RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 KDM5CP41229 1560 aa12.38□□□□□ -0.43
TDP1-203ENST00000393454 IQGAP3Q86VI3 1631 aa12.38□□□□□ -0.43
TDP1-203ENST00000393454 HECW2Q9P2P5 1572 aa12.37□□□□□ -0.43
TDP1-203ENST00000393454 MLH3Q9UHC1 1453 aa12.37□□□□□ -0.43
TDP1-203ENST00000393454 L3MBTL2Q969R5 705 aa12.36□□□□□ -0.43
TDP1-203ENST00000393454 MAGI2Q86UL8 1455 aa12.35□□□□□ -0.43
TDP1-203ENST00000393454 TEX14Q8IWB6 1497 aa12.35□□□□□ -0.43
TDP1-203ENST00000393454 KANK1Q14678 1352 aa12.35□□□□□ -0.43
TDP1-203ENST00000393454 DIEXFQ68CQ4 756 aaKnown RBP12.35□□□□□ -0.43
TDP1-203ENST00000393454 A2MP01023 1474 aa12.35□□□□□ -0.43
TDP1-203ENST00000393454 KIF13AQ9H1H9 1805 aa12.35□□□□□ -0.43
TDP1-203ENST00000393454 RICTORQ6R327 1708 aa12.34□□□□□ -0.43
TDP1-203ENST00000393454 PPRC1Q5VV67 1664 aaKnown RBP12.34□□□□□ -0.43
TDP1-203ENST00000393454 EIF2AK4Q9P2K8 1649 aaKnown RBP12.34□□□□□ -0.43
TDP1-203ENST00000393454 DEPDC5O75140 1603 aa12.32□□□□□ -0.44
TDP1-203ENST00000393454 ABCA6Q8N139 1617 aa12.32□□□□□ -0.44
TDP1-203ENST00000393454 CCDC144AA2RUR9 1427 aa12.3□□□□□ -0.44
TDP1-203ENST00000393454 GGT6Q6P531 493 aa12.3□□□□□ -0.44
TDP1-203ENST00000393454 FRMPD1Q5SYB0 1578 aa12.29□□□□□ -0.44
TDP1-203ENST00000393454 DIP2CQ9Y2E4 1556 aa12.29□□□□□ -0.44
TDP1-203ENST00000393454 E9PCH4 1651 aa12.28□□□□□ -0.44
TDP1-203ENST00000393454 YEATS2Q9ULM3 1422 aa12.28□□□□□ -0.44
TDP1-203ENST00000393454 PRDM15P57071 1507 aaPredicted RBP12.28□□□□□ -0.44
TDP1-203ENST00000393454 TET3O43151 1660 aa12.28□□□□□ -0.44
TDP1-203ENST00000393454 ZNF326Q5BKZ1 582 aaKnown RBP12.28□□□□□ -0.44
TDP1-203ENST00000393454 PLA2R1Q13018 1463 aa12.27□□□□□ -0.44
TDP1-203ENST00000393454 MROH1Q8NDA8 1641 aa12.27□□□□□ -0.44
TDP1-203ENST00000393454 HIRIP3Q9BW71 556 aaPredicted RBP12.27□□□□□ -0.45
TDP1-203ENST00000393454 VWDEQ8N2E2 1590 aa12.27□□□□□ -0.45
TDP1-203ENST00000393454 RNF17Q9BXT8 1623 aaKnown RBP12.27□□□□□ -0.45
TDP1-203ENST00000393454 NBPF8Q3BBV2 869 aa12.26□□□□□ -0.45
TDP1-203ENST00000393454 RGL3Q3MIN7 710 aa12.26□□□□□ -0.45
TDP1-203ENST00000393454 KDM2AQ9Y2K7 1162 aa12.26□□□□□ -0.45
TDP1-203ENST00000393454 ZMYM4Q5VZL5 1548 aa12.26□□□□□ -0.45
TDP1-203ENST00000393454 CEP152O94986 1710 aa12.25□□□□□ -0.45
TDP1-203ENST00000393454 TRHP20396 242 aaPredicted RBP12.25□□□□□ -0.45
TDP1-203ENST00000393454 DCAF11Q8TEB1 546 aa12.25□□□□□ -0.45
TDP1-203ENST00000393454 ATP10AO60312 1499 aa12.24□□□□□ -0.45
TDP1-203ENST00000393454 WASHC2CQ9Y4E1 1318 aa12.24□□□□□ -0.45
TDP1-203ENST00000393454 SPHKAPQ2M3C7 1700 aa12.24□□□□□ -0.45
TDP1-203ENST00000393454 BCORL1Q5H9F3 1711 aa12.24□□□□□ -0.45
TDP1-203ENST00000393454 EFCAB6Q5THR3 1501 aa12.22□□□□□ -0.45
TDP1-203ENST00000393454 COL17A1Q9UMD9 1497 aaPredicted RBP12.22□□□□□ -0.45
TDP1-203ENST00000393454 TRPM2O94759 1503 aa12.21□□□□□ -0.45
TDP1-203ENST00000393454 LMTK2Q8IWU2 1503 aa12.21□□□□□ -0.45
TDP1-203ENST00000393454 EIF4G2P78344 907 aaKnown RBP eCLIP12.21□□□□□ -0.45
TDP1-203ENST00000393454 PTPRTO14522 1441 aa12.21□□□□□ -0.46
TDP1-203ENST00000393454 HSPA5P11021 654 aaKnown RBP12.2□□□□□ -0.46
TDP1-203ENST00000393454 CFAP65Q6ZU64 1925 aaKnown RBP12.2□□□□□ -0.46
TDP1-203ENST00000393454 ABCC3O15438 1527 aa12.19□□□□□ -0.46
TDP1-203ENST00000393454 UHRF1BP1Q6BDS2 1440 aa12.18□□□□□ -0.46
TDP1-203ENST00000393454 CLTCL1P53675 1640 aa12.18□□□□□ -0.46
TDP1-203ENST00000393454 CAMSAP1Q5T5Y3 1602 aa12.17□□□□□ -0.46
TDP1-203ENST00000393454 NPATQ14207 1427 aa12.16□□□□□ -0.46
TDP1-203ENST00000393454 DDX10Q13206 875 aaKnown RBP12.16□□□□□ -0.46
TDP1-203ENST00000393454 MLECQ14165 292 aa12.16□□□□□ -0.46
TDP1-203ENST00000393454 SPATA31E1Q6ZUB1 1445 aa12.16□□□□□ -0.46
TDP1-203ENST00000393454 ARHGEF40Q8TER5 1519 aa12.15□□□□□ -0.46
TDP1-203ENST00000393454 UGGT1Q9NYU2 1555 aa12.15□□□□□ -0.46
TDP1-203ENST00000393454 REREQ9P2R6 1566 aa12.15□□□□□ -0.46
TDP1-203ENST00000393454 ZC3H13Q5T200 1668 aaKnown RBP12.15□□□□□ -0.46
TDP1-203ENST00000393454 CHGAP10645 457 aaKnown RBP12.15□□□□□ -0.46
TDP1-203ENST00000393454 CARD11Q9BXL7 1154 aa12.15□□□□□ -0.46
TDP1-203ENST00000393454 RALGAPBQ86X10 1494 aa12.14□□□□□ -0.47
TDP1-203ENST00000393454 MIER1Q8N108 512 aa12.14□□□□□ -0.47
TDP1-203ENST00000393454 KIF1BO60333 1816 aa12.14□□□□□ -0.47
TDP1-203ENST00000393454 PRAG1Q86YV5 1406 aa12.14□□□□□ -0.47
TDP1-203ENST00000393454 AGLP35573 1532 aa12.13□□□□□ -0.47
TDP1-203ENST00000393454 ARID4BQ4LE39 1312 aaPredicted RBP12.13□□□□□ -0.47
TDP1-203ENST00000393454 ROCK2O75116 1388 aaKnown RBP12.12□□□□□ -0.47
TDP1-203ENST00000393454 CNTLNQ9NXG0 1405 aa12.12□□□□□ -0.47
TDP1-203ENST00000393454 USP47Q96K76 1375 aa12.12□□□□□ -0.47
TDP1-203ENST00000393454 SIGLEC1Q9BZZ2 1709 aa12.12□□□□□ -0.47
TDP1-203ENST00000393454 PPP6R1Q9UPN7 881 aa12.11□□□□□ -0.47
TDP1-203ENST00000393454 ARHGAP31Q2M1Z3 1444 aa12.11□□□□□ -0.47
TDP1-203ENST00000393454 TRPM1Q7Z4N2 1603 aa12.11□□□□□ -0.47
TDP1-203ENST00000393454 ESF1Q9H501 851 aaKnown RBP12.1□□□□□ -0.47
TDP1-203ENST00000393454 NBPF1Q3BBV0 1214 aa12.09□□□□□ -0.47
TDP1-203ENST00000393454 STAC3Q96MF2 364 aa12.09□□□□□ -0.47
TDP1-203ENST00000393454 CLTCQ00610 1675 aaKnown RBP12.09□□□□□ -0.47
TDP1-203ENST00000393454 NOS1P29475 1434 aa12.09□□□□□ -0.47
TDP1-203ENST00000393454 MROH2AA6NES4 1674 aa12.08□□□□□ -0.48
TDP1-203ENST00000393454 WASHC2AQ641Q2 1341 aa12.08□□□□□ -0.48
TDP1-203ENST00000393454 NEURL4Q96JN8 1562 aa12.08□□□□□ -0.48
TDP1-203ENST00000393454 SYNMO15061 1565 aa12.07□□□□□ -0.48
TDP1-203ENST00000393454 FBXO31Q5XUX0 539 aaPredicted RBP12.07□□□□□ -0.48
TDP1-203ENST00000393454 MADDQ8WXG6 1647 aa12.07□□□□□ -0.48
TDP1-203ENST00000393454 PREX1Q8TCU6 1659 aa12.07□□□□□ -0.48
TDP1-203ENST00000393454 C11orf95C9JLR9 678 aaPredicted RBP12.06□□□□□ -0.48
TDP1-203ENST00000393454 ADGRB3O60242 1522 aa12.06□□□□□ -0.48
TDP1-203ENST00000393454 IDI1Q13907 227 aa12.06□□□□□ -0.48
TDP1-203ENST00000393454 SLC52A1Q9NWF4 448 aa12.06□□□□□ -0.48
TDP1-203ENST00000393454 CCDC7Q96M83 1385 aa12.05□□□□□ -0.48
TDP1-203ENST00000393454 ST20-MTHFSA0A0A6YYL1 179 aa12.05□□□□□ -0.48
TDP1-203ENST00000393454 POLR3GLQ9BT43 218 aa12.05□□□□□ -0.48
TDP1-203ENST00000393454 PIK3C2BO00750 1634 aa12.04□□□□□ -0.48
TDP1-203ENST00000393454 GPRASP1Q5JY77 1395 aa12.04□□□□□ -0.48
TDP1-203ENST00000393454 ADGRF5Q8IZF2 1346 aa12.04□□□□□ -0.48
TDP1-203ENST00000393454 IFT172Q9UG01 1749 aa12.04□□□□□ -0.48
TDP1-203ENST00000393454 KIF7Q2M1P5 1343 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms