RNA–Protein interactions for RNA: ENST00000390399.3

TRBV27-201, Transcript of T cell receptor beta variable 27, humanhuman

APPRIS P1 BASIC

Gene TRBV27, Length 387 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27-201ENST00000390399 NPATQ14207 1427 aa13.86□□□□□ -0.19
TRBV27-201ENST00000390399 RNF17Q9BXT8 1623 aaKnown RBP13.86□□□□□ -0.19
TRBV27-201ENST00000390399 KIF15Q9NS87 1388 aa13.84□□□□□ -0.19
TRBV27-201ENST00000390399 SETD1BQ9UPS6 1966 aaKnown RBP13.83□□□□□ -0.19
TRBV27-201ENST00000390399 FAM50AQ14320 339 aaKnown RBP13.83□□□□□ -0.2
TRBV27-201ENST00000390399 PTPRKQ15262 1439 aa13.82□□□□□ -0.2
TRBV27-201ENST00000390399 MYO3AQ8NEV4 1616 aa13.82□□□□□ -0.2
TRBV27-201ENST00000390399 ZC3H13Q5T200 1668 aaKnown RBP13.82□□□□□ -0.2
TRBV27-201ENST00000390399 ERBINQ96RT1 1412 aa13.81□□□□□ -0.2
TRBV27-201ENST00000390399 RRP7BPQ9NSQ0 103 aa13.81□□□□□ -0.2
TRBV27-201ENST00000390399 MROH1Q8NDA8 1641 aa13.81□□□□□ -0.2
TRBV27-201ENST00000390399 WASHC2CQ9Y4E1 1318 aa13.81□□□□□ -0.2
TRBV27-201ENST00000390399 ANKRD30AQ9BXX3 1397 aa13.81□□□□□ -0.2
TRBV27-201ENST00000390399 PPARGC1BQ86YN6 1023 aaKnown RBP13.8□□□□□ -0.2
TRBV27-201ENST00000390399 CHIC2Q9UKJ5 165 aa13.8□□□□□ -0.2
TRBV27-201ENST00000390399 ADGRL2O95490 1459 aa13.8□□□□□ -0.2
TRBV27-201ENST00000390399 PZPP20742 1482 aa13.8□□□□□ -0.2
TRBV27-201ENST00000390399 ABCC3O15438 1527 aa13.8□□□□□ -0.2
TRBV27-201ENST00000390399 ZNF142P52746 1687 aaPredicted RBP13.79□□□□□ -0.2
TRBV27-201ENST00000390399 PRDM15P57071 1507 aaPredicted RBP13.79□□□□□ -0.2
TRBV27-201ENST00000390399 NCOA1Q15788 1441 aa13.78□□□□□ -0.2
TRBV27-201ENST00000390399 CEP152O94986 1710 aa13.78□□□□□ -0.2
TRBV27-201ENST00000390399 CEP170BQ9Y4F5 1589 aaPredicted RBP13.77□□□□□ -0.21
TRBV27-201ENST00000390399 STRCQ7RTU9 1775 aa13.76□□□□□ -0.21
TRBV27-201ENST00000390399 DEPDC5O75140 1603 aa13.76□□□□□ -0.21
TRBV27-201ENST00000390399 CAMSAP1Q5T5Y3 1602 aa13.75□□□□□ -0.21
TRBV27-201ENST00000390399 TNRQ92752 1358 aa13.75□□□□□ -0.21
TRBV27-201ENST00000390399 FBXO31Q5XUX0 539 aaPredicted RBP13.74□□□□□ -0.21
TRBV27-201ENST00000390399 A2ML1A8K2U0 1454 aa13.74□□□□□ -0.21
TRBV27-201ENST00000390399 KANK1Q14678 1352 aa13.72□□□□□ -0.21
TRBV27-201ENST00000390399 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.72□□□□□ -0.21
TRBV27-201ENST00000390399 SPATA31D1Q6ZQQ2 1576 aa13.72□□□□□ -0.21
TRBV27-201ENST00000390399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.71□□□□□ -0.21
TRBV27-201ENST00000390399 DMRT2Q9Y5R5 561 aa13.71□□□□□ -0.21
TRBV27-201ENST00000390399 ERVK-7P63135 1459 aa13.71□□□□□ -0.21
TRBV27-201ENST00000390399 ANKRD50Q9ULJ7 1429 aa13.71□□□□□ -0.22
TRBV27-201ENST00000390399 PLA2R1Q13018 1463 aa13.7□□□□□ -0.22
TRBV27-201ENST00000390399 NLRP1Q9C000 1473 aa13.7□□□□□ -0.22
TRBV27-201ENST00000390399 VWDEQ8N2E2 1590 aa13.7□□□□□ -0.22
TRBV27-201ENST00000390399 ROCK1Q13464 1354 aa13.7□□□□□ -0.22
TRBV27-201ENST00000390399 LMTK2Q8IWU2 1503 aa13.69□□□□□ -0.22
TRBV27-201ENST00000390399 ITGAEP38570 1179 aa13.69□□□□□ -0.22
TRBV27-201ENST00000390399 PTPRTO14522 1441 aa13.69□□□□□ -0.22
TRBV27-201ENST00000390399 ARHGAP31Q2M1Z3 1444 aa13.69□□□□□ -0.22
TRBV27-201ENST00000390399 RRBP1Q9P2E9 1410 aaKnown RBP13.69□□□□□ -0.22
TRBV27-201ENST00000390399 UGGT1Q9NYU2 1555 aa13.66□□□□□ -0.22
TRBV27-201ENST00000390399 EFCAB6Q5THR3 1501 aa13.66□□□□□ -0.22
TRBV27-201ENST00000390399 UNC13BO14795 1591 aa13.66□□□□□ -0.22
TRBV27-201ENST00000390399 NCKAP5LQ9HCH0 1330 aa13.65□□□□□ -0.22
TRBV27-201ENST00000390399 PKD2Q13563 968 aa13.65□□□□□ -0.22
TRBV27-201ENST00000390399 POLR1AO95602 1720 aaPredicted RBP13.64□□□□□ -0.23
TRBV27-201ENST00000390399 CFAP65Q6ZU64 1925 aaKnown RBP13.64□□□□□ -0.23
TRBV27-201ENST00000390399 TET3O43151 1660 aa13.63□□□□□ -0.23
TRBV27-201ENST00000390399 ILDR1Q86SU0 546 aaPredicted RBP13.62□□□□□ -0.23
TRBV27-201ENST00000390399 THEMISQ8N1K5 641 aaPredicted RBP13.62□□□□□ -0.23
TRBV27-201ENST00000390399 UBR1Q8IWV7 1749 aa13.61□□□□□ -0.23
TRBV27-201ENST00000390399 GCC2Q8IWJ2 1684 aa13.61□□□□□ -0.23
TRBV27-201ENST00000390399 NEURL4Q96JN8 1562 aa13.61□□□□□ -0.23
TRBV27-201ENST00000390399 SYNMO15061 1565 aa13.6□□□□□ -0.23
TRBV27-201ENST00000390399 IQGAP3Q86VI3 1631 aa13.6□□□□□ -0.23
TRBV27-201ENST00000390399 RPRD2Q5VT52 1461 aaKnown RBP13.6□□□□□ -0.23
TRBV27-201ENST00000390399 CERKQ8TCT0 537 aa13.59□□□□□ -0.23
TRBV27-201ENST00000390399 PIK3C2BO00750 1634 aa13.59□□□□□ -0.23
TRBV27-201ENST00000390399 NOS1P29475 1434 aa13.58□□□□□ -0.24
TRBV27-201ENST00000390399 ANKLE2Q86XL3 938 aa13.58□□□□□ -0.24
TRBV27-201ENST00000390399 FBXO41Q8TF61 875 aa13.58□□□□□ -0.24
TRBV27-201ENST00000390399 LTBP4Q8N2S1 1624 aa13.57□□□□□ -0.24
TRBV27-201ENST00000390399 KDM5AP29375 1690 aaKnown RBP13.56□□□□□ -0.24
TRBV27-201ENST00000390399 E9PCH4 1651 aa13.56□□□□□ -0.24
TRBV27-201ENST00000390399 NUP155O75694 1391 aa13.56□□□□□ -0.24
TRBV27-201ENST00000390399 NPHP4O75161 1426 aaPredicted RBP13.56□□□□□ -0.24
TRBV27-201ENST00000390399 NAIPQ13075 1403 aa13.56□□□□□ -0.24
TRBV27-201ENST00000390399 MED14O60244 1454 aa13.55□□□□□ -0.24
TRBV27-201ENST00000390399 ADGRB3O60242 1522 aa13.55□□□□□ -0.24
TRBV27-201ENST00000390399 SLIT1O75093 1534 aa13.55□□□□□ -0.24
TRBV27-201ENST00000390399 IQGAP1P46940 1657 aa13.55□□□□□ -0.24
TRBV27-201ENST00000390399 ZNF335Q9H4Z2 1342 aaPredicted RBP13.55□□□□□ -0.24
TRBV27-201ENST00000390399 ARHGAP23Q9P227 1491 aa13.55□□□□□ -0.24
TRBV27-201ENST00000390399 STAG3Q9UJ98 1225 aa13.54□□□□□ -0.24
TRBV27-201ENST00000390399 HFM1A2PYH4 1435 aa13.54□□□□□ -0.24
TRBV27-201ENST00000390399 IDI1Q13907 227 aa13.53□□□□□ -0.24
TRBV27-201ENST00000390399 SCAF11Q99590 1463 aaKnown RBP13.53□□□□□ -0.24
TRBV27-201ENST00000390399 SLC52A1Q9NWF4 448 aa13.52□□□□□ -0.25
TRBV27-201ENST00000390399 IQSEC2Q5JU85 1478 aa13.51□□□□□ -0.25
TRBV27-201ENST00000390399 TMEM2Q9UHN6 1383 aa13.51□□□□□ -0.25
TRBV27-201ENST00000390399 TXNDC2Q86VQ3 553 aa13.49□□□□□ -0.25
TRBV27-201ENST00000390399 EID1Q9Y6B2 187 aa13.49□□□□□ -0.25
TRBV27-201ENST00000390399 CPS1P31327 1500 aa13.49□□□□□ -0.25
TRBV27-201ENST00000390399 LTKP29376 864 aa13.48□□□□□ -0.25
TRBV27-201ENST00000390399 TMEM131LA2VDJ0 1609 aa13.48□□□□□ -0.25
TRBV27-201ENST00000390399 MYO5BQ9ULV0 1848 aa13.48□□□□□ -0.25
TRBV27-201ENST00000390399 SPHKAPQ2M3C7 1700 aa13.47□□□□□ -0.25
TRBV27-201ENST00000390399 TRIM52Q96A61 297 aa13.45□□□□□ -0.26
TRBV27-201ENST00000390399 CHGAP10645 457 aaKnown RBP13.44□□□□□ -0.26
TRBV27-201ENST00000390399 ZFYVE9O95405 1425 aa13.44□□□□□ -0.26
TRBV27-201ENST00000390399 RIMS2Q9UQ26 1411 aa13.43□□□□□ -0.26
TRBV27-201ENST00000390399 TRPM2O94759 1503 aa13.43□□□□□ -0.26
TRBV27-201ENST00000390399 STRCP1A6NGW2 1772 aa13.43□□□□□ -0.26
TRBV27-201ENST00000390399 PPP1R15AO75807 674 aaPredicted RBP13.41□□□□□ -0.26
TRBV27-201ENST00000390399 CLTCL1P53675 1640 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms