RNA–Protein interactions for RNA: ENST00000390428.3

TRAV6-201, Transcript of T cell receptor alpha variable 6, humanhuman

APPRIS P1 BASIC

Gene TRAV6, Length 404 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6-201ENST00000390428 CLIP1P30622 1438 aa12.66□□□□□ -0.38
TRAV6-201ENST00000390428 MLECQ14165 292 aa12.66□□□□□ -0.38
TRAV6-201ENST00000390428 CDC42BPBQ9Y5S2 1711 aa12.65□□□□□ -0.38
TRAV6-201ENST00000390428 C9orf84Q5VXU9 1444 aa12.65□□□□□ -0.38
TRAV6-201ENST00000390428 ARHGAP5Q13017 1502 aa12.65□□□□□ -0.38
TRAV6-201ENST00000390428 ARHGEF12Q9NZN5 1544 aa12.65□□□□□ -0.38
TRAV6-201ENST00000390428 ZNF518AQ6AHZ1 1483 aa12.65□□□□□ -0.38
TRAV6-201ENST00000390428 KDM5CP41229 1560 aa12.64□□□□□ -0.39
TRAV6-201ENST00000390428 GALR2O43603 387 aaPredicted RBP12.64□□□□□ -0.39
TRAV6-201ENST00000390428 HSPA2P54652 639 aa12.64□□□□□ -0.39
TRAV6-201ENST00000390428 KLHL34Q8N239 644 aa12.63□□□□□ -0.39
TRAV6-201ENST00000390428 SETD1BQ9UPS6 1966 aaKnown RBP12.62□□□□□ -0.39
TRAV6-201ENST00000390428 IFNLR1Q8IU57 520 aaPredicted RBP12.62□□□□□ -0.39
TRAV6-201ENST00000390428 AFAP1Q8N556 730 aa12.62□□□□□ -0.39
TRAV6-201ENST00000390428 PREX2Q70Z35 1606 aa12.61□□□□□ -0.39
TRAV6-201ENST00000390428 CCDC18Q5T9S5 1454 aa12.6□□□□□ -0.39
TRAV6-201ENST00000390428 CASKIN1Q8WXD9 1431 aa12.6□□□□□ -0.39
TRAV6-201ENST00000390428 PREX1Q8TCU6 1659 aa12.6□□□□□ -0.39
TRAV6-201ENST00000390428 DIP2CQ9Y2E4 1556 aa12.6□□□□□ -0.39
TRAV6-201ENST00000390428 POTEIP0CG38 1075 aa12.59□□□□□ -0.39
TRAV6-201ENST00000390428 REREQ9P2R6 1566 aa12.59□□□□□ -0.39
TRAV6-201ENST00000390428 CDC42BPAQ5VT25 1732 aa12.59□□□□□ -0.39
TRAV6-201ENST00000390428 ITSN2Q9NZM3 1697 aa12.58□□□□□ -0.4
TRAV6-201ENST00000390428 MYT1LQ9UL68 1186 aa12.58□□□□□ -0.4
TRAV6-201ENST00000390428 ABCA6Q8N139 1617 aa12.58□□□□□ -0.4
TRAV6-201ENST00000390428 MLH3Q9UHC1 1453 aa12.58□□□□□ -0.4
TRAV6-201ENST00000390428 ABCC1P33527 1531 aa12.57□□□□□ -0.4
TRAV6-201ENST00000390428 CEBPAP49715 358 aaPredicted RBP12.57□□□□□ -0.4
TRAV6-201ENST00000390428 FAM212AQ96EL1 285 aa12.57□□□□□ -0.4
TRAV6-201ENST00000390428 KIF12Q96FN5 646 aa12.57□□□□□ -0.4
TRAV6-201ENST00000390428 TRAPPC8Q9Y2L5 1435 aa12.56□□□□□ -0.4
TRAV6-201ENST00000390428 MS4A3Q96HJ5 214 aa12.56□□□□□ -0.4
TRAV6-201ENST00000390428 FYCO1Q9BQS8 1478 aa12.55□□□□□ -0.4
TRAV6-201ENST00000390428 KIDINS220Q9ULH0 1771 aa12.55□□□□□ -0.4
TRAV6-201ENST00000390428 STRCQ7RTU9 1775 aa12.54□□□□□ -0.4
TRAV6-201ENST00000390428 AGLP35573 1532 aa12.54□□□□□ -0.4
TRAV6-201ENST00000390428 C3P01024 1663 aa12.54□□□□□ -0.4
TRAV6-201ENST00000390428 DCAF8Q5TAQ9 597 aa12.53□□□□□ -0.4
TRAV6-201ENST00000390428 MAP3K13O43283 966 aa12.52□□□□□ -0.41
TRAV6-201ENST00000390428 CERKQ8TCT0 537 aa12.52□□□□□ -0.41
TRAV6-201ENST00000390428 DCBLD2Q96PD2 775 aa12.52□□□□□ -0.41
TRAV6-201ENST00000390428 UHRF1BP1Q6BDS2 1440 aa12.52□□□□□ -0.41
TRAV6-201ENST00000390428 SAMD9LQ8IVG5 1584 aa12.51□□□□□ -0.41
TRAV6-201ENST00000390428 GPATCH8Q9UKJ3 1502 aaKnown RBP12.5□□□□□ -0.41
TRAV6-201ENST00000390428 SPOCK2Q92563 424 aa12.49□□□□□ -0.41
TRAV6-201ENST00000390428 ZNF777Q9ULD5 760 aaPredicted RBP12.49□□□□□ -0.41
TRAV6-201ENST00000390428 SYCP2Q9BX26 1530 aa12.48□□□□□ -0.41
TRAV6-201ENST00000390428 ESF1Q9H501 851 aaKnown RBP12.48□□□□□ -0.41
TRAV6-201ENST00000390428 CNTLNQ9NXG0 1405 aa12.47□□□□□ -0.41
TRAV6-201ENST00000390428 SUPT6HQ7KZ85 1726 aaKnown RBP12.47□□□□□ -0.41
TRAV6-201ENST00000390428 MROH2AA6NES4 1674 aa12.46□□□□□ -0.41
TRAV6-201ENST00000390428 HNRNPMP52272 730 aaKnown RBP eCLIP12.46□□□□□ -0.41
TRAV6-201ENST00000390428 KIAA1107Q9UPP5 1409 aa12.45□□□□□ -0.42
TRAV6-201ENST00000390428 SPAG9O60271 1321 aaKnown RBP12.45□□□□□ -0.42
TRAV6-201ENST00000390428 GSE1Q14687 1217 aa12.45□□□□□ -0.42
TRAV6-201ENST00000390428 ATP7AQ04656 1500 aa12.45□□□□□ -0.42
TRAV6-201ENST00000390428 PLEKHH2Q8IVE3 1493 aa12.45□□□□□ -0.42
TRAV6-201ENST00000390428 CCNB3Q8WWL7 1395 aa12.44□□□□□ -0.42
TRAV6-201ENST00000390428 INO80Q9ULG1 1556 aaPredicted RBP12.44□□□□□ -0.42
TRAV6-201ENST00000390428 SGIP1Q9BQI5 828 aa12.44□□□□□ -0.42
TRAV6-201ENST00000390428 CFDP1Q9UEE9 299 aaPredicted RBP12.44□□□□□ -0.42
TRAV6-201ENST00000390428 PTPRTO14522 1441 aa12.44□□□□□ -0.42
TRAV6-201ENST00000390428 MTUS2Q5JR59 1369 aa12.43□□□□□ -0.42
TRAV6-201ENST00000390428 TRPC6Q9Y210 931 aa12.43□□□□□ -0.42
TRAV6-201ENST00000390428 PLXNC1O60486 1568 aa12.43□□□□□ -0.42
TRAV6-201ENST00000390428 CLTCQ00610 1675 aaKnown RBP12.42□□□□□ -0.42
TRAV6-201ENST00000390428 PYGBP11216 843 aa12.42□□□□□ -0.42
TRAV6-201ENST00000390428 PCDHB13Q9Y5F0 798 aa12.42□□□□□ -0.42
TRAV6-201ENST00000390428 NPATQ14207 1427 aa12.42□□□□□ -0.42
TRAV6-201ENST00000390428 ZMYM3Q14202 1370 aa12.42□□□□□ -0.42
TRAV6-201ENST00000390428 A2MP01023 1474 aa12.41□□□□□ -0.42
TRAV6-201ENST00000390428 ADGBQ8N7X0 1667 aa12.41□□□□□ -0.42
TRAV6-201ENST00000390428 TIAM1Q13009 1591 aa12.4□□□□□ -0.42
TRAV6-201ENST00000390428 NCOA1Q15788 1441 aa12.4□□□□□ -0.42
TRAV6-201ENST00000390428 ASTLQ6HA08 431 aaPredicted RBP12.4□□□□□ -0.42
TRAV6-201ENST00000390428 EHBP1L1Q8N3D4 1523 aa12.39□□□□□ -0.43
TRAV6-201ENST00000390428 ATMINO43313 823 aaPredicted RBP12.39□□□□□ -0.43
TRAV6-201ENST00000390428 CAMSAP1Q5T5Y3 1602 aa12.38□□□□□ -0.43
TRAV6-201ENST00000390428 LTBP4Q8N2S1 1624 aa12.38□□□□□ -0.43
TRAV6-201ENST00000390428 IFNL1Q8IU54 200 aa12.38□□□□□ -0.43
TRAV6-201ENST00000390428 PELP1Q8IZL8 1130 aaKnown RBP12.38□□□□□ -0.43
TRAV6-201ENST00000390428 ZNF644Q9H582 1327 aaPredicted RBP12.37□□□□□ -0.43
TRAV6-201ENST00000390428 GGT6Q6P531 493 aa12.37□□□□□ -0.43
TRAV6-201ENST00000390428 MBD5Q9P267 1494 aa12.37□□□□□ -0.43
TRAV6-201ENST00000390428 ZNF142P52746 1687 aaPredicted RBP12.37□□□□□ -0.43
TRAV6-201ENST00000390428 MYO3AQ8NEV4 1616 aa12.37□□□□□ -0.43
TRAV6-201ENST00000390428 CEP162Q5TB80 1403 aa12.37□□□□□ -0.43
TRAV6-201ENST00000390428 PTPRKQ15262 1439 aa12.36□□□□□ -0.43
TRAV6-201ENST00000390428 TIE1P35590 1138 aa12.35□□□□□ -0.43
TRAV6-201ENST00000390428 BMP2KQ9NSY1 1161 aaPredicted RBP12.35□□□□□ -0.43
TRAV6-201ENST00000390428 CIZ1Q9ULV3 898 aaPredicted RBP12.35□□□□□ -0.43
TRAV6-201ENST00000390428 RTEL1-TNFRSF6BF6WH68 1400 aa12.35□□□□□ -0.43
TRAV6-201ENST00000390428 CHRM1P11229 460 aaPredicted RBP12.34□□□□□ -0.43
TRAV6-201ENST00000390428 CEP170BQ9Y4F5 1589 aaPredicted RBP12.34□□□□□ -0.43
TRAV6-201ENST00000390428 IQSEC2Q5JU85 1478 aa12.34□□□□□ -0.43
TRAV6-201ENST00000390428 ATN1P54259 1190 aaPredicted RBP12.33□□□□□ -0.44
TRAV6-201ENST00000390428 NCKAP5LQ9HCH0 1330 aa12.33□□□□□ -0.44
TRAV6-201ENST00000390428 PLA2R1Q13018 1463 aa12.33□□□□□ -0.44
TRAV6-201ENST00000390428 DHX29Q7Z478 1369 aaKnown RBP12.31□□□□□ -0.44
TRAV6-201ENST00000390428 NCOA2Q15596 1464 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms