RNA–Protein interactions for RNA: ENST00000390436.2

TRAV13-1-201, Transcript of T cell receptor alpha variable 13-1, humanhuman

APPRIS P1 BASIC

Gene TRAV13-1, Length 360 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1-201ENST00000390436 PLXNC1O60486 1568 aa11.01□□□□□ -0.65
TRAV13-1-201ENST00000390436 INO80Q9ULG1 1556 aaPredicted RBP11.01□□□□□ -0.65
TRAV13-1-201ENST00000390436 MYO3AQ8NEV4 1616 aa11.01□□□□□ -0.65
TRAV13-1-201ENST00000390436 MYT1LQ9UL68 1186 aa11□□□□□ -0.65
TRAV13-1-201ENST00000390436 ZNF142P52746 1687 aaPredicted RBP11□□□□□ -0.65
TRAV13-1-201ENST00000390436 ZNF644Q9H582 1327 aaPredicted RBP11□□□□□ -0.65
TRAV13-1-201ENST00000390436 ZNF777Q9ULD5 760 aaPredicted RBP10.99□□□□□ -0.65
TRAV13-1-201ENST00000390436 ZMYM3Q14202 1370 aa10.99□□□□□ -0.65
TRAV13-1-201ENST00000390436 CLIP1P30622 1438 aa10.99□□□□□ -0.65
TRAV13-1-201ENST00000390436 PTPRKQ15262 1439 aa10.98□□□□□ -0.65
TRAV13-1-201ENST00000390436 ATP7AQ04656 1500 aa10.98□□□□□ -0.65
TRAV13-1-201ENST00000390436 ALKQ9UM73 1620 aa10.98□□□□□ -0.65
TRAV13-1-201ENST00000390436 ADGBQ8N7X0 1667 aa10.97□□□□□ -0.65
TRAV13-1-201ENST00000390436 CEP170BQ9Y4F5 1589 aaPredicted RBP10.96□□□□□ -0.65
TRAV13-1-201ENST00000390436 PROM2Q8N271 834 aa10.96□□□□□ -0.65
TRAV13-1-201ENST00000390436 CDK11AQ9UQ88 783 aaPredicted RBP10.96□□□□□ -0.65
TRAV13-1-201ENST00000390436 STRCP1A6NGW2 1772 aa10.95□□□□□ -0.66
TRAV13-1-201ENST00000390436 NEURL4Q96JN8 1562 aa10.95□□□□□ -0.66
TRAV13-1-201ENST00000390436 TCOF1Q13428 1488 aaKnown RBP10.95□□□□□ -0.66
TRAV13-1-201ENST00000390436 DNMT1P26358 1616 aaKnown RBP10.95□□□□□ -0.66
TRAV13-1-201ENST00000390436 TIAM1Q13009 1591 aa10.94□□□□□ -0.66
TRAV13-1-201ENST00000390436 CCDC18Q5T9S5 1454 aa10.94□□□□□ -0.66
TRAV13-1-201ENST00000390436 NPATQ14207 1427 aa10.94□□□□□ -0.66
TRAV13-1-201ENST00000390436 A2MP01023 1474 aa10.93□□□□□ -0.66
TRAV13-1-201ENST00000390436 FYCO1Q9BQS8 1478 aa10.93□□□□□ -0.66
TRAV13-1-201ENST00000390436 FBXO31Q5XUX0 539 aaPredicted RBP10.93□□□□□ -0.66
TRAV13-1-201ENST00000390436 MBD5Q9P267 1494 aa10.93□□□□□ -0.66
TRAV13-1-201ENST00000390436 SPAG9O60271 1321 aaKnown RBP10.92□□□□□ -0.66
TRAV13-1-201ENST00000390436 IQSEC2Q5JU85 1478 aa10.92□□□□□ -0.66
TRAV13-1-201ENST00000390436 CNTLNQ9NXG0 1405 aa10.92□□□□□ -0.66
TRAV13-1-201ENST00000390436 GGT6Q6P531 493 aa10.91□□□□□ -0.66
TRAV13-1-201ENST00000390436 POLR1AO95602 1720 aaPredicted RBP10.91□□□□□ -0.66
TRAV13-1-201ENST00000390436 CFAP65Q6ZU64 1925 aaKnown RBP10.91□□□□□ -0.66
TRAV13-1-201ENST00000390436 PLA2R1Q13018 1463 aa10.89□□□□□ -0.67
TRAV13-1-201ENST00000390436 UBAP1LF5GYI3 381 aa10.89□□□□□ -0.67
TRAV13-1-201ENST00000390436 KIAA1107Q9UPP5 1409 aa10.89□□□□□ -0.67
TRAV13-1-201ENST00000390436 SPDYE2BA6NHP3 402 aa10.88□□□□□ -0.67
TRAV13-1-201ENST00000390436 SPDYE6P0CI01 402 aa10.88□□□□□ -0.67
TRAV13-1-201ENST00000390436 HSPA1LP34931 641 aa10.88□□□□□ -0.67
TRAV13-1-201ENST00000390436 MED1Q15648 1581 aaPredicted RBP10.88□□□□□ -0.67
TRAV13-1-201ENST00000390436 SPDYE2Q495Y8 402 aa10.88□□□□□ -0.67
TRAV13-1-201ENST00000390436 VWDEQ8N2E2 1590 aa10.88□□□□□ -0.67
TRAV13-1-201ENST00000390436 ESF1Q9H501 851 aaKnown RBP10.87□□□□□ -0.67
TRAV13-1-201ENST00000390436 A2ML1A8K2U0 1454 aa10.87□□□□□ -0.67
TRAV13-1-201ENST00000390436 XIRP1Q702N8 1843 aaKnown RBP10.86□□□□□ -0.67
TRAV13-1-201ENST00000390436 CFDP1Q9UEE9 299 aaPredicted RBP10.86□□□□□ -0.67
TRAV13-1-201ENST00000390436 ZNF692Q9BU19 519 aaPredicted RBP10.85□□□□□ -0.67
TRAV13-1-201ENST00000390436 CCNB3Q8WWL7 1395 aa10.85□□□□□ -0.67
TRAV13-1-201ENST00000390436 SSUH2Q9Y2M2 353 aa10.84□□□□□ -0.67
TRAV13-1-201ENST00000390436 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.83□□□□□ -0.68
TRAV13-1-201ENST00000390436 MROH1Q8NDA8 1641 aa10.83□□□□□ -0.68
TRAV13-1-201ENST00000390436 SHANK2Q9UPX8 1470 aa10.82□□□□□ -0.68
TRAV13-1-201ENST00000390436 DHX29Q7Z478 1369 aaKnown RBP10.82□□□□□ -0.68
TRAV13-1-201ENST00000390436 PIP4K2BP78356 416 aa10.82□□□□□ -0.68
TRAV13-1-201ENST00000390436 PKD2Q13563 968 aa10.82□□□□□ -0.68
TRAV13-1-201ENST00000390436 ZC3H13Q5T200 1668 aaKnown RBP10.82□□□□□ -0.68
TRAV13-1-201ENST00000390436 CAMSAP2Q08AD1 1489 aa10.81□□□□□ -0.68
TRAV13-1-201ENST00000390436 PLEKHH2Q8IVE3 1493 aa10.81□□□□□ -0.68
TRAV13-1-201ENST00000390436 CEP152O94986 1710 aa10.81□□□□□ -0.68
TRAV13-1-201ENST00000390436 TNRQ92752 1358 aa10.81□□□□□ -0.68
TRAV13-1-201ENST00000390436 PZPP20742 1482 aa10.81□□□□□ -0.68
TRAV13-1-201ENST00000390436 MTUS2Q5JR59 1369 aa10.8□□□□□ -0.68
TRAV13-1-201ENST00000390436 KIF3BO15066 747 aa10.8□□□□□ -0.68
TRAV13-1-201ENST00000390436 NCOA2Q15596 1464 aa10.8□□□□□ -0.68
TRAV13-1-201ENST00000390436 EHBP1L1Q8N3D4 1523 aa10.79□□□□□ -0.68
TRAV13-1-201ENST00000390436 RTEL1-TNFRSF6BF6WH68 1400 aa10.79□□□□□ -0.68
TRAV13-1-201ENST00000390436 CEP162Q5TB80 1403 aa10.79□□□□□ -0.68
TRAV13-1-201ENST00000390436 FBXO3Q9UK99 471 aa10.79□□□□□ -0.68
TRAV13-1-201ENST00000390436 IQGAP1P46940 1657 aa10.79□□□□□ -0.68
TRAV13-1-201ENST00000390436 KDM5DQ9BY66 1539 aa10.79□□□□□ -0.68
TRAV13-1-201ENST00000390436 LRRC7Q96NW7 1537 aa10.78□□□□□ -0.68
TRAV13-1-201ENST00000390436 UBR1Q8IWV7 1749 aa10.78□□□□□ -0.68
TRAV13-1-201ENST00000390436 DEPDC5O75140 1603 aa10.77□□□□□ -0.68
TRAV13-1-201ENST00000390436 RNF17Q9BXT8 1623 aaKnown RBP10.77□□□□□ -0.68
TRAV13-1-201ENST00000390436 MIA2Q96PC5 1412 aa10.77□□□□□ -0.68
TRAV13-1-201ENST00000390436 MED14O60244 1454 aa10.77□□□□□ -0.69
TRAV13-1-201ENST00000390436 RGS17Q9UGC6 210 aaPredicted RBP10.77□□□□□ -0.69
TRAV13-1-201ENST00000390436 CCDC141Q6ZP82 1450 aa10.76□□□□□ -0.69
TRAV13-1-201ENST00000390436 ABCC3O15438 1527 aa10.76□□□□□ -0.69
TRAV13-1-201ENST00000390436 CPS1P31327 1500 aa10.76□□□□□ -0.69
TRAV13-1-201ENST00000390436 UGGT1Q9NYU2 1555 aa10.76□□□□□ -0.69
TRAV13-1-201ENST00000390436 NPHP4O75161 1426 aaPredicted RBP10.75□□□□□ -0.69
TRAV13-1-201ENST00000390436 ARHGEF5Q12774 1597 aa10.75□□□□□ -0.69
TRAV13-1-201ENST00000390436 KANK4Q5T7N3 995 aaPredicted RBP10.74□□□□□ -0.69
TRAV13-1-201ENST00000390436 LTKP29376 864 aa10.73□□□□□ -0.69
TRAV13-1-201ENST00000390436 ERVK-7P63135 1459 aa10.73□□□□□ -0.69
TRAV13-1-201ENST00000390436 WASHC2CQ9Y4E1 1318 aa10.72□□□□□ -0.69
TRAV13-1-201ENST00000390436 ANKLE2Q86XL3 938 aa10.71□□□□□ -0.69
TRAV13-1-201ENST00000390436 NLRP1Q9C000 1473 aa10.71□□□□□ -0.69
TRAV13-1-201ENST00000390436 MAST1Q9Y2H9 1570 aa10.71□□□□□ -0.69
TRAV13-1-201ENST00000390436 PIK3C2BO00750 1634 aa10.7□□□□□ -0.7
TRAV13-1-201ENST00000390436 LOC105371045A0A1W2PR82 267 aa10.7□□□□□ -0.7
TRAV13-1-201ENST00000390436 RBM33Q96EV2 1170 aaKnown RBP10.69□□□□□ -0.7
TRAV13-1-201ENST00000390436 RBM42Q9BTD8 480 aaKnown RBP10.69□□□□□ -0.7
TRAV13-1-201ENST00000390436 MYO5BQ9ULV0 1848 aa10.69□□□□□ -0.7
TRAV13-1-201ENST00000390436 FAM135AQ9P2D6 1515 aa10.68□□□□□ -0.7
TRAV13-1-201ENST00000390436 ARHGAP23Q9P227 1491 aa10.68□□□□□ -0.7
TRAV13-1-201ENST00000390436 SETD1AO15047 1707 aaKnown RBP10.68□□□□□ -0.7
TRAV13-1-201ENST00000390436 TOM1O60784 492 aa10.68□□□□□ -0.7
TRAV13-1-201ENST00000390436 EIF2AK4Q9P2K8 1649 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms