z478 1369 aaKnown RBP19.14■□□□□ 0.66
SFXN3-202ENST00000393459 PTPRGP23470 1445 aa19.12■□□□□ 0.65
SFXN3-202ENST00000393459 ADCY10Q96PN6 1610 aa19.11■□□□□ 0.65
SFXN3-202ENST00000393459 PLEKHD1A6NEE1 506 aa19.1■□□□□ 0.65
SFXN3-202ENST00000393459 RNF123Q5XPI4 1314 aa19.1■□□□□ 0.65
SFXN3-202ENST00000393459 GZF1Q9H116 711 aaPredicted RBP19.09■□□□□ 0.65
SFXN3-202ENST00000393459 SHROOM2Q13796 1616 aa19.08■□□□□ 0.65
SFXN3-202ENST00000393459 ANKRD30BQ9BXX2 1392 aa19.08■□□□□ 0.64
SFXN3-202ENST00000393459 ITSN2Q9NZM3 1697 aa19.08■□□□□ 0.64
SFXN3-202ENST00000393459 ATP10BO94823 1461 aa19.07■□□□□ 0.64
SFXN3-202ENST00000393459 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.06■□□□□ 0.647e-6■□□□□ 10.8
SFXN3-202ENST00000393459 DAPK1P53355 1430 aa19.06■□□□□ 0.64
SFXN3-202ENST00000393459 CCDC146Q8IYE0 955 aa19.06■□□□□ 0.64
SFXN3-202ENST00000393459 POGKQ9P215 609 aa19.06■□□□□ 0.64
SFXN3-202ENST00000393459 CFDP1Q9UEE9 299 aaPredicted RBP19.06■□□□□ 0.64
SFXN3-202ENST00000393459 ROCK1Q13464 1354 aa19.05■□□□□ 0.64
SFXN3-202ENST00000393459 DNMT1P26358 1616 aaKnown RBP19.05■□□□□ 0.64
SFXN3-202ENST00000393459 USP35Q9P2H5 1018 aa19.04■□□□□ 0.64
SFXN3-202ENST00000393459 GPATCH8Q9UKJ3 1502 aaKnown RBP19.04■□□□□ 0.64
SFXN3-202ENST00000393459 KIF14Q15058 1648 aa19.03■□□□□ 0.64
SFXN3-202ENST00000393459 DDRGK1Q96HY6 314 aa19.03■□□□□ 0.64
SFXN3-202ENST00000393459 MYBBP1AQ9BQG0 1328 aaKnown RBP19.03■□□□□ 0.64
SFXN3-202ENST00000393459 ABCC5O15440 1437 aa19.02■□□□□ 0.64
SFXN3-202ENST00000393459 NBPF1Q3BBV0 1214 aa19.02■□□□□ 0.64
SFXN3-202ENST00000393459 WASHC2CQ9Y4E1 1318 aa19.02■□□□□ 0.64
SFXN3-202ENST00000393459 CAMSAP2Q08AD1 1489 aa19.01■□□□□ 0.63
SFXN3-202ENST00000393459 SPATA31E1Q6ZUB1 1445 aa18.99■□□□□ 0.63
SFXN3-202ENST00000393459 NEUROD2Q15784 382 aa18.99■□□□□ 0.63
SFXN3-202ENST00000393459 ADAMTS8Q9UP79 889 aa18.98■□□□□ 0.63
SFXN3-202ENST00000393459 ABCC10Q5T3U5 1492 aa18.97■□□□□ 0.63
SFXN3-202ENST00000393459 NLRP13Q86W25 1043 aa18.96■□□□□ 0.63
SFXN3-202ENST00000393459 RPRD2Q5VT52 1461 aaKnown RBP18.96■□□□□ 0.63
SFXN3-202ENST00000393459 CLASP1Q7Z460 1538 aa18.96■□□□□ 0.63
SFXN3-202ENST00000393459 PANK3Q9H999 370 aa18.96■□□□□ 0.63
SFXN3-202ENST00000393459 KIF15Q9NS87 1388 aa18.95■□□□□ 0.62
SFXN3-202ENST00000393459 MS4A1P11836 297 aa18.95■□□□□ 0.62
SFXN3-202ENST00000393459 SEC24BO95487 1268 aa18.94■□□□□ 0.62
SFXN3-202ENST00000393459 BCAR3O75815 825 aa18.93■□□□□ 0.62
SFXN3-202ENST00000393459 UBE2Q2Q8WVN8 375 aa18.93■□□□□ 0.62
SFXN3-202ENST00000393459 NAP1L5Q96NT1 182 aaPredicted RBP18.93■□□□□ 0.62
SFXN3-202ENST00000393459 TEX14Q8IWB6 1497 aa18.92■□□□□ 0.62
SFXN3-202ENST00000393459 ROCK2O75116 1388 aaKnown RBP18.92■□□□□ 0.62
SFXN3-202ENST00000393459 CANXP27824 592 aaKnown RBP18.92■□□□□ 0.62
SFXN3-202ENST00000393459 CDC42BPAQ5VT25 1732 aa18.92■□□□□ 0.62
SFXN3-202ENST00000393459 ABCC2Q92887 1545 aa18.92■□□□□ 0.62
SFXN3-202ENST00000393459 NUP155O75694 1391 aa18.92■□□□□ 0.62
SFXN3-202ENST00000393459 C8orf34Q49A92 452 aa18.92■□□□□ 0.62
SFXN3-202ENST00000393459 SENP3Q9H4L4 574 aaPredicted RBP18.92■□□□□ 0.62
SFXN3-202ENST00000393459 BCORL1Q5H9F3 1711 aa18.92■□□□□ 0.62
SFXN3-202ENST00000393459 FAM161AQ3B820 660 aa18.91■□□□□ 0.62
SFXN3-202ENST00000393459 KTN1Q86UP2 1357 aaKnown RBP18.9■□□□□ 0.62
SFXN3-202ENST00000393459 ERCC6L2Q5T890 1561 aa18.9■□□□□ 0.62
SFXN3-202ENST00000393459 RALBP1Q15311 655 aa18.9■□□□□ 0.62
SFXN3-202ENST00000393459 BCL2L13Q9BXK5 485 aa18.9■□□□□ 0.62
SFXN3-202ENST00000393459 ADGRL2O95490 1459 aa18.9■□□□□ 0.62
SFXN3-202ENST00000393459 WDR43Q15061 677 aaKnown RBP eCLIP18.89■□□□□ 0.62
SFXN3-202ENST00000393459 TNNT2P45379 298 aaPredicted RBP18.89■□□□□ 0.61
SFXN3-202ENST00000393459 ADGBQ8N7X0 1667 aa18.89■□□□□ 0.61
SFXN3-202ENST00000393459 RRAGDQ9NQL2 400 aaPredicted RBP18.88■□□□□ 0.61
SFXN3-202ENST00000393459 CROCC2H7BZ55 1655 aa18.88■□□□□ 0.61
SFXN3-202ENST00000393459 ANKRD30AQ9BXX3 1397 aa18.87■□□□□ 0.61
SFXN3-202ENST00000393459 SHANK2Q9UPX8 1470 aa18.86■□□□□ 0.61
SFXN3-202ENST00000393459 CLUAP1Q96AJ1 413 aa18.86■□□□□ 0.61
SFXN3-202ENST00000393459 PANK2Q9BZ23 570 aa18.85■□□□□ 0.61
SFXN3-202ENST00000393459 VSIG10Q8N0Z9 540 aa18.85■□□□□ 0.61
SFXN3-202ENST00000393459 SPINK5Q9NQ38 1064 aaPredicted RBP18.85■□□□□ 0.61
SFXN3-202ENST00000393459 COG6Q9Y2V7 657 aa18.85■□□□□ 0.61
SFXN3-202ENST00000393459 BRD4O60885 1362 aaPredicted RBP18.85■□□□□ 0.61
SFXN3-202ENST00000393459 UHRF1BP1LA0JNW5 1464 aa18.84■□□□□ 0.61
SFXN3-202ENST00000393459 POLR1AO95602 1720 aaPredicted RBP18.84■□□□□ 0.61
SFXN3-202ENST00000393459 PANK1Q8TE04 598 aa18.84■□□□□ 0.61
SFXN3-202ENST00000393459 IGHDP01880 384 aa18.83■□□□□ 0.61
SFXN3-202ENST00000393459 HNRNPMP52272 730 aaKnown RBP eCLIP18.83■□□□□ 0.61
SFXN3-202ENST00000393459 TSPY4P0CV99 314 aa18.82■□□□□ 0.6
SFXN3-202ENST00000393459 TSPY10P0CW01 314 aa18.82■□□□□ 0.6
SFXN3-202ENST00000393459 RRP7AQ9Y3A4 280 aaKnown RBP18.82■□□□□ 0.6
SFXN3-202ENST00000393459 LRPPRCP42704 1394 aaKnown RBP18.82■□□□□ 0.6
SFXN3-202ENST00000393459 PREX2Q70Z35 1606 aa18.82■□□□□ 0.6
SFXN3-202ENST00000393459 RSPH4AQ5TD94 716 aa18.81■□□□□ 0.6
SFXN3-202ENST00000393459 ARHGEF5Q12774 1597 aa18.81■□□□□ 0.6
SFXN3-202ENST00000393459 APAF1O14727 1248 aa18.81■□□□□ 0.6
SFXN3-202ENST00000393459 CENPQQ7L2Z9 268 aaPredicted RBP18.81■□□□□ 0.6
SFXN3-202ENST00000393459 C9orf84Q5VXU9 1444 aa18.81■□□□□ 0.6
SFXN3-202ENST00000393459 ARID3AQ99856 593 aa18.8■□□□□ 0.6
SFXN3-202ENST00000393459 PDE3BQ13370 1112 aa18.78■□□□□ 0.6
SFXN3-202ENST00000393459 TNNQ9UQP3 1299 aa18.78■□□□□ 0.6
SFXN3-202ENST00000393459 DMRT2Q9Y5R5 561 aa18.78■□□□□ 0.6
SFXN3-202ENST00000393459 ANKRD50Q9ULJ7 1429 aa18.78■□□□□ 0.6
SFXN3-202ENST00000393459 CDC42BPBQ9Y5S2 1711 aa18.77■□□□□ 0.6
SFXN3-202ENST00000393459 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.77■□□□□ 0.6
SFXN3-202ENST00000393459 MBD5Q9P267 1494 aa18.77■□□□□ 0.59
SFXN3-202ENST00000393459 GOLGA2Q08379 1002 aa18.76■□□□□ 0.59
SFXN3-202ENST00000393459 PLEKHH1Q9ULM0 1364 aa18.76■□□□□ 0.59
SFXN3-202ENST00000393459 DUSP27Q5VZP5 1158 aa18.76■□□□□ 0.59
SFXN3-202ENST00000393459 FOXD4L1Q9NU39 408 aa18.76■□□□□ 0.59
SFXN3-202ENST00000393459 SAMD9LQ8IVG5 1584 aa18.76■□□□□ 0.59
SFXN3-202ENST00000393459 CCDC141Q6ZP82 1450 aa18.76■□□□□ 0.59
SFXN3-202ENST00000393459 ZCCHC11Q5TAX3 1644 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms