RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 TNRQ92752 1358 aa34.56■■■■□ 3.12
CNEP1R1-201ENST00000389134 SCAF1Q9H7N4 1312 aaKnown RBP34.54■■■■□ 3.12
CNEP1R1-201ENST00000389134 NEURL4Q96JN8 1562 aa34.53■■■■□ 3.12
CNEP1R1-201ENST00000389134 EHBP1L1Q8N3D4 1523 aa34.53■■■■□ 3.12
CNEP1R1-201ENST00000389134 FAM135AQ9P2D6 1515 aa34.53■■■■□ 3.12
CNEP1R1-201ENST00000389134 SHANK2Q9UPX8 1470 aa34.52■■■■□ 3.12
CNEP1R1-201ENST00000389134 HSPA1LP34931 641 aa34.52■■■■□ 3.12
CNEP1R1-201ENST00000389134 KIF3BO15066 747 aa34.51■■■■□ 3.12
CNEP1R1-201ENST00000389134 FBXO31Q5XUX0 539 aaPredicted RBP34.51■■■■□ 3.12
CNEP1R1-201ENST00000389134 PZPP20742 1482 aa34.51■■■■□ 3.11
CNEP1R1-201ENST00000389134 PIP4K2BP78356 416 aa34.5■■■■□ 3.11
CNEP1R1-201ENST00000389134 KDM5DQ9BY66 1539 aa34.5■■■■□ 3.11
CNEP1R1-201ENST00000389134 CEP162Q5TB80 1403 aa34.48■■■■□ 3.11
CNEP1R1-201ENST00000389134 ANKLE2Q86XL3 938 aa34.48■■■■□ 3.11
CNEP1R1-201ENST00000389134 MED1Q15648 1581 aaPredicted RBP34.47■■■■□ 3.11
CNEP1R1-201ENST00000389134 RSPH4AQ5TD94 716 aa34.45■■■■□ 3.11
CNEP1R1-201ENST00000389134 THEMISQ8N1K5 641 aaPredicted RBP34.45■■■■□ 3.11
CNEP1R1-201ENST00000389134 WASHC2CQ9Y4E1 1318 aa34.45■■■■□ 3.11
CNEP1R1-201ENST00000389134 CCDC141Q6ZP82 1450 aa34.44■■■■□ 3.1
CNEP1R1-201ENST00000389134 NLRP1Q9C000 1473 aa34.41■■■■□ 3.1
CNEP1R1-201ENST00000389134 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.41■■■■□ 3.1
CNEP1R1-201ENST00000389134 MIA2Q96PC5 1412 aa34.4■■■■□ 3.1
CNEP1R1-201ENST00000389134 VWDEQ8N2E2 1590 aa34.4■■■■□ 3.1
CNEP1R1-201ENST00000389134 DEPDC5O75140 1603 aa34.39■■■■□ 3.1
CNEP1R1-201ENST00000389134 MED14O60244 1454 aa34.38■■■■□ 3.09
CNEP1R1-201ENST00000389134 UGGT1Q9NYU2 1555 aa34.37■■■■□ 3.09
CNEP1R1-201ENST00000389134 CAMSAP2Q08AD1 1489 aa34.36■■■■□ 3.09
CNEP1R1-201ENST00000389134 NPHP4O75161 1426 aaPredicted RBP34.35■■■■□ 3.09
CNEP1R1-201ENST00000389134 IQGAP1P46940 1657 aa34.31■■■■□ 3.08
CNEP1R1-201ENST00000389134 NCOA2Q15596 1464 aa34.3■■■■□ 3.08
CNEP1R1-201ENST00000389134 TSPY4P0CV99 314 aa34.29■■■■□ 3.08
CNEP1R1-201ENST00000389134 TSPY10P0CW01 314 aa34.29■■■■□ 3.08
CNEP1R1-201ENST00000389134 ARHGEF5Q12774 1597 aa34.28■■■■□ 3.08
CNEP1R1-201ENST00000389134 ALKQ9UM73 1620 aa34.27■■■■□ 3.08
CNEP1R1-201ENST00000389134 PHF23Q9BUL5 403 aaPredicted RBP34.26■■■■□ 3.08
CNEP1R1-201ENST00000389134 CFAP65Q6ZU64 1925 aaKnown RBP34.24■■■■□ 3.07
CNEP1R1-201ENST00000389134 STRCP1A6NGW2 1772 aa34.23■■■■□ 3.07
CNEP1R1-201ENST00000389134 ZC3H13Q5T200 1668 aaKnown RBP34.22■■■■□ 3.07
CNEP1R1-201ENST00000389134 RNF17Q9BXT8 1623 aaKnown RBP34.22■■■■□ 3.07
CNEP1R1-201ENST00000389134 LRRC7Q96NW7 1537 aa34.18■■■■□ 3.06
CNEP1R1-201ENST00000389134 SYNMO15061 1565 aa34.17■■■■□ 3.06
CNEP1R1-201ENST00000389134 ABCC3O15438 1527 aa34.17■■■■□ 3.06
CNEP1R1-201ENST00000389134 EIF2AK4Q9P2K8 1649 aaKnown RBP34.13■■■■□ 3.05
CNEP1R1-201ENST00000389134 MAST1Q9Y2H9 1570 aa34.13■■■■□ 3.05
CNEP1R1-201ENST00000389134 ERVK-7P63135 1459 aa34.13■■■■□ 3.05
CNEP1R1-201ENST00000389134 UBR1Q8IWV7 1749 aa34.1■■■■□ 3.05
CNEP1R1-201ENST00000389134 CEP152O94986 1710 aa34.07■■■■□ 3.04
CNEP1R1-201ENST00000389134 SENP3Q9H4L4 574 aaPredicted RBP34.05■■■■□ 3.04
CNEP1R1-201ENST00000389134 MROH1Q8NDA8 1641 aa34.04■■■■□ 3.04
CNEP1R1-201ENST00000389134 SCAF11Q99590 1463 aaKnown RBP34.03■■■■□ 3.04
CNEP1R1-201ENST00000389134 LRRC9Q6ZRR7 1453 aa33.99■■■■□ 3.03
CNEP1R1-201ENST00000389134 XIRP1Q702N8 1843 aaKnown RBP33.98■■■■□ 3.03
CNEP1R1-201ENST00000389134 TXNDC2Q86VQ3 553 aa33.97■■■■□ 3.03
CNEP1R1-201ENST00000389134 SLIT1O75093 1534 aa33.97■■■■□ 3.03
CNEP1R1-201ENST00000389134 ARHGAP23Q9P227 1491 aa33.96■■■■□ 3.03
CNEP1R1-201ENST00000389134 LTKP29376 864 aa33.96■■■■□ 3.03
CNEP1R1-201ENST00000389134 DUOX2Q9NRD8 1548 aa33.95■■■■□ 3.03
CNEP1R1-201ENST00000389134 EID1Q9Y6B2 187 aa33.92■■■■□ 3.02
CNEP1R1-201ENST00000389134 ARHGAP31Q2M1Z3 1444 aa33.92■■■■□ 3.02
CNEP1R1-201ENST00000389134 MYOM3Q5VTT5 1437 aa33.89■■■■□ 3.02
CNEP1R1-201ENST00000389134 RGS17Q9UGC6 210 aaPredicted RBP33.88■■■■□ 3.01
CNEP1R1-201ENST00000389134 VPS8Q8N3P4 1428 aa33.87■■■■□ 3.01
CNEP1R1-201ENST00000389134 PRDM15P57071 1507 aaPredicted RBP33.86■■■■□ 3.01
CNEP1R1-201ENST00000389134 FAM135BQ49AJ0 1406 aa33.84■■■■□ 3.01
CNEP1R1-201ENST00000389134 MAP3K1Q13233 1512 aa33.83■■■■□ 3.01
CNEP1R1-201ENST00000389134 PIK3C2BO00750 1634 aa33.82■■■■□ 3.01
CNEP1R1-201ENST00000389134 KIF15Q9NS87 1388 aa33.82■■■■□ 3
CNEP1R1-201ENST00000389134 TMEM2Q9UHN6 1383 aa33.81■■■■□ 3
CNEP1R1-201ENST00000389134 ERBINQ96RT1 1412 aa33.8■■■■□ 3
CNEP1R1-201ENST00000389134 KANK4Q5T7N3 995 aaPredicted RBP33.8■■■■□ 3
CNEP1R1-201ENST00000389134 KDM5AP29375 1690 aaKnown RBP33.8■■■■□ 3
CNEP1R1-201ENST00000389134 STAG3Q9UJ98 1225 aa33.79■■■■□ 3
CNEP1R1-201ENST00000389134 CROCC2H7BZ55 1655 aa33.77■■■■□ 3
CNEP1R1-201ENST00000389134 RRP7BPQ9NSQ0 103 aa33.75■■■□□ 2.99
CNEP1R1-201ENST00000389134 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.74■■■□□ 2.99
CNEP1R1-201ENST00000389134 TMEM94Q12767 1356 aa33.73■■■□□ 2.99
CNEP1R1-201ENST00000389134 KANK1Q14678 1352 aa33.73■■■□□ 2.99
CNEP1R1-201ENST00000389134 KCNA6P17658 529 aa33.73■■■□□ 2.99
CNEP1R1-201ENST00000389134 EFCAB6Q5THR3 1501 aa33.72■■■□□ 2.99
CNEP1R1-201ENST00000389134 ABCC5O15440 1437 aa33.7■■■□□ 2.99
CNEP1R1-201ENST00000389134 ROBO1Q9Y6N7 1651 aa33.7■■■□□ 2.99
CNEP1R1-201ENST00000389134 IDI1Q13907 227 aa33.68■■■□□ 2.98
CNEP1R1-201ENST00000389134 TET3O43151 1660 aa33.68■■■□□ 2.98
CNEP1R1-201ENST00000389134 PROSER2Q86WR7 435 aaPredicted RBP33.67■■■□□ 2.98
CNEP1R1-201ENST00000389134 POTEAQ6S8J7 498 aa33.66■■■□□ 2.98
CNEP1R1-201ENST00000389134 PTPN23Q9H3S7 1636 aa33.66■■■□□ 2.98
CNEP1R1-201ENST00000389134 LMTK2Q8IWU2 1503 aa33.65■■■□□ 2.98
CNEP1R1-201ENST00000389134 SLC26A8Q96RN1 970 aa33.63■■■□□ 2.97
CNEP1R1-201ENST00000389134 DAPK1P53355 1430 aa33.61■■■□□ 2.97
CNEP1R1-201ENST00000389134 NKTRP30414 1462 aaKnown RBP33.59■■■□□ 2.97
CNEP1R1-201ENST00000389134 NWD1Q149M9 1564 aa33.58■■■□□ 2.97
CNEP1R1-201ENST00000389134 RBM33Q96EV2 1170 aaKnown RBP33.57■■■□□ 2.96
CNEP1R1-201ENST00000389134 ADGRB3O60242 1522 aa33.56■■■□□ 2.96
CNEP1R1-201ENST00000389134 ANKRD30AQ9BXX3 1397 aa33.56■■■□□ 2.96
CNEP1R1-201ENST00000389134 NOS1P29475 1434 aa33.55■■■□□ 2.96
CNEP1R1-201ENST00000389134 MSH6P52701 1360 aa33.55■■■□□ 2.96
CNEP1R1-201ENST00000389134 LOC105371045A0A1W2PR82 267 aa33.54■■■□□ 2.96
CNEP1R1-201ENST00000389134 SLC52A1Q9NWF4 448 aa33.54■■■□□ 2.96
CNEP1R1-201ENST00000389134 PHLPP1O60346 1717 aa33.53■■■□□ 2.96
CNEP1R1-201ENST00000389134 BCANQ96GW7 911 aa33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms