RNA–Protein interactions for RNA: ENST00000390445.2

TRAV17-201, Transcript of T cell receptor alpha variable 17, humanhuman

APPRIS P1 BASIC

Gene TRAV17, Length 484 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17-201ENST00000390445 ABCC1P33527 1531 aa13.6□□□□□ -0.23
TRAV17-201ENST00000390445 DCAF8Q5TAQ9 597 aa13.6□□□□□ -0.23
TRAV17-201ENST00000390445 EFCAB2Q5VUJ9 269 aa13.6□□□□□ -0.23
TRAV17-201ENST00000390445 FAM212AQ96EL1 285 aa13.6□□□□□ -0.23
TRAV17-201ENST00000390445 DIP2CQ9Y2E4 1556 aa13.59□□□□□ -0.23
TRAV17-201ENST00000390445 KIDINS220Q9ULH0 1771 aa13.59□□□□□ -0.23
TRAV17-201ENST00000390445 ECM2O94769 699 aaPredicted RBP13.59□□□□□ -0.23
TRAV17-201ENST00000390445 MLECQ14165 292 aa13.58□□□□□ -0.24
TRAV17-201ENST00000390445 GSE1Q14687 1217 aa13.58□□□□□ -0.24
TRAV17-201ENST00000390445 ZNF518AQ6AHZ1 1483 aa13.58□□□□□ -0.24
TRAV17-201ENST00000390445 ARHGEF12Q9NZN5 1544 aa13.58□□□□□ -0.24
TRAV17-201ENST00000390445 ATP10AO60312 1499 aa13.57□□□□□ -0.24
TRAV17-201ENST00000390445 SAMD9LQ8IVG5 1584 aa13.57□□□□□ -0.24
TRAV17-201ENST00000390445 C9orf84Q5VXU9 1444 aa13.56□□□□□ -0.24
TRAV17-201ENST00000390445 LMTK3Q96Q04 1460 aa13.56□□□□□ -0.24
TRAV17-201ENST00000390445 AFAP1Q8N556 730 aa13.56□□□□□ -0.24
TRAV17-201ENST00000390445 ILDR1Q86SU0 546 aaPredicted RBP13.54□□□□□ -0.24
TRAV17-201ENST00000390445 TSPYL2Q9H2G4 693 aaPredicted RBP13.54□□□□□ -0.24
TRAV17-201ENST00000390445 TRAPPC8Q9Y2L5 1435 aa13.54□□□□□ -0.24
TRAV17-201ENST00000390445 C3P01024 1663 aa13.53□□□□□ -0.24
TRAV17-201ENST00000390445 PREX1Q8TCU6 1659 aa13.53□□□□□ -0.24
TRAV17-201ENST00000390445 SUPT6HQ7KZ85 1726 aaKnown RBP13.53□□□□□ -0.24
TRAV17-201ENST00000390445 SYCP2Q9BX26 1530 aa13.53□□□□□ -0.24
TRAV17-201ENST00000390445 SETD1BQ9UPS6 1966 aaKnown RBP13.52□□□□□ -0.24
TRAV17-201ENST00000390445 REREQ9P2R6 1566 aa13.52□□□□□ -0.25
TRAV17-201ENST00000390445 MYT1LQ9UL68 1186 aa13.51□□□□□ -0.25
TRAV17-201ENST00000390445 GPATCH8Q9UKJ3 1502 aaKnown RBP13.5□□□□□ -0.25
TRAV17-201ENST00000390445 MLH3Q9UHC1 1453 aa13.5□□□□□ -0.25
TRAV17-201ENST00000390445 RGL2O15211 777 aa13.5□□□□□ -0.25
TRAV17-201ENST00000390445 SP7Q8TDD2 431 aaPredicted RBP13.5□□□□□ -0.25
TRAV17-201ENST00000390445 TIAM1Q13009 1591 aa13.49□□□□□ -0.25
TRAV17-201ENST00000390445 CEP162Q5TB80 1403 aa13.49□□□□□ -0.25
TRAV17-201ENST00000390445 ZNF777Q9ULD5 760 aaPredicted RBP13.48□□□□□ -0.25
TRAV17-201ENST00000390445 INO80Q9ULG1 1556 aaPredicted RBP13.47□□□□□ -0.25
TRAV17-201ENST00000390445 HSPA2P54652 639 aa13.47□□□□□ -0.25
TRAV17-201ENST00000390445 EHBP1L1Q8N3D4 1523 aa13.47□□□□□ -0.25
TRAV17-201ENST00000390445 STRCQ7RTU9 1775 aa13.46□□□□□ -0.25
TRAV17-201ENST00000390445 CEBPAP49715 358 aaPredicted RBP13.46□□□□□ -0.25
TRAV17-201ENST00000390445 AGLP35573 1532 aa13.45□□□□□ -0.26
TRAV17-201ENST00000390445 ADGBQ8N7X0 1667 aa13.45□□□□□ -0.26
TRAV17-201ENST00000390445 MTUS2Q5JR59 1369 aa13.45□□□□□ -0.26
TRAV17-201ENST00000390445 ATP7AQ04656 1500 aa13.44□□□□□ -0.26
TRAV17-201ENST00000390445 CLTCQ00610 1675 aaKnown RBP13.44□□□□□ -0.26
TRAV17-201ENST00000390445 PYGBP11216 843 aa13.44□□□□□ -0.26
TRAV17-201ENST00000390445 CD44P16070 742 aaKnown RBP13.44□□□□□ -0.26
TRAV17-201ENST00000390445 RNF25Q96BH1 459 aaPredicted RBP13.44□□□□□ -0.26
TRAV17-201ENST00000390445 CCDC61Q9Y6R9 512 aa13.44□□□□□ -0.26
TRAV17-201ENST00000390445 HNRNPMP52272 730 aaKnown RBP eCLIP13.43□□□□□ -0.26
TRAV17-201ENST00000390445 CCNB3Q8WWL7 1395 aa13.43□□□□□ -0.26
TRAV17-201ENST00000390445 MROH2AA6NES4 1674 aa13.42□□□□□ -0.26
TRAV17-201ENST00000390445 LOC105371045A0A1W2PR82 267 aa13.41□□□□□ -0.26
TRAV17-201ENST00000390445 C19orf67A6NJJ6 358 aa13.41□□□□□ -0.26
TRAV17-201ENST00000390445 PLXNC1O60486 1568 aa13.41□□□□□ -0.26
TRAV17-201ENST00000390445 PAK3O75914 559 aaPredicted RBP13.4□□□□□ -0.26
TRAV17-201ENST00000390445 CHRM1P11229 460 aaPredicted RBP13.4□□□□□ -0.26
TRAV17-201ENST00000390445 CFDP1Q9UEE9 299 aaPredicted RBP13.4□□□□□ -0.26
TRAV17-201ENST00000390445 PLEKHH2Q8IVE3 1493 aa13.39□□□□□ -0.27
TRAV17-201ENST00000390445 KIAA1107Q9UPP5 1409 aa13.39□□□□□ -0.27
TRAV17-201ENST00000390445 SPAG9O60271 1321 aaKnown RBP13.39□□□□□ -0.27
TRAV17-201ENST00000390445 ZNF644Q9H582 1327 aaPredicted RBP13.39□□□□□ -0.27
TRAV17-201ENST00000390445 HAX1O00165 279 aa13.38□□□□□ -0.27
TRAV17-201ENST00000390445 ZRANB1Q9UGI0 708 aa13.38□□□□□ -0.27
TRAV17-201ENST00000390445 NCOA2Q15596 1464 aa13.37□□□□□ -0.27
TRAV17-201ENST00000390445 A2MP01023 1474 aa13.36□□□□□ -0.27
TRAV17-201ENST00000390445 MBD5Q9P267 1494 aa13.36□□□□□ -0.27
TRAV17-201ENST00000390445 UHRF1BP1Q6BDS2 1440 aa13.35□□□□□ -0.27
TRAV17-201ENST00000390445 CAMSAP2Q08AD1 1489 aa13.35□□□□□ -0.27
TRAV17-201ENST00000390445 VPS8Q8N3P4 1428 aa13.34□□□□□ -0.27
TRAV17-201ENST00000390445 CFAP65Q6ZU64 1925 aaKnown RBP13.34□□□□□ -0.27
TRAV17-201ENST00000390445 MYO3AQ8NEV4 1616 aa13.33□□□□□ -0.28
TRAV17-201ENST00000390445 ESF1Q9H501 851 aaKnown RBP13.33□□□□□ -0.28
TRAV17-201ENST00000390445 CNTLNQ9NXG0 1405 aa13.32□□□□□ -0.28
TRAV17-201ENST00000390445 ZNF142P52746 1687 aaPredicted RBP13.32□□□□□ -0.28
TRAV17-201ENST00000390445 EVX2Q03828 476 aa13.32□□□□□ -0.28
TRAV17-201ENST00000390445 PHF12Q96QT6 1004 aa13.32□□□□□ -0.28
TRAV17-201ENST00000390445 LRRC9Q6ZRR7 1453 aa13.31□□□□□ -0.28
TRAV17-201ENST00000390445 RIOK3O14730 519 aaKnown RBP13.31□□□□□ -0.28
TRAV17-201ENST00000390445 FBXO41Q8TF61 875 aa13.31□□□□□ -0.28
TRAV17-201ENST00000390445 CCDC141Q6ZP82 1450 aa13.3□□□□□ -0.28
TRAV17-201ENST00000390445 ARHGEF5Q12774 1597 aa13.3□□□□□ -0.28
TRAV17-201ENST00000390445 KIF12Q96FN5 646 aa13.3□□□□□ -0.28
TRAV17-201ENST00000390445 ZMYM3Q14202 1370 aa13.29□□□□□ -0.28
TRAV17-201ENST00000390445 CAMSAP1Q5T5Y3 1602 aa13.28□□□□□ -0.28
TRAV17-201ENST00000390445 GGT6Q6P531 493 aa13.28□□□□□ -0.28
TRAV17-201ENST00000390445 MAP3K13O43283 966 aa13.27□□□□□ -0.29
TRAV17-201ENST00000390445 KANK4Q5T7N3 995 aaPredicted RBP13.27□□□□□ -0.29
TRAV17-201ENST00000390445 ZNF579Q8NAF0 562 aaKnown RBP13.27□□□□□ -0.29
TRAV17-201ENST00000390445 RTEL1-TNFRSF6BF6WH68 1400 aa13.27□□□□□ -0.29
TRAV17-201ENST00000390445 CROCC2H7BZ55 1655 aa13.27□□□□□ -0.29
TRAV17-201ENST00000390445 CEP152O94986 1710 aa13.26□□□□□ -0.29
TRAV17-201ENST00000390445 NPATQ14207 1427 aa13.26□□□□□ -0.29
TRAV17-201ENST00000390445 PCDHB8Q9UN66 801 aa13.26□□□□□ -0.29
TRAV17-201ENST00000390445 CEP170BQ9Y4F5 1589 aaPredicted RBP13.26□□□□□ -0.29
TRAV17-201ENST00000390445 PCDHB13Q9Y5F0 798 aa13.26□□□□□ -0.29
TRAV17-201ENST00000390445 MAP3K1Q13233 1512 aa13.25□□□□□ -0.29
TRAV17-201ENST00000390445 POLR1AO95602 1720 aaPredicted RBP13.25□□□□□ -0.29
TRAV17-201ENST00000390445 MAST1Q9Y2H9 1570 aa13.24□□□□□ -0.29
TRAV17-201ENST00000390445 PTPRKQ15262 1439 aa13.24□□□□□ -0.29
TRAV17-201ENST00000390445 DHX29Q7Z478 1369 aaKnown RBP13.24□□□□□ -0.29
TRAV17-201ENST00000390445 NCOA1Q15788 1441 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms