RNA–Protein interactions for RNA: ENST00000390735.2

MIR550A3-201, Transcript of microRNA 550a-3, humanhuman

BASIC

Gene MIR550A3, Length 95 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR550A3-201ENST00000390735 TNRQ92752 1358 aa8.58□□□□□ -1.04
MIR550A3-201ENST00000390735 CDC42BPAQ5VT25 1732 aa8.57□□□□□ -1.04
MIR550A3-201ENST00000390735 LRRIQ1Q96JM4 1722 aa8.57□□□□□ -1.04
MIR550A3-201ENST00000390735 HNRNPMP52272 730 aaKnown RBP eCLIP8.56□□□□□ -1.04
MIR550A3-201ENST00000390735 ZNF777Q9ULD5 760 aaPredicted RBP8.56□□□□□ -1.04
MIR550A3-201ENST00000390735 INO80Q9ULG1 1556 aaPredicted RBP8.56□□□□□ -1.04
MIR550A3-201ENST00000390735 FAM135BQ49AJ0 1406 aa8.55□□□□□ -1.04
MIR550A3-201ENST00000390735 SYCP2Q9BX26 1530 aa8.55□□□□□ -1.04
MIR550A3-201ENST00000390735 FAM135AQ9P2D6 1515 aa8.54□□□□□ -1.04
MIR550A3-201ENST00000390735 ADGBQ8N7X0 1667 aa8.54□□□□□ -1.04
MIR550A3-201ENST00000390735 UGGT1Q9NYU2 1555 aa8.54□□□□□ -1.04
MIR550A3-201ENST00000390735 PZPP20742 1482 aa8.54□□□□□ -1.04
MIR550A3-201ENST00000390735 NLRP1Q9C000 1473 aa8.54□□□□□ -1.04
MIR550A3-201ENST00000390735 XIRP1Q702N8 1843 aaKnown RBP8.54□□□□□ -1.04
MIR550A3-201ENST00000390735 SRCAPQ6ZRS2 3230 aa8.53□□□□□ -1.04
MIR550A3-201ENST00000390735 EEA1Q15075 1411 aa8.53□□□□□ -1.04
MIR550A3-201ENST00000390735 MIA2Q96PC5 1412 aa8.53□□□□□ -1.04
MIR550A3-201ENST00000390735 KIAA1107Q9UPP5 1409 aa8.53□□□□□ -1.04
MIR550A3-201ENST00000390735 ZC3H13Q5T200 1668 aaKnown RBP8.52□□□□□ -1.05
MIR550A3-201ENST00000390735 PLEKHH2Q8IVE3 1493 aa8.51□□□□□ -1.05
MIR550A3-201ENST00000390735 ARHGAP35Q9NRY4 1499 aa8.51□□□□□ -1.05
MIR550A3-201ENST00000390735 GPATCH8Q9UKJ3 1502 aaKnown RBP8.5□□□□□ -1.05
MIR550A3-201ENST00000390735 TRIM52Q96A61 297 aa8.5□□□□□ -1.05
MIR550A3-201ENST00000390735 WASHC2CQ9Y4E1 1318 aa8.5□□□□□ -1.05
MIR550A3-201ENST00000390735 ROBO1Q9Y6N7 1651 aa8.49□□□□□ -1.05
MIR550A3-201ENST00000390735 KDM5DQ9BY66 1539 aa8.49□□□□□ -1.05
MIR550A3-201ENST00000390735 CCDC18Q5T9S5 1454 aa8.49□□□□□ -1.05
MIR550A3-201ENST00000390735 DHX29Q7Z478 1369 aaKnown RBP8.48□□□□□ -1.05
MIR550A3-201ENST00000390735 KIF3BO15066 747 aa8.48□□□□□ -1.05
MIR550A3-201ENST00000390735 ZNF772Q68DY9 489 aaPredicted RBP8.48□□□□□ -1.05
MIR550A3-201ENST00000390735 CFDP1Q9UEE9 299 aaPredicted RBP8.48□□□□□ -1.05
MIR550A3-201ENST00000390735 JCADQ9P266 1359 aa8.48□□□□□ -1.05
MIR550A3-201ENST00000390735 RTEL1-TNFRSF6BF6WH68 1400 aa8.46□□□□□ -1.05
MIR550A3-201ENST00000390735 PHLPP1O60346 1717 aa8.46□□□□□ -1.05
MIR550A3-201ENST00000390735 SCAF11Q99590 1463 aaKnown RBP8.46□□□□□ -1.05
MIR550A3-201ENST00000390735 UBTFP17480 764 aaKnown RBP8.46□□□□□ -1.06
MIR550A3-201ENST00000390735 RXRBP28702 533 aa8.46□□□□□ -1.06
MIR550A3-201ENST00000390735 TMEM94Q12767 1356 aa8.46□□□□□ -1.06
MIR550A3-201ENST00000390735 CASKIN1Q8WXD9 1431 aa8.46□□□□□ -1.06
MIR550A3-201ENST00000390735 LRRC9Q6ZRR7 1453 aa8.45□□□□□ -1.06
MIR550A3-201ENST00000390735 TXNDC2Q86VQ3 553 aa8.45□□□□□ -1.06
MIR550A3-201ENST00000390735 UBR1Q8IWV7 1749 aa8.44□□□□□ -1.06
MIR550A3-201ENST00000390735 LTKP29376 864 aa8.44□□□□□ -1.06
MIR550A3-201ENST00000390735 MEX3CQ5U5Q3 659 aaKnown RBP8.44□□□□□ -1.06
MIR550A3-201ENST00000390735 SPATA31A6Q5VVP1 1343 aa8.44□□□□□ -1.06
MIR550A3-201ENST00000390735 CDK12Q9NYV4 1490 aaPredicted RBP8.44□□□□□ -1.06
MIR550A3-201ENST00000390735 MBD5Q9P267 1494 aa8.44□□□□□ -1.06
MIR550A3-201ENST00000390735 LRP6O75581 1613 aa8.43□□□□□ -1.06
MIR550A3-201ENST00000390735 SLAIN2Q9P270 581 aa8.43□□□□□ -1.06
MIR550A3-201ENST00000390735 ZNF644Q9H582 1327 aaPredicted RBP8.43□□□□□ -1.06
MIR550A3-201ENST00000390735 CCNB3Q8WWL7 1395 aa8.43□□□□□ -1.06
MIR550A3-201ENST00000390735 MAP3K1Q13233 1512 aa8.43□□□□□ -1.06
MIR550A3-201ENST00000390735 KCNA6P17658 529 aa8.42□□□□□ -1.06
MIR550A3-201ENST00000390735 PROSER2Q86WR7 435 aaPredicted RBP8.42□□□□□ -1.06
MIR550A3-201ENST00000390735 ARHGAP23Q9P227 1491 aa8.42□□□□□ -1.06
MIR550A3-201ENST00000390735 SLIT1O75093 1534 aa8.42□□□□□ -1.06
MIR550A3-201ENST00000390735 COL16A1Q07092 1604 aaPredicted RBP8.41□□□□□ -1.06
MIR550A3-201ENST00000390735 ERVK-7P63135 1459 aa8.41□□□□□ -1.06
MIR550A3-201ENST00000390735 NCOA2Q15596 1464 aa8.41□□□□□ -1.06
MIR550A3-201ENST00000390735 RBM33Q96EV2 1170 aaKnown RBP8.41□□□□□ -1.06
MIR550A3-201ENST00000390735 EHMT2Q96KQ7 1210 aa8.41□□□□□ -1.06
MIR550A3-201ENST00000390735 EID1Q9Y6B2 187 aa8.41□□□□□ -1.06
MIR550A3-201ENST00000390735 FGD6Q6ZV73 1430 aa8.4□□□□□ -1.06
MIR550A3-201ENST00000390735 CHIC1Q5VXU3 224 aa8.4□□□□□ -1.06
MIR550A3-201ENST00000390735 PRDM15P57071 1507 aaPredicted RBP8.39□□□□□ -1.07
MIR550A3-201ENST00000390735 MSH6P52701 1360 aa8.39□□□□□ -1.07
MIR550A3-201ENST00000390735 CFAP65Q6ZU64 1925 aaKnown RBP8.39□□□□□ -1.07
MIR550A3-201ENST00000390735 FOXD1Q16676 465 aa8.39□□□□□ -1.07
MIR550A3-201ENST00000390735 ZRANB1Q9UGI0 708 aa8.39□□□□□ -1.07
MIR550A3-201ENST00000390735 ABCC3O15438 1527 aa8.39□□□□□ -1.07
MIR550A3-201ENST00000390735 FYCO1Q9BQS8 1478 aa8.38□□□□□ -1.07
MIR550A3-201ENST00000390735 SHPRHQ149N8 1683 aa8.38□□□□□ -1.07
MIR550A3-201ENST00000390735 TIAM1Q13009 1591 aa8.38□□□□□ -1.07
MIR550A3-201ENST00000390735 SLC26A8Q96RN1 970 aa8.37□□□□□ -1.07
MIR550A3-201ENST00000390735 NKTRP30414 1462 aaKnown RBP8.37□□□□□ -1.07
MIR550A3-201ENST00000390735 RGS12O14924 1447 aa8.37□□□□□ -1.07
MIR550A3-201ENST00000390735 TET3O43151 1660 aa8.37□□□□□ -1.07
MIR550A3-201ENST00000390735 TMEM2Q9UHN6 1383 aa8.36□□□□□ -1.07
MIR550A3-201ENST00000390735 SETBP1Q9Y6X0 1596 aa8.36□□□□□ -1.07
MIR550A3-201ENST00000390735 NUTM2BA6NNL0 878 aaPredicted RBP8.36□□□□□ -1.07
MIR550A3-201ENST00000390735 NUTM2EB1AL46 878 aaPredicted RBP8.36□□□□□ -1.07
MIR550A3-201ENST00000390735 RSPH4AQ5TD94 716 aa8.36□□□□□ -1.07
MIR550A3-201ENST00000390735 NUTM2DQ5VT03 806 aaPredicted RBP8.36□□□□□ -1.07
MIR550A3-201ENST00000390735 NUTM2AQ8IVF1 878 aaPredicted RBP8.36□□□□□ -1.07
MIR550A3-201ENST00000390735 CCDC141Q6ZP82 1450 aa8.36□□□□□ -1.07
MIR550A3-201ENST00000390735 AFF2P51816 1311 aa8.35□□□□□ -1.07
MIR550A3-201ENST00000390735 RBM6P78332 1123 aaKnown RBP8.35□□□□□ -1.07
MIR550A3-201ENST00000390735 NWD1Q149M9 1564 aa8.35□□□□□ -1.07
MIR550A3-201ENST00000390735 MTUS2Q5JR59 1369 aa8.35□□□□□ -1.07
MIR550A3-201ENST00000390735 KDM5AP29375 1690 aaKnown RBP8.34□□□□□ -1.07
MIR550A3-201ENST00000390735 CAMSAP2Q08AD1 1489 aa8.34□□□□□ -1.07
MIR550A3-201ENST00000390735 AHDC1Q5TGY3 1603 aaPredicted RBP8.34□□□□□ -1.07
MIR550A3-201ENST00000390735 QTRT2Q9H974 415 aaKnown RBP8.34□□□□□ -1.07
MIR550A3-201ENST00000390735 ATAD2Q6PL18 1390 aa8.34□□□□□ -1.07
MIR550A3-201ENST00000390735 PIK3C2BO00750 1634 aa8.33□□□□□ -1.08
MIR550A3-201ENST00000390735 CEP152O94986 1710 aa8.33□□□□□ -1.08
MIR550A3-201ENST00000390735 TSPY4P0CV99 314 aa8.32□□□□□ -1.08
MIR550A3-201ENST00000390735 TSPY10P0CW01 314 aa8.32□□□□□ -1.08
MIR550A3-201ENST00000390735 STAG3Q9UJ98 1225 aa8.32□□□□□ -1.08
MIR550A3-201ENST00000390735 MROH1Q8NDA8 1641 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms