RNA–Protein interactions for RNA: ENST00000389378.6

TNIP1-202, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNIP1, Length 2,935 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-202ENST00000389378 RTN4Q9NQC3 1192 aaKnown RBP21.67■■□□□ 1.06
TNIP1-202ENST00000389378 TCERG1O14776 1098 aaKnown RBP21.67■■□□□ 1.06
TNIP1-202ENST00000389378 NEFMP07197 916 aa21.67■■□□□ 1.06
TNIP1-202ENST00000389378 NLRP13Q86W25 1043 aa21.67■■□□□ 1.06
TNIP1-202ENST00000389378 PLEKHD1A6NEE1 506 aa21.66■■□□□ 1.06
TNIP1-202ENST00000389378 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.66■■□□□ 1.061e-6■■■□□ 15.7
TNIP1-202ENST00000389378 KTN1Q86UP2 1357 aaKnown RBP21.64■■□□□ 1.05
TNIP1-202ENST00000389378 IL27Q8NEV9 243 aa21.64■■□□□ 1.05
TNIP1-202ENST00000389378 BACH2Q9BYV9 841 aa21.64■■□□□ 1.05
TNIP1-202ENST00000389378 UHRF1BP1Q6BDS2 1440 aa21.63■■□□□ 1.05
TNIP1-202ENST00000389378 CRBNQ96SW2 442 aa21.63■■□□□ 1.05
TNIP1-202ENST00000389378 C9orf84Q5VXU9 1444 aa21.61■■□□□ 1.05
TNIP1-202ENST00000389378 ADGRL2O95490 1459 aa21.6■■□□□ 1.05
TNIP1-202ENST00000389378 SLC4A3P48751 1232 aa21.59■■□□□ 1.05
TNIP1-202ENST00000389378 C20orf194Q5TEA3 1177 aa21.59■■□□□ 1.05
TNIP1-202ENST00000389378 ADGBQ8N7X0 1667 aa21.59■■□□□ 1.05
TNIP1-202ENST00000389378 GRIN2AQ12879 1464 aa21.58■■□□□ 1.05
TNIP1-202ENST00000389378 MRC2Q9UBG0 1479 aa21.58■■□□□ 1.05
TNIP1-202ENST00000389378 PANK3Q9H999 370 aa21.58■■□□□ 1.05
TNIP1-202ENST00000389378 PER1O15534 1290 aaPredicted RBP21.58■■□□□ 1.04
TNIP1-202ENST00000389378 JPH4Q96JJ6 628 aa21.58■■□□□ 1.04
TNIP1-202ENST00000389378 PARD3Q8TEW0 1356 aa21.55■■□□□ 1.04
TNIP1-202ENST00000389378 ITSN2Q9NZM3 1697 aa21.55■■□□□ 1.04
TNIP1-202ENST00000389378 PDE3BQ13370 1112 aa21.55■■□□□ 1.04
TNIP1-202ENST00000389378 DISP3Q9P2K9 1392 aa21.52■■□□□ 1.04
TNIP1-202ENST00000389378 ANO8Q9HCE9 1232 aaPredicted RBP21.52■■□□□ 1.03
TNIP1-202ENST00000389378 IFT140Q96RY7 1462 aa21.5■■□□□ 1.03
TNIP1-202ENST00000389378 MS4A1P11836 297 aa21.5■■□□□ 1.03
TNIP1-202ENST00000389378 ADAMTS8Q9UP79 889 aa21.5■■□□□ 1.03
TNIP1-202ENST00000389378 CROCC2H7BZ55 1655 aa21.5■■□□□ 1.03
TNIP1-202ENST00000389378 ARHGEF12Q9NZN5 1544 aa21.5■■□□□ 1.03
TNIP1-202ENST00000389378 CCDC144AA2RUR9 1427 aa21.49■■□□□ 1.03
TNIP1-202ENST00000389378 TESK2Q96S53 571 aa21.47■■□□□ 1.03
TNIP1-202ENST00000389378 PRAG1Q86YV5 1406 aa21.46■■□□□ 1.03
TNIP1-202ENST00000389378 CARMIL2Q6F5E8 1435 aa21.45■■□□□ 1.02
TNIP1-202ENST00000389378 MAGI1Q96QZ7 1491 aaPredicted RBP21.44■■□□□ 1.02
TNIP1-202ENST00000389378 CDC42BPAQ5VT25 1732 aa21.44■■□□□ 1.02
TNIP1-202ENST00000389378 CEP170Q5SW79 1584 aa21.43■■□□□ 1.02
TNIP1-202ENST00000389378 ATP10BO94823 1461 aa21.43■■□□□ 1.02
TNIP1-202ENST00000389378 RGS3P49796 1198 aa21.42■■□□□ 1.02
TNIP1-202ENST00000389378 PPM1GO15355 546 aaPredicted RBP21.42■■□□□ 1.02
TNIP1-202ENST00000389378 E9PCH4 1651 aa21.42■■□□□ 1.02
TNIP1-202ENST00000389378 TMF1P82094 1093 aa21.41■■□□□ 1.02
TNIP1-202ENST00000389378 EIF4G3O43432 1585 aaKnown RBP21.41■■□□□ 1.02
TNIP1-202ENST00000389378 KDM5DQ9BY66 1539 aa21.4■■□□□ 1.02
TNIP1-202ENST00000389378 DAXXQ9UER7 740 aaPredicted RBP21.4■■□□□ 1.02
TNIP1-202ENST00000389378 ABCC10Q5T3U5 1492 aa21.4■■□□□ 1.02
TNIP1-202ENST00000389378 FAM135AQ9P2D6 1515 aa21.4■■□□□ 1.02
TNIP1-202ENST00000389378 WDR43Q15061 677 aaKnown RBP eCLIP21.39■■□□□ 1.01
TNIP1-202ENST00000389378 ADCY10Q96PN6 1610 aa21.39■■□□□ 1.01
TNIP1-202ENST00000389378 CCDC146Q8IYE0 955 aa21.39■■□□□ 1.01
TNIP1-202ENST00000389378 PTPRGP23470 1445 aa21.38■■□□□ 1.01
TNIP1-202ENST00000389378 USP35Q9P2H5 1018 aa21.38■■□□□ 1.01
TNIP1-202ENST00000389378 ERBINQ96RT1 1412 aa21.37■■□□□ 1.01
TNIP1-202ENST00000389378 SHANK2Q9UPX8 1470 aa21.36■■□□□ 1.01
TNIP1-202ENST00000389378 NFKBIBQ15653 356 aa21.36■■□□□ 1.01
TNIP1-202ENST00000389378 DDRGK1Q96HY6 314 aa21.36■■□□□ 1.01
TNIP1-202ENST00000389378 BRPF3Q9ULD4 1205 aa21.36■■□□□ 1.01
TNIP1-202ENST00000389378 KNSTRNQ9Y448 316 aa21.36■■□□□ 1.01
TNIP1-202ENST00000389378 PLEKHH1Q9ULM0 1364 aa21.36■■□□□ 1.01
TNIP1-202ENST00000389378 A2MP01023 1474 aa21.36■■□□□ 1.01
TNIP1-202ENST00000389378 PLA2R1Q13018 1463 aa21.35■■□□□ 1.01
TNIP1-202ENST00000389378 BLMP54132 1417 aaPredicted RBP21.35■■□□□ 1.01
TNIP1-202ENST00000389378 DUSP27Q5VZP5 1158 aa21.35■■□□□ 1.01
TNIP1-202ENST00000389378 COL17A1Q9UMD9 1497 aaPredicted RBP21.35■■□□□ 1.01
TNIP1-202ENST00000389378 TRPM1Q7Z4N2 1603 aa21.34■■□□□ 1.01
TNIP1-202ENST00000389378 PPP2R1AP30153 589 aa21.34■■□□□ 1.01
TNIP1-202ENST00000389378 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.34■■□□□ 1.01
TNIP1-202ENST00000389378 KDM2BQ8NHM5 1336 aa21.32■■□□□ 1
TNIP1-202ENST00000389378 WASHC2CQ9Y4E1 1318 aa21.31■■□□□ 1
TNIP1-202ENST00000389378 SYNJ2O15056 1496 aa21.31■■□□□ 1
TNIP1-202ENST00000389378 GOLGA2Q08379 1002 aa21.31■■□□□ 1
TNIP1-202ENST00000389378 CENPQQ7L2Z9 268 aaPredicted RBP21.3■■□□□ 1
TNIP1-202ENST00000389378 CCDC141Q6ZP82 1450 aa21.29■■□□□ 1
TNIP1-202ENST00000389378 GSE1Q14687 1217 aa21.29■■□□□ 1
TNIP1-202ENST00000389378 SPINK5Q9NQ38 1064 aaPredicted RBP21.29■■□□□ 1
TNIP1-202ENST00000389378 GPRASP1Q5JY77 1395 aa21.29■■□□□ 1
TNIP1-202ENST00000389378 C8orf34Q49A92 452 aa21.28■■□□□ 1
TNIP1-202ENST00000389378 BCAR3O75815 825 aa21.28■■□□□ 1
TNIP1-202ENST00000389378 FAM161AQ3B820 660 aa21.28■■□□□ 1
TNIP1-202ENST00000389378 FRAT1Q92837 279 aaPredicted RBP21.28■■□□□ 1
TNIP1-202ENST00000389378 ABCA8O94911 1581 aa21.27■■□□□ 1
TNIP1-202ENST00000389378 PLEKHH2Q8IVE3 1493 aa21.27■■□□□ 1
TNIP1-202ENST00000389378 ZMYM4Q5VZL5 1548 aa21.27■■□□□ 1
TNIP1-202ENST00000389378 APAF1O14727 1248 aa21.26■□□□□ 0.99
TNIP1-202ENST00000389378 ERCC6Q03468 1493 aa21.26■□□□□ 0.99
TNIP1-202ENST00000389378 MAGI2Q86UL8 1455 aa21.25■□□□□ 0.99
TNIP1-202ENST00000389378 SAMD9LQ8IVG5 1584 aa21.25■□□□□ 0.99
TNIP1-202ENST00000389378 FRAT2O75474 233 aaPredicted RBP21.25■□□□□ 0.99
TNIP1-202ENST00000389378 AMER1Q5JTC6 1135 aaPredicted RBP21.24■□□□□ 0.99
TNIP1-202ENST00000389378 SYCP2Q9BX26 1530 aa21.23■□□□□ 0.99
TNIP1-202ENST00000389378 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.22■□□□□ 0.99
TNIP1-202ENST00000389378 PRDM15P57071 1507 aaPredicted RBP21.22■□□□□ 0.99
TNIP1-202ENST00000389378 SLFN5Q08AF3 891 aa21.21■□□□□ 0.99
TNIP1-202ENST00000389378 DMRT2Q9Y5R5 561 aa21.21■□□□□ 0.99
TNIP1-202ENST00000389378 NUP160Q12769 1436 aa21.21■□□□□ 0.99
TNIP1-202ENST00000389378 RSPH4AQ5TD94 716 aa21.2■□□□□ 0.98
TNIP1-202ENST00000389378 ARHGEF5Q12774 1597 aa21.19■□□□□ 0.98
TNIP1-202ENST00000389378 ARHGAP5Q13017 1502 aa21.18■□□□□ 0.98
TNIP1-202ENST00000389378 ZNF521Q96K83 1311 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms