RNA–Protein interactions for RNA: ENST00000390423.2

TRAV1-2-201, Transcript of T cell receptor alpha variable 1-2, humanhuman

APPRIS P1 BASIC

Gene TRAV1-2, Length 402 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2-201ENST00000390423 TNRQ92752 1358 aa10.51□□□□□ -0.73
TRAV1-2-201ENST00000390423 NPHP4O75161 1426 aaPredicted RBP10.5□□□□□ -0.73
TRAV1-2-201ENST00000390423 EEA1Q15075 1411 aa10.5□□□□□ -0.73
TRAV1-2-201ENST00000390423 IQGAP1P46940 1657 aa10.49□□□□□ -0.73
TRAV1-2-201ENST00000390423 MED14O60244 1454 aa10.49□□□□□ -0.73
TRAV1-2-201ENST00000390423 DEPDC5O75140 1603 aa10.48□□□□□ -0.73
TRAV1-2-201ENST00000390423 ANKLE2Q86XL3 938 aa10.48□□□□□ -0.73
TRAV1-2-201ENST00000390423 GPATCH8Q9UKJ3 1502 aaKnown RBP10.48□□□□□ -0.73
TRAV1-2-201ENST00000390423 SYNMO15061 1565 aa10.48□□□□□ -0.73
TRAV1-2-201ENST00000390423 ADGBQ8N7X0 1667 aa10.47□□□□□ -0.73
TRAV1-2-201ENST00000390423 PZPP20742 1482 aa10.46□□□□□ -0.74
TRAV1-2-201ENST00000390423 XIRP1Q702N8 1843 aaKnown RBP10.45□□□□□ -0.74
TRAV1-2-201ENST00000390423 UGGT1Q9NYU2 1555 aa10.45□□□□□ -0.74
TRAV1-2-201ENST00000390423 CCDC18Q5T9S5 1454 aa10.44□□□□□ -0.74
TRAV1-2-201ENST00000390423 KIAA1107Q9UPP5 1409 aa10.44□□□□□ -0.74
TRAV1-2-201ENST00000390423 UBTFP17480 764 aaKnown RBP10.44□□□□□ -0.74
TRAV1-2-201ENST00000390423 ZC3H13Q5T200 1668 aaKnown RBP10.44□□□□□ -0.74
TRAV1-2-201ENST00000390423 KDM5DQ9BY66 1539 aa10.43□□□□□ -0.74
TRAV1-2-201ENST00000390423 FAM135AQ9P2D6 1515 aa10.43□□□□□ -0.74
TRAV1-2-201ENST00000390423 NLRP1Q9C000 1473 aa10.42□□□□□ -0.74
TRAV1-2-201ENST00000390423 CASKIN1Q8WXD9 1431 aa10.42□□□□□ -0.74
TRAV1-2-201ENST00000390423 MIA2Q96PC5 1412 aa10.42□□□□□ -0.74
TRAV1-2-201ENST00000390423 ZNF644Q9H582 1327 aaPredicted RBP10.42□□□□□ -0.74
TRAV1-2-201ENST00000390423 THEMISQ8N1K5 641 aaPredicted RBP10.42□□□□□ -0.74
TRAV1-2-201ENST00000390423 PLEKHH2Q8IVE3 1493 aa10.41□□□□□ -0.74
TRAV1-2-201ENST00000390423 CFDP1Q9UEE9 299 aaPredicted RBP10.4□□□□□ -0.74
TRAV1-2-201ENST00000390423 MBD5Q9P267 1494 aa10.39□□□□□ -0.75
TRAV1-2-201ENST00000390423 KIF3BO15066 747 aa10.39□□□□□ -0.75
TRAV1-2-201ENST00000390423 DHX29Q7Z478 1369 aaKnown RBP10.39□□□□□ -0.75
TRAV1-2-201ENST00000390423 ROBO1Q9Y6N7 1651 aa10.38□□□□□ -0.75
TRAV1-2-201ENST00000390423 UPF1Q92900 1129 aaKnown RBP eCLIP10.38□□□□□ -0.75
TRAV1-2-201ENST00000390423 FAM135BQ49AJ0 1406 aa10.38□□□□□ -0.75
TRAV1-2-201ENST00000390423 WASHC2CQ9Y4E1 1318 aa10.37□□□□□ -0.75
TRAV1-2-201ENST00000390423 CCNB3Q8WWL7 1395 aa10.37□□□□□ -0.75
TRAV1-2-201ENST00000390423 FYCO1Q9BQS8 1478 aa10.36□□□□□ -0.75
TRAV1-2-201ENST00000390423 UBR1Q8IWV7 1749 aa10.36□□□□□ -0.75
TRAV1-2-201ENST00000390423 RBM33Q96EV2 1170 aaKnown RBP10.35□□□□□ -0.75
TRAV1-2-201ENST00000390423 NCOA2Q15596 1464 aa10.35□□□□□ -0.75
TRAV1-2-201ENST00000390423 SCAF11Q99590 1463 aaKnown RBP10.35□□□□□ -0.75
TRAV1-2-201ENST00000390423 TIAM1Q13009 1591 aa10.35□□□□□ -0.75
TRAV1-2-201ENST00000390423 RTEL1-TNFRSF6BF6WH68 1400 aa10.34□□□□□ -0.75
TRAV1-2-201ENST00000390423 MAP3K1Q13233 1512 aa10.34□□□□□ -0.75
TRAV1-2-201ENST00000390423 LTKP29376 864 aa10.34□□□□□ -0.75
TRAV1-2-201ENST00000390423 CHIC1Q5VXU3 224 aa10.34□□□□□ -0.75
TRAV1-2-201ENST00000390423 TRIM52Q96A61 297 aa10.34□□□□□ -0.75
TRAV1-2-201ENST00000390423 SRCAPQ6ZRS2 3230 aa10.34□□□□□ -0.75
TRAV1-2-201ENST00000390423 ERVK-7P63135 1459 aa10.34□□□□□ -0.75
TRAV1-2-201ENST00000390423 ABCC3O15438 1527 aa10.33□□□□□ -0.76
TRAV1-2-201ENST00000390423 LRP6O75581 1613 aa10.33□□□□□ -0.76
TRAV1-2-201ENST00000390423 TMEM94Q12767 1356 aa10.33□□□□□ -0.76
TRAV1-2-201ENST00000390423 PHLPP1O60346 1717 aa10.32□□□□□ -0.76
TRAV1-2-201ENST00000390423 ARHGAP23Q9P227 1491 aa10.31□□□□□ -0.76
TRAV1-2-201ENST00000390423 SLIT1O75093 1534 aa10.3□□□□□ -0.76
TRAV1-2-201ENST00000390423 TXNDC2Q86VQ3 553 aa10.3□□□□□ -0.76
TRAV1-2-201ENST00000390423 CCDC141Q6ZP82 1450 aa10.3□□□□□ -0.76
TRAV1-2-201ENST00000390423 JCADQ9P266 1359 aa10.29□□□□□ -0.76
TRAV1-2-201ENST00000390423 COL16A1Q07092 1604 aaPredicted RBP10.29□□□□□ -0.76
TRAV1-2-201ENST00000390423 MROH1Q8NDA8 1641 aa10.29□□□□□ -0.76
TRAV1-2-201ENST00000390423 CFAP65Q6ZU64 1925 aaKnown RBP10.29□□□□□ -0.76
TRAV1-2-201ENST00000390423 CEP152O94986 1710 aa10.28□□□□□ -0.76
TRAV1-2-201ENST00000390423 MTUS2Q5JR59 1369 aa10.27□□□□□ -0.76
TRAV1-2-201ENST00000390423 CAMSAP2Q08AD1 1489 aa10.27□□□□□ -0.77
TRAV1-2-201ENST00000390423 LRRC9Q6ZRR7 1453 aa10.27□□□□□ -0.77
TRAV1-2-201ENST00000390423 PIK3C2BO00750 1634 aa10.25□□□□□ -0.77
TRAV1-2-201ENST00000390423 PRDM15P57071 1507 aaPredicted RBP10.25□□□□□ -0.77
TRAV1-2-201ENST00000390423 PROSER2Q86WR7 435 aaPredicted RBP10.25□□□□□ -0.77
TRAV1-2-201ENST00000390423 SLC26A8Q96RN1 970 aa10.25□□□□□ -0.77
TRAV1-2-201ENST00000390423 KCNA6P17658 529 aa10.24□□□□□ -0.77
TRAV1-2-201ENST00000390423 MEX3CQ5U5Q3 659 aaKnown RBP10.24□□□□□ -0.77
TRAV1-2-201ENST00000390423 ZNF772Q68DY9 489 aaPredicted RBP10.24□□□□□ -0.77
TRAV1-2-201ENST00000390423 SLAIN2Q9P270 581 aa10.24□□□□□ -0.77
TRAV1-2-201ENST00000390423 TMEM2Q9UHN6 1383 aa10.24□□□□□ -0.77
TRAV1-2-201ENST00000390423 EHBP1L1Q8N3D4 1523 aa10.23□□□□□ -0.77
TRAV1-2-201ENST00000390423 NWD1Q149M9 1564 aa10.23□□□□□ -0.77
TRAV1-2-201ENST00000390423 TET3O43151 1660 aa10.23□□□□□ -0.77
TRAV1-2-201ENST00000390423 RXRBP28702 533 aa10.23□□□□□ -0.77
TRAV1-2-201ENST00000390423 EID1Q9Y6B2 187 aa10.22□□□□□ -0.77
TRAV1-2-201ENST00000390423 SPATA31A6Q5VVP1 1343 aa10.22□□□□□ -0.77
TRAV1-2-201ENST00000390423 MSH6P52701 1360 aa10.22□□□□□ -0.77
TRAV1-2-201ENST00000390423 CEP162Q5TB80 1403 aa10.22□□□□□ -0.77
TRAV1-2-201ENST00000390423 NKTRP30414 1462 aaKnown RBP10.22□□□□□ -0.77
TRAV1-2-201ENST00000390423 CDK12Q9NYV4 1490 aaPredicted RBP10.22□□□□□ -0.77
TRAV1-2-201ENST00000390423 ARHGEF5Q12774 1597 aa10.22□□□□□ -0.77
TRAV1-2-201ENST00000390423 RGS12O14924 1447 aa10.21□□□□□ -0.78
TRAV1-2-201ENST00000390423 EIF2AK4Q9P2K8 1649 aaKnown RBP10.21□□□□□ -0.78
TRAV1-2-201ENST00000390423 KDM5AP29375 1690 aaKnown RBP10.21□□□□□ -0.78
TRAV1-2-201ENST00000390423 SHPRHQ149N8 1683 aa10.21□□□□□ -0.78
TRAV1-2-201ENST00000390423 FGD6Q6ZV73 1430 aa10.2□□□□□ -0.78
TRAV1-2-201ENST00000390423 SETBP1Q9Y6X0 1596 aa10.19□□□□□ -0.78
TRAV1-2-201ENST00000390423 EFCAB6Q5THR3 1501 aa10.19□□□□□ -0.78
TRAV1-2-201ENST00000390423 NUTM2BA6NNL0 878 aaPredicted RBP10.19□□□□□ -0.78
TRAV1-2-201ENST00000390423 NUTM2EB1AL46 878 aaPredicted RBP10.19□□□□□ -0.78
TRAV1-2-201ENST00000390423 NUTM2AQ8IVF1 878 aaPredicted RBP10.19□□□□□ -0.78
TRAV1-2-201ENST00000390423 AHDC1Q5TGY3 1603 aaPredicted RBP10.18□□□□□ -0.78
TRAV1-2-201ENST00000390423 DIP2AQ14689 1571 aa10.18□□□□□ -0.78
TRAV1-2-201ENST00000390423 MAST1Q9Y2H9 1570 aa10.18□□□□□ -0.78
TRAV1-2-201ENST00000390423 ARHGAP31Q2M1Z3 1444 aa10.17□□□□□ -0.78
TRAV1-2-201ENST00000390423 AFF2P51816 1311 aa10.17□□□□□ -0.78
TRAV1-2-201ENST00000390423 RSPH4AQ5TD94 716 aa10.17□□□□□ -0.78
TRAV1-2-201ENST00000390423 TSPY4P0CV99 314 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms