RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 DUOX2Q9NRD8 1548 aa28.35■■■□□ 2.13
CSNK1D-203ENST00000392334 NUP155O75694 1391 aa28.34■■■□□ 2.13
CSNK1D-203ENST00000392334 PZPP20742 1482 aa28.32■■■□□ 2.12
CSNK1D-203ENST00000392334 ABCA6Q8N139 1617 aa28.31■■■□□ 2.12
CSNK1D-203ENST00000392334 YEATS2Q9ULM3 1422 aa28.3■■■□□ 2.12
CSNK1D-203ENST00000392334 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.3■■■□□ 2.125e-7■□□□□ 9.7
CSNK1D-203ENST00000392334 MYT1Q01538 1121 aa28.28■■■□□ 2.12
CSNK1D-203ENST00000392334 PKD2Q13563 968 aa28.28■■■□□ 2.12
CSNK1D-203ENST00000392334 ERBINQ96RT1 1412 aa28.27■■■□□ 2.12
CSNK1D-203ENST00000392334 ZMYM4Q5VZL5 1548 aa28.27■■■□□ 2.12
CSNK1D-203ENST00000392334 DHX29Q7Z478 1369 aaKnown RBP28.26■■■□□ 2.11
CSNK1D-203ENST00000392334 DIP2CQ9Y2E4 1556 aa28.25■■■□□ 2.11
CSNK1D-203ENST00000392334 TONSLQ96HA7 1378 aa28.25■■■□□ 2.11
CSNK1D-203ENST00000392334 A2MP01023 1474 aa28.24■■■□□ 2.11
CSNK1D-203ENST00000392334 ANKRD30BQ9BXX2 1392 aa28.22■■■□□ 2.11
CSNK1D-203ENST00000392334 KIF3BO15066 747 aa28.21■■■□□ 2.11
CSNK1D-203ENST00000392334 TIMELESSQ9UNS1 1208 aa28.19■■■□□ 2.1
CSNK1D-203ENST00000392334 MAGI2Q86UL8 1455 aa28.18■■■□□ 2.1
CSNK1D-203ENST00000392334 UNC13BO14795 1591 aa28.17■■■□□ 2.1
CSNK1D-203ENST00000392334 PPP1R15AO75807 674 aaPredicted RBP28.16■■■□□ 2.1
CSNK1D-203ENST00000392334 EIF2AK4Q9P2K8 1649 aaKnown RBP28.13■■■□□ 2.09
CSNK1D-203ENST00000392334 KDM5DQ9BY66 1539 aa28.12■■■□□ 2.09
CSNK1D-203ENST00000392334 FAM135AQ9P2D6 1515 aa28.12■■■□□ 2.09
CSNK1D-203ENST00000392334 ATP10AO60312 1499 aa28.11■■■□□ 2.09
CSNK1D-203ENST00000392334 DEPDC5O75140 1603 aa28.1■■■□□ 2.09
CSNK1D-203ENST00000392334 GGT6Q6P531 493 aa28.08■■■□□ 2.09
CSNK1D-203ENST00000392334 ARHGEF40Q8TER5 1519 aa28.08■■■□□ 2.09
CSNK1D-203ENST00000392334 MROH1Q8NDA8 1641 aa28.08■■■□□ 2.08
CSNK1D-203ENST00000392334 SIGLEC1Q9BZZ2 1709 aa28.07■■■□□ 2.08
CSNK1D-203ENST00000392334 L3MBTL2Q969R5 705 aa28.07■■■□□ 2.08
CSNK1D-203ENST00000392334 IQGAP3Q86VI3 1631 aa28.06■■■□□ 2.08
CSNK1D-203ENST00000392334 RPRD2Q5VT52 1461 aaKnown RBP28.05■■■□□ 2.08
CSNK1D-203ENST00000392334 SUPT16HQ9Y5B9 1047 aaKnown RBP28.05■■■□□ 2.08
CSNK1D-203ENST00000392334 PRDM15P57071 1507 aaPredicted RBP28.03■■■□□ 2.08
CSNK1D-203ENST00000392334 RNF17Q9BXT8 1623 aaKnown RBP28.03■■■□□ 2.08
CSNK1D-203ENST00000392334 BCORL1Q5H9F3 1711 aa28.03■■■□□ 2.08
CSNK1D-203ENST00000392334 REREQ9P2R6 1566 aa27.99■■■□□ 2.07
CSNK1D-203ENST00000392334 VWDEQ8N2E2 1590 aa27.98■■■□□ 2.07
CSNK1D-203ENST00000392334 KANK1Q14678 1352 aa27.98■■■□□ 2.07
CSNK1D-203ENST00000392334 CEP152O94986 1710 aa27.95■■■□□ 2.06
CSNK1D-203ENST00000392334 HIRIP3Q9BW71 556 aaPredicted RBP27.95■■■□□ 2.06
CSNK1D-203ENST00000392334 MLECQ14165 292 aa27.94■■■□□ 2.06
CSNK1D-203ENST00000392334 AGLP35573 1532 aa27.93■■■□□ 2.06
CSNK1D-203ENST00000392334 WASHC2CQ9Y4E1 1318 aa27.92■■■□□ 2.06
CSNK1D-203ENST00000392334 E9PCH4 1651 aa27.91■■■□□ 2.06
CSNK1D-203ENST00000392334 ARID4BQ4LE39 1312 aaPredicted RBP27.9■■■□□ 2.06
CSNK1D-203ENST00000392334 TET3O43151 1660 aa27.9■■■□□ 2.06
CSNK1D-203ENST00000392334 PLA2R1Q13018 1463 aa27.89■■■□□ 2.05
CSNK1D-203ENST00000392334 ABCC3O15438 1527 aa27.87■■■□□ 2.05
CSNK1D-203ENST00000392334 NBPF8Q3BBV2 869 aa27.87■■■□□ 2.05
CSNK1D-203ENST00000392334 ZNF326Q5BKZ1 582 aaKnown RBP27.86■■■□□ 2.05
CSNK1D-203ENST00000392334 CCDC144AA2RUR9 1427 aa27.86■■■□□ 2.05
CSNK1D-203ENST00000392334 LMTK2Q8IWU2 1503 aa27.84■■■□□ 2.05
CSNK1D-203ENST00000392334 CFAP65Q6ZU64 1925 aaKnown RBP27.84■■■□□ 2.05
CSNK1D-203ENST00000392334 EFCAB6Q5THR3 1501 aa27.84■■■□□ 2.05
CSNK1D-203ENST00000392334 RGL3Q3MIN7 710 aa27.84■■■□□ 2.05
CSNK1D-203ENST00000392334 KDM2AQ9Y2K7 1162 aa27.82■■■□□ 2.04
CSNK1D-203ENST00000392334 CAMSAP1Q5T5Y3 1602 aa27.8■■■□□ 2.04
CSNK1D-203ENST00000392334 DDX10Q13206 875 aaKnown RBP27.8■■■□□ 2.04
CSNK1D-203ENST00000392334 DCAF11Q8TEB1 546 aa27.79■■■□□ 2.04
CSNK1D-203ENST00000392334 NPATQ14207 1427 aa27.78■■■□□ 2.04
CSNK1D-203ENST00000392334 ZC3H13Q5T200 1668 aaKnown RBP27.78■■■□□ 2.04
CSNK1D-203ENST00000392334 CCER2I3L3R5 266 aa27.77■■■□□ 2.04
CSNK1D-203ENST00000392334 CLTCQ00610 1675 aaKnown RBP27.76■■■□□ 2.03
CSNK1D-203ENST00000392334 SPHKAPQ2M3C7 1700 aa27.76■■■□□ 2.03
CSNK1D-203ENST00000392334 PTPRTO14522 1441 aa27.72■■■□□ 2.03
CSNK1D-203ENST00000392334 PPP6R1Q9UPN7 881 aa27.72■■■□□ 2.03
CSNK1D-203ENST00000392334 TRPM2O94759 1503 aa27.69■■■□□ 2.02
CSNK1D-203ENST00000392334 UGGT1Q9NYU2 1555 aa27.69■■■□□ 2.02
CSNK1D-203ENST00000392334 ESF1Q9H501 851 aaKnown RBP27.68■■■□□ 2.02
CSNK1D-203ENST00000392334 HSPA5P11021 654 aaKnown RBP27.67■■■□□ 2.02
CSNK1D-203ENST00000392334 ARHGAP31Q2M1Z3 1444 aa27.67■■■□□ 2.02
CSNK1D-203ENST00000392334 FBXO31Q5XUX0 539 aaPredicted RBP27.67■■■□□ 2.02
CSNK1D-203ENST00000392334 CLTCL1P53675 1640 aa27.66■■■□□ 2.02
CSNK1D-203ENST00000392334 EIF4G2P78344 907 aaKnown RBP eCLIP27.63■■■□□ 2.01
CSNK1D-203ENST00000392334 ANP32CO43423 234 aa27.62■■■□□ 2.01
CSNK1D-203ENST00000392334 TSHZ2Q9NRE2 1034 aa27.62■■■□□ 2.01
CSNK1D-203ENST00000392334 ZMYM3Q14202 1370 aa27.62■■■□□ 2.01
CSNK1D-203ENST00000392334 NOS1P29475 1434 aa27.61■■■□□ 2.01
CSNK1D-203ENST00000392334 PREX1Q8TCU6 1659 aa27.61■■■□□ 2.01
CSNK1D-203ENST00000392334 SYNMO15061 1565 aa27.6■■■□□ 2.01
CSNK1D-203ENST00000392334 FER1L4A9Z1Z3 1794 aa27.58■■■□□ 2.01
CSNK1D-203ENST00000392334 CNTLNQ9NXG0 1405 aa27.58■■■□□ 2.01
CSNK1D-203ENST00000392334 UHRF1BP1Q6BDS2 1440 aa27.58■■■□□ 2.01
CSNK1D-203ENST00000392334 SPATA31E1Q6ZUB1 1445 aa27.56■■■□□ 2
CSNK1D-203ENST00000392334 CEBPAP49715 358 aaPredicted RBP27.55■■■□□ 2
CSNK1D-203ENST00000392334 ERVK-7P63135 1459 aa27.55■■■□□ 2
CSNK1D-203ENST00000392334 CHGAP10645 457 aaKnown RBP27.54■■■□□ 2
CSNK1D-203ENST00000392334 PLPPR3Q6T4P5 718 aa27.54■■■□□ 2
CSNK1D-203ENST00000392334 CARD11Q9BXL7 1154 aa27.53■■■□□ 2
CSNK1D-203ENST00000392334 MADDQ8WXG6 1647 aa27.52■■■□□ 2
CSNK1D-203ENST00000392334 IDI1Q13907 227 aa27.51■■■□□ 2
CSNK1D-203ENST00000392334 KIF1BO60333 1816 aa27.51■■■□□ 2
CSNK1D-203ENST00000392334 MROH2AA6NES4 1674 aa27.51■■□□□ 1.99
CSNK1D-203ENST00000392334 PRAG1Q86YV5 1406 aa27.51■■□□□ 1.99
CSNK1D-203ENST00000392334 PIK3C2BO00750 1634 aa27.5■■□□□ 1.99
CSNK1D-203ENST00000392334 NBPF1Q3BBV0 1214 aa27.5■■□□□ 1.99
CSNK1D-203ENST00000392334 SPATA31D1Q6ZQQ2 1576 aa27.49■■□□□ 1.99
CSNK1D-203ENST00000392334 C3P01024 1663 aa27.48■■□□□ 1.99
CSNK1D-203ENST00000392334 RALGAPBQ86X10 1494 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 201.3 ms