RNA–Protein interactions for RNA: ENST00000392008.6

COPS8-202, Transcript of COP9 signalosome subunit 8, humanhuman

TSL 2 BASIC

Gene COPS8, Length 1,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS8-202ENST00000392008 NCOA1Q15788 1441 aa26.36■■□□□ 1.81
COPS8-202ENST00000392008 LMTK3Q96Q04 1460 aa26.34■■□□□ 1.81
COPS8-202ENST00000392008 WASHC2CQ9Y4E1 1318 aa26.33■■□□□ 1.81
COPS8-202ENST00000392008 MROH2AA6NES4 1674 aa26.32■■□□□ 1.8
COPS8-202ENST00000392008 ADGRL2O95490 1459 aa26.32■■□□□ 1.8
COPS8-202ENST00000392008 EIF2AK4Q9P2K8 1649 aaKnown RBP26.31■■□□□ 1.8
COPS8-202ENST00000392008 ERBINQ96RT1 1412 aa26.31■■□□□ 1.8
COPS8-202ENST00000392008 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.3■■□□□ 1.8
COPS8-202ENST00000392008 RRBP1Q9P2E9 1410 aaKnown RBP26.3■■□□□ 1.8
COPS8-202ENST00000392008 HSPA2P54652 639 aa26.29■■□□□ 1.8
COPS8-202ENST00000392008 RNF17Q9BXT8 1623 aaKnown RBP26.29■■□□□ 1.8
COPS8-202ENST00000392008 KDM5DQ9BY66 1539 aa26.28■■□□□ 1.8
COPS8-202ENST00000392008 MROH1Q8NDA8 1641 aa26.25■■□□□ 1.79
COPS8-202ENST00000392008 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.25■■□□□ 1.79
COPS8-202ENST00000392008 PREX1Q8TCU6 1659 aa26.24■■□□□ 1.79
COPS8-202ENST00000392008 UHRF1BP1Q6BDS2 1440 aa26.23■■□□□ 1.79
COPS8-202ENST00000392008 FAM135AQ9P2D6 1515 aa26.23■■□□□ 1.79
COPS8-202ENST00000392008 FBXO31Q5XUX0 539 aaPredicted RBP26.22■■□□□ 1.79
COPS8-202ENST00000392008 NPATQ14207 1427 aa26.22■■□□□ 1.79
COPS8-202ENST00000392008 ABCC3O15438 1527 aa26.21■■□□□ 1.79
COPS8-202ENST00000392008 SETD1BQ9UPS6 1966 aaKnown RBP26.21■■□□□ 1.79
COPS8-202ENST00000392008 ANKRD50Q9ULJ7 1429 aa26.21■■□□□ 1.79
COPS8-202ENST00000392008 ROCK1Q13464 1354 aa26.2■■□□□ 1.78
COPS8-202ENST00000392008 PRDM15P57071 1507 aaPredicted RBP26.18■■□□□ 1.78
COPS8-202ENST00000392008 PZPP20742 1482 aa26.17■■□□□ 1.78
COPS8-202ENST00000392008 DEPDC5O75140 1603 aa26.16■■□□□ 1.78
COPS8-202ENST00000392008 CEP152O94986 1710 aa26.16■■□□□ 1.78
COPS8-202ENST00000392008 ZC3H13Q5T200 1668 aaKnown RBP26.15■■□□□ 1.78
COPS8-202ENST00000392008 KANK1Q14678 1352 aa26.14■■□□□ 1.77
COPS8-202ENST00000392008 TNRQ92752 1358 aa26.1■■□□□ 1.77
COPS8-202ENST00000392008 CAMSAP1Q5T5Y3 1602 aa26.1■■□□□ 1.77
COPS8-202ENST00000392008 MYO3AQ8NEV4 1616 aa26.09■■□□□ 1.77
COPS8-202ENST00000392008 VWDEQ8N2E2 1590 aa26.07■■□□□ 1.76
COPS8-202ENST00000392008 CEP170BQ9Y4F5 1589 aaPredicted RBP26.04■■□□□ 1.76
COPS8-202ENST00000392008 ERVK-7P63135 1459 aa26.04■■□□□ 1.76
COPS8-202ENST00000392008 ARHGAP31Q2M1Z3 1444 aa26.03■■□□□ 1.76
COPS8-202ENST00000392008 LMTK2Q8IWU2 1503 aa26.03■■□□□ 1.76
COPS8-202ENST00000392008 SPATA31D1Q6ZQQ2 1576 aa26.02■■□□□ 1.76
COPS8-202ENST00000392008 CFAP65Q6ZU64 1925 aaKnown RBP26.01■■□□□ 1.75
COPS8-202ENST00000392008 ZNF142P52746 1687 aaPredicted RBP26■■□□□ 1.75
COPS8-202ENST00000392008 A2ML1A8K2U0 1454 aa26■■□□□ 1.75
COPS8-202ENST00000392008 UNC13BO14795 1591 aa26■■□□□ 1.75
COPS8-202ENST00000392008 NAIPQ13075 1403 aa26■■□□□ 1.75
COPS8-202ENST00000392008 STRCQ7RTU9 1775 aa25.97■■□□□ 1.75
COPS8-202ENST00000392008 NUP155O75694 1391 aa25.97■■□□□ 1.75
COPS8-202ENST00000392008 NLRP1Q9C000 1473 aa25.96■■□□□ 1.75
COPS8-202ENST00000392008 EFCAB6Q5THR3 1501 aa25.96■■□□□ 1.75
COPS8-202ENST00000392008 NCKAP5LQ9HCH0 1330 aa25.94■■□□□ 1.74
COPS8-202ENST00000392008 HFM1A2PYH4 1435 aa25.94■■□□□ 1.74
COPS8-202ENST00000392008 GCC2Q8IWJ2 1684 aa25.92■■□□□ 1.74
COPS8-202ENST00000392008 UGGT1Q9NYU2 1555 aa25.91■■□□□ 1.74
COPS8-202ENST00000392008 TET3O43151 1660 aa25.9■■□□□ 1.74
COPS8-202ENST00000392008 IQGAP3Q86VI3 1631 aa25.9■■□□□ 1.74
COPS8-202ENST00000392008 DMRT2Q9Y5R5 561 aa25.9■■□□□ 1.74
COPS8-202ENST00000392008 THEMISQ8N1K5 641 aaPredicted RBP25.89■■□□□ 1.73
COPS8-202ENST00000392008 PLA2R1Q13018 1463 aa25.89■■□□□ 1.73
COPS8-202ENST00000392008 NOS1P29475 1434 aa25.87■■□□□ 1.73
COPS8-202ENST00000392008 RPRD2Q5VT52 1461 aaKnown RBP25.87■■□□□ 1.73
COPS8-202ENST00000392008 IDI1Q13907 227 aa25.86■■□□□ 1.73
COPS8-202ENST00000392008 SYNMO15061 1565 aa25.86■■□□□ 1.73
COPS8-202ENST00000392008 PKD2Q13563 968 aa25.85■■□□□ 1.73
COPS8-202ENST00000392008 TRIM52Q96A61 297 aa25.84■■□□□ 1.73
COPS8-202ENST00000392008 PTPRTO14522 1441 aa25.83■■□□□ 1.73
COPS8-202ENST00000392008 E9PCH4 1651 aa25.83■■□□□ 1.73
COPS8-202ENST00000392008 STAG3Q9UJ98 1225 aa25.81■■□□□ 1.72
COPS8-202ENST00000392008 ANKLE2Q86XL3 938 aa25.8■■□□□ 1.72
COPS8-202ENST00000392008 PIK3C2BO00750 1634 aa25.8■■□□□ 1.72
COPS8-202ENST00000392008 UBR1Q8IWV7 1749 aa25.8■■□□□ 1.72
COPS8-202ENST00000392008 SLC52A1Q9NWF4 448 aa25.78■■□□□ 1.72
COPS8-202ENST00000392008 NEURL4Q96JN8 1562 aa25.74■■□□□ 1.71
COPS8-202ENST00000392008 POLR1AO95602 1720 aaPredicted RBP25.73■■□□□ 1.71
COPS8-202ENST00000392008 SLC4A1APQ9BWU0 796 aaKnown RBP25.72■■□□□ 1.71
COPS8-202ENST00000392008 SETD5Q9C0A6 1442 aa25.72■■□□□ 1.71
COPS8-202ENST00000392008 LTKP29376 864 aa25.71■■□□□ 1.71
COPS8-202ENST00000392008 TXNDC2Q86VQ3 553 aa25.71■■□□□ 1.71
COPS8-202ENST00000392008 TMEM2Q9UHN6 1383 aa25.7■■□□□ 1.7
COPS8-202ENST00000392008 CHGAP10645 457 aaKnown RBP25.7■■□□□ 1.7
COPS8-202ENST00000392008 ARHGAP23Q9P227 1491 aa25.69■■□□□ 1.7
COPS8-202ENST00000392008 ADGRB3O60242 1522 aa25.69■■□□□ 1.7
COPS8-202ENST00000392008 SLIT1O75093 1534 aa25.69■■□□□ 1.7
COPS8-202ENST00000392008 NPHP4O75161 1426 aaPredicted RBP25.68■■□□□ 1.7
COPS8-202ENST00000392008 ZNF335Q9H4Z2 1342 aaPredicted RBP25.67■■□□□ 1.7
COPS8-202ENST00000392008 MED14O60244 1454 aa25.67■■□□□ 1.7
COPS8-202ENST00000392008 SCAF11Q99590 1463 aaKnown RBP25.67■■□□□ 1.7
COPS8-202ENST00000392008 EID1Q9Y6B2 187 aa25.67■■□□□ 1.7
COPS8-202ENST00000392008 KDM5AP29375 1690 aaKnown RBP25.66■■□□□ 1.7
COPS8-202ENST00000392008 RAB3GAP2Q9H2M9 1393 aa25.65■■□□□ 1.7
COPS8-202ENST00000392008 FOXD1Q16676 465 aa25.64■■□□□ 1.7
COPS8-202ENST00000392008 CERKQ8TCT0 537 aa25.64■■□□□ 1.7
COPS8-202ENST00000392008 SPHKAPQ2M3C7 1700 aa25.64■■□□□ 1.69
COPS8-202ENST00000392008 TMEM131LA2VDJ0 1609 aa25.63■■□□□ 1.69
COPS8-202ENST00000392008 MPHOSPH9Q99550 1183 aa25.62■■□□□ 1.69
COPS8-202ENST00000392008 IQGAP1P46940 1657 aa25.61■■□□□ 1.69
COPS8-202ENST00000392008 LTBP4Q8N2S1 1624 aa25.6■■□□□ 1.69
COPS8-202ENST00000392008 MYO5BQ9ULV0 1848 aa25.6■■□□□ 1.69
COPS8-202ENST00000392008 SENP3Q9H4L4 574 aaPredicted RBP25.59■■□□□ 1.69
COPS8-202ENST00000392008 TRPM2O94759 1503 aa25.58■■□□□ 1.69
COPS8-202ENST00000392008 NUTM2DQ5VT03 806 aaPredicted RBP25.57■■□□□ 1.68
COPS8-202ENST00000392008 RIMS2Q9UQ26 1411 aa25.57■■□□□ 1.68
COPS8-202ENST00000392008 ZFYVE9O95405 1425 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms