RNA–Protein interactions for RNA: ENST00000390448.3

TRAV20-201, Transcript of T cell receptor alpha variable 20, humanhuman

APPRIS P1 BASIC

Gene TRAV20, Length 406 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20-201ENST00000390448 PLA2R1Q13018 1463 aa14.22□□□□□ -0.13
TRAV20-201ENST00000390448 IQSEC2Q5JU85 1478 aa14.22□□□□□ -0.13
TRAV20-201ENST00000390448 TNRQ92752 1358 aa14.22□□□□□ -0.13
TRAV20-201ENST00000390448 A2ML1A8K2U0 1454 aa14.2□□□□□ -0.14
TRAV20-201ENST00000390448 THEMISQ8N1K5 641 aaPredicted RBP14.2□□□□□ -0.14
TRAV20-201ENST00000390448 SCAF1Q9H7N4 1312 aaKnown RBP14.19□□□□□ -0.14
TRAV20-201ENST00000390448 ANKLE2Q86XL3 938 aa14.19□□□□□ -0.14
TRAV20-201ENST00000390448 TCOF1Q13428 1488 aaKnown RBP14.18□□□□□ -0.14
TRAV20-201ENST00000390448 ZNF142P52746 1687 aaPredicted RBP14.18□□□□□ -0.14
TRAV20-201ENST00000390448 APLP2Q06481 763 aa14.18□□□□□ -0.14
TRAV20-201ENST00000390448 KDM5DQ9BY66 1539 aa14.17□□□□□ -0.14
TRAV20-201ENST00000390448 VPS8Q8N3P4 1428 aa14.16□□□□□ -0.14
TRAV20-201ENST00000390448 ILDR2Q71H61 639 aa14.16□□□□□ -0.14
TRAV20-201ENST00000390448 LRRC9Q6ZRR7 1453 aa14.16□□□□□ -0.14
TRAV20-201ENST00000390448 PZPP20742 1482 aa14.15□□□□□ -0.14
TRAV20-201ENST00000390448 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.15□□□□□ -0.14
TRAV20-201ENST00000390448 DNMT1P26358 1616 aaKnown RBP14.15□□□□□ -0.14
TRAV20-201ENST00000390448 MIA2Q96PC5 1412 aa14.15□□□□□ -0.14
TRAV20-201ENST00000390448 TOM1O60784 492 aa14.14□□□□□ -0.15
TRAV20-201ENST00000390448 PIP4K2BP78356 416 aa14.14□□□□□ -0.15
TRAV20-201ENST00000390448 KANK4Q5T7N3 995 aaPredicted RBP14.14□□□□□ -0.15
TRAV20-201ENST00000390448 ARHGEF5Q12774 1597 aa14.13□□□□□ -0.15
TRAV20-201ENST00000390448 FAM135AQ9P2D6 1515 aa14.13□□□□□ -0.15
TRAV20-201ENST00000390448 SOCS7O14512 581 aa14.12□□□□□ -0.15
TRAV20-201ENST00000390448 NLRP1Q9C000 1473 aa14.12□□□□□ -0.15
TRAV20-201ENST00000390448 SPATA31D1Q6ZQQ2 1576 aa14.11□□□□□ -0.15
TRAV20-201ENST00000390448 UGGT1Q9NYU2 1555 aa14.1□□□□□ -0.15
TRAV20-201ENST00000390448 MYOM3Q5VTT5 1437 aa14.09□□□□□ -0.15
TRAV20-201ENST00000390448 SHANK2Q9UPX8 1470 aa14.09□□□□□ -0.15
TRAV20-201ENST00000390448 NPHP4O75161 1426 aaPredicted RBP14.08□□□□□ -0.15
TRAV20-201ENST00000390448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.08□□□□□ -0.16
TRAV20-201ENST00000390448 RRP7BPQ9NSQ0 103 aa14.08□□□□□ -0.16
TRAV20-201ENST00000390448 CPS1P31327 1500 aa14.07□□□□□ -0.16
TRAV20-201ENST00000390448 MAP3K1Q13233 1512 aa14.06□□□□□ -0.16
TRAV20-201ENST00000390448 HSPA1LP34931 641 aa14.06□□□□□ -0.16
TRAV20-201ENST00000390448 POLR1AO95602 1720 aaPredicted RBP14.06□□□□□ -0.16
TRAV20-201ENST00000390448 ABCC3O15438 1527 aa14.05□□□□□ -0.16
TRAV20-201ENST00000390448 MAST1Q9Y2H9 1570 aa14.05□□□□□ -0.16
TRAV20-201ENST00000390448 STAG3Q9UJ98 1225 aa14.05□□□□□ -0.16
TRAV20-201ENST00000390448 SENP3Q9H4L4 574 aaPredicted RBP14.04□□□□□ -0.16
TRAV20-201ENST00000390448 KIF15Q9NS87 1388 aa14.04□□□□□ -0.16
TRAV20-201ENST00000390448 DUOX2Q9NRD8 1548 aa14.04□□□□□ -0.16
TRAV20-201ENST00000390448 NEURL4Q96JN8 1562 aa14.04□□□□□ -0.16
TRAV20-201ENST00000390448 EID1Q9Y6B2 187 aa14.03□□□□□ -0.16
TRAV20-201ENST00000390448 KANK1Q14678 1352 aa14.03□□□□□ -0.16
TRAV20-201ENST00000390448 RNF17Q9BXT8 1623 aaKnown RBP14.03□□□□□ -0.16
TRAV20-201ENST00000390448 ZC3H13Q5T200 1668 aaKnown RBP14.02□□□□□ -0.16
TRAV20-201ENST00000390448 EIF2AK4Q9P2K8 1649 aaKnown RBP14.02□□□□□ -0.16
TRAV20-201ENST00000390448 MED14O60244 1454 aa14.02□□□□□ -0.16
TRAV20-201ENST00000390448 ERVK-7P63135 1459 aa14.02□□□□□ -0.16
TRAV20-201ENST00000390448 TXNDC2Q86VQ3 553 aa14.02□□□□□ -0.17
TRAV20-201ENST00000390448 CHIC2Q9UKJ5 165 aa14.02□□□□□ -0.17
TRAV20-201ENST00000390448 DEPDC5O75140 1603 aa14□□□□□ -0.17
TRAV20-201ENST00000390448 ABCC5O15440 1437 aa13.99□□□□□ -0.17
TRAV20-201ENST00000390448 PHF23Q9BUL5 403 aaPredicted RBP13.99□□□□□ -0.17
TRAV20-201ENST00000390448 CFAP65Q6ZU64 1925 aaKnown RBP13.99□□□□□ -0.17
TRAV20-201ENST00000390448 VWDEQ8N2E2 1590 aa13.99□□□□□ -0.17
TRAV20-201ENST00000390448 ERBINQ96RT1 1412 aa13.98□□□□□ -0.17
TRAV20-201ENST00000390448 ANKRD30AQ9BXX3 1397 aa13.98□□□□□ -0.17
TRAV20-201ENST00000390448 IQGAP1P46940 1657 aa13.98□□□□□ -0.17
TRAV20-201ENST00000390448 FAM50AQ14320 339 aaKnown RBP13.97□□□□□ -0.17
TRAV20-201ENST00000390448 SCAF11Q99590 1463 aaKnown RBP13.97□□□□□ -0.17
TRAV20-201ENST00000390448 DAPK1P53355 1430 aa13.97□□□□□ -0.17
TRAV20-201ENST00000390448 PTPN23Q9H3S7 1636 aa13.97□□□□□ -0.17
TRAV20-201ENST00000390448 CEP152O94986 1710 aa13.96□□□□□ -0.17
TRAV20-201ENST00000390448 LTKP29376 864 aa13.96□□□□□ -0.17
TRAV20-201ENST00000390448 BCANQ96GW7 911 aa13.96□□□□□ -0.17
TRAV20-201ENST00000390448 ARHGAP31Q2M1Z3 1444 aa13.96□□□□□ -0.18
TRAV20-201ENST00000390448 MROH1Q8NDA8 1641 aa13.95□□□□□ -0.18
TRAV20-201ENST00000390448 FGD6Q6ZV73 1430 aa13.95□□□□□ -0.18
TRAV20-201ENST00000390448 LRRC7Q96NW7 1537 aa13.94□□□□□ -0.18
TRAV20-201ENST00000390448 PRDM15P57071 1507 aaPredicted RBP13.93□□□□□ -0.18
TRAV20-201ENST00000390448 IDI1Q13907 227 aa13.92□□□□□ -0.18
TRAV20-201ENST00000390448 TMEM2Q9UHN6 1383 aa13.92□□□□□ -0.18
TRAV20-201ENST00000390448 UBR1Q8IWV7 1749 aa13.92□□□□□ -0.18
TRAV20-201ENST00000390448 CROCC2H7BZ55 1655 aa13.91□□□□□ -0.18
TRAV20-201ENST00000390448 SLC26A8Q96RN1 970 aa13.9□□□□□ -0.18
TRAV20-201ENST00000390448 MED1Q15648 1581 aaPredicted RBP13.9□□□□□ -0.18
TRAV20-201ENST00000390448 SLIT1O75093 1534 aa13.9□□□□□ -0.19
TRAV20-201ENST00000390448 ARHGAP23Q9P227 1491 aa13.89□□□□□ -0.19
TRAV20-201ENST00000390448 PROSER2Q86WR7 435 aaPredicted RBP13.89□□□□□ -0.19
TRAV20-201ENST00000390448 SLC52A1Q9NWF4 448 aa13.89□□□□□ -0.19
TRAV20-201ENST00000390448 SYNMO15061 1565 aa13.88□□□□□ -0.19
TRAV20-201ENST00000390448 HDGFP51858 240 aaKnown RBP13.88□□□□□ -0.19
TRAV20-201ENST00000390448 PIK3C2BO00750 1634 aa13.87□□□□□ -0.19
TRAV20-201ENST00000390448 STRCP1A6NGW2 1772 aa13.87□□□□□ -0.19
TRAV20-201ENST00000390448 EFCAB6Q5THR3 1501 aa13.87□□□□□ -0.19
TRAV20-201ENST00000390448 PPP1R15AO75807 674 aaPredicted RBP13.87□□□□□ -0.19
TRAV20-201ENST00000390448 KCNA6P17658 529 aa13.87□□□□□ -0.19
TRAV20-201ENST00000390448 CHGAP10645 457 aaKnown RBP13.86□□□□□ -0.19
TRAV20-201ENST00000390448 RBM33Q96EV2 1170 aaKnown RBP13.85□□□□□ -0.19
TRAV20-201ENST00000390448 LMTK2Q8IWU2 1503 aa13.85□□□□□ -0.19
TRAV20-201ENST00000390448 TMEM94Q12767 1356 aa13.84□□□□□ -0.19
TRAV20-201ENST00000390448 ANKRD50Q9ULJ7 1429 aa13.84□□□□□ -0.19
TRAV20-201ENST00000390448 ALKQ9UM73 1620 aa13.84□□□□□ -0.19
TRAV20-201ENST00000390448 NOS1P29475 1434 aa13.81□□□□□ -0.2
TRAV20-201ENST00000390448 ADGRL2O95490 1459 aa13.81□□□□□ -0.2
TRAV20-201ENST00000390448 ITGAEP38570 1179 aa13.81□□□□□ -0.2
TRAV20-201ENST00000390448 C14orf37Q86TY3 774 aa13.81□□□□□ -0.2
TRAV20-201ENST00000390448 MSH6P52701 1360 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms