RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 ZNF710Q8N1W2 664 aa10.84□□□□□ -0.67
RNU6-40P-201ENST00000384254 PARP9Q8IXQ6 854 aa10.83□□□□□ -0.68
RNU6-40P-201ENST00000384254 ZNF454Q8N9F8 522 aa10.83□□□□□ -0.68
RNU6-40P-201ENST00000384254 CERKQ8TCT0 537 aa10.83□□□□□ -0.68
RNU6-40P-201ENST00000384254 ZSWIM6Q9HCJ5 1215 aa10.83□□□□□ -0.68
RNU6-40P-201ENST00000384254 TSR1Q2NL82 804 aaKnown RBP10.82□□□□□ -0.68
RNU6-40P-201ENST00000384254 NUDT7P0C024 238 aa10.81□□□□□ -0.68
RNU6-40P-201ENST00000384254 FOSBP53539 338 aa10.81□□□□□ -0.68
RNU6-40P-201ENST00000384254 ZDHHC16Q969W1 377 aa10.81□□□□□ -0.68
RNU6-40P-201ENST00000384254 FAM117AQ9C073 453 aa10.8□□□□□ -0.68
RNU6-40P-201ENST00000384254 NPDC1Q9NQX5 325 aaPredicted RBP10.8□□□□□ -0.68
RNU6-40P-201ENST00000384254 ARSIQ5FYB1 569 aa10.79□□□□□ -0.68
RNU6-40P-201ENST00000384254 KDM4FA0A1W2PPD8 638 aa10.78□□□□□ -0.68
RNU6-40P-201ENST00000384254 CLCN1P35523 988 aa10.78□□□□□ -0.68
RNU6-40P-201ENST00000384254 C6orf132Q5T0Z8 1188 aa10.77□□□□□ -0.69
RNU6-40P-201ENST00000384254 GIGYF2Q6Y7W6 1299 aaKnown RBP10.77□□□□□ -0.69
RNU6-40P-201ENST00000384254 PSDA5PKW4 1024 aaPredicted RBP10.75□□□□□ -0.69
RNU6-40P-201ENST00000384254 OATP04181 439 aa10.75□□□□□ -0.69
RNU6-40P-201ENST00000384254 HOXB3P14651 431 aaPredicted RBP10.75□□□□□ -0.69
RNU6-40P-201ENST00000384254 KHSRPQ92945 711 aaKnown RBP eCLIP10.75□□□□□ -0.69
RNU6-40P-201ENST00000384254 SNPHO15079 494 aa10.74□□□□□ -0.69
RNU6-40P-201ENST00000384254 POTEJP0CG39 1038 aa10.74□□□□□ -0.69
RNU6-40P-201ENST00000384254 PPP4R3BQ5MIZ7 849 aa10.74□□□□□ -0.69
RNU6-40P-201ENST00000384254 GPCPD1Q9NPB8 672 aa10.74□□□□□ -0.69
RNU6-40P-201ENST00000384254 RBM27Q9P2N5 1060 aaKnown RBP10.74□□□□□ -0.69
RNU6-40P-201ENST00000384254 PADI6Q6TGC4 694 aa10.73□□□□□ -0.69
RNU6-40P-201ENST00000384254 MDM2Q00987 491 aaPredicted RBP10.72□□□□□ -0.69
RNU6-40P-201ENST00000384254 GPR153Q6NV75 609 aa10.72□□□□□ -0.69
RNU6-40P-201ENST00000384254 ADAM33Q9BZ11 813 aa10.72□□□□□ -0.69
RNU6-40P-201ENST00000384254 PLEKHG3A1L390 1219 aa10.71□□□□□ -0.69
RNU6-40P-201ENST00000384254 POTEB2H3BUK9 544 aa10.7□□□□□ -0.7
RNU6-40P-201ENST00000384254 METTL3Q86U44 580 aaKnown RBP10.69□□□□□ -0.7
RNU6-40P-201ENST00000384254 LHX6Q9UPM6 363 aa10.69□□□□□ -0.7
RNU6-40P-201ENST00000384254 MS4A1P11836 297 aa10.68□□□□□ -0.7
RNU6-40P-201ENST00000384254 PRSS12P56730 875 aa10.68□□□□□ -0.7
RNU6-40P-201ENST00000384254 RBM46Q8TBY0 533 aaKnown RBP10.68□□□□□ -0.7
RNU6-40P-201ENST00000384254 ADGRG1Q9Y653 693 aa10.68□□□□□ -0.7
RNU6-40P-201ENST00000384254 FAM161AQ3B820 660 aa10.67□□□□□ -0.7
RNU6-40P-201ENST00000384254 CDCA7LQ96GN5 454 aa10.67□□□□□ -0.7
RNU6-40P-201ENST00000384254 PCMTD1Q96MG8 357 aaPredicted RBP10.67□□□□□ -0.7
RNU6-40P-201ENST00000384254 GOPCQ9HD26 462 aa10.67□□□□□ -0.7
RNU6-40P-201ENST00000384254 PTPREP23469 700 aa10.66□□□□□ -0.7
RNU6-40P-201ENST00000384254 REPIN1Q9BWE0 567 aaKnown RBP10.66□□□□□ -0.7
RNU6-40P-201ENST00000384254 SSTR3P32745 418 aaPredicted RBP10.65□□□□□ -0.7
RNU6-40P-201ENST00000384254 PXYLP1Q8TE99 480 aa10.65□□□□□ -0.7
RNU6-40P-201ENST00000384254 KCNH8Q96L42 1107 aa10.65□□□□□ -0.7
RNU6-40P-201ENST00000384254 PHOX2BQ99453 314 aa10.65□□□□□ -0.7
RNU6-40P-201ENST00000384254 BCL2L12Q9HB09 334 aa10.65□□□□□ -0.7
RNU6-40P-201ENST00000384254 ATP1B4Q9UN42 357 aaPredicted RBP10.65□□□□□ -0.7
RNU6-40P-201ENST00000384254 TTC13Q8NBP0 860 aa10.64□□□□□ -0.71
RNU6-40P-201ENST00000384254 TMUB1Q9BVT8 246 aa10.64□□□□□ -0.71
RNU6-40P-201ENST00000384254 RSPH6AQ9H0K4 717 aa10.64□□□□□ -0.71
RNU6-40P-201ENST00000384254 PPP1R3GB7ZBB8 358 aa10.63□□□□□ -0.71
RNU6-40P-201ENST00000384254 FAM217BQ9NTX9 383 aaPredicted RBP10.62□□□□□ -0.71
RNU6-40P-201ENST00000384254 HOXB1P14653 301 aaPredicted RBP10.61□□□□□ -0.71
RNU6-40P-201ENST00000384254 BEGAINQ9BUH8 593 aa10.61□□□□□ -0.71
RNU6-40P-201ENST00000384254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.6□□□□□ -0.71
RNU6-40P-201ENST00000384254 NBPF26B4DH59 902 aa10.6□□□□□ -0.71
RNU6-40P-201ENST00000384254 SH3D19Q5HYK7 790 aa10.6□□□□□ -0.71
RNU6-40P-201ENST00000384254 NLRP7Q8WX94 980 aa10.6□□□□□ -0.71
RNU6-40P-201ENST00000384254 COL9A1P20849 921 aa10.59□□□□□ -0.71
RNU6-40P-201ENST00000384254 FLIIQ13045 1269 aa10.58□□□□□ -0.72
RNU6-40P-201ENST00000384254 PACS2Q86VP3 889 aa10.58□□□□□ -0.72
RNU6-40P-201ENST00000384254 DIXDC1Q155Q3 683 aa10.57□□□□□ -0.72
RNU6-40P-201ENST00000384254 SKIV2LQ15477 1246 aaKnown RBP10.56□□□□□ -0.72
RNU6-40P-201ENST00000384254 NUDT18Q6ZVK8 323 aa10.55□□□□□ -0.72
RNU6-40P-201ENST00000384254 SULF1Q8IWU6 871 aa10.55□□□□□ -0.72
RNU6-40P-201ENST00000384254 KCNK17Q96T54 332 aa10.55□□□□□ -0.72
RNU6-40P-201ENST00000384254 RCCD1A6NED2 376 aa10.54□□□□□ -0.72
RNU6-40P-201ENST00000384254 TRIM6-TRIM34B2RNG4 842 aa10.54□□□□□ -0.72
RNU6-40P-201ENST00000384254 DNAJB2P25686 324 aa10.54□□□□□ -0.72
RNU6-40P-201ENST00000384254 ZMYND15Q9H091 742 aa10.54□□□□□ -0.72
RNU6-40P-201ENST00000384254 TSKSQ9UJT2 592 aa10.54□□□□□ -0.72
RNU6-40P-201ENST00000384254 PNMA3Q9UL41 463 aa10.54□□□□□ -0.72
RNU6-40P-201ENST00000384254 SUPT5HO00267 1087 aaKnown RBP10.53□□□□□ -0.72
RNU6-40P-201ENST00000384254 TATDN2Q93075 761 aa10.52□□□□□ -0.73
RNU6-40P-201ENST00000384254 EYA1Q99502 592 aa10.52□□□□□ -0.73
RNU6-40P-201ENST00000384254 FAM198AQ9UFP1 575 aa10.52□□□□□ -0.73
RNU6-40P-201ENST00000384254 ONECUT3O60422 494 aaPredicted RBP10.5□□□□□ -0.73
RNU6-40P-201ENST00000384254 POLR3EQ9NVU0 708 aa10.5□□□□□ -0.73
RNU6-40P-201ENST00000384254 CLK2P49760 499 aaKnown RBP10.49□□□□□ -0.73
RNU6-40P-201ENST00000384254 DDX11L8A8MPP1 907 aa10.48□□□□□ -0.73
RNU6-40P-201ENST00000384254 MYSM1Q5VVJ2 828 aa10.48□□□□□ -0.73
RNU6-40P-201ENST00000384254 NUTM1Q86Y26 1132 aa10.48□□□□□ -0.73
RNU6-40P-201ENST00000384254 ARXQ96QS3 562 aa10.48□□□□□ -0.73
RNU6-40P-201ENST00000384254 TBC1D2Q9BYX2 928 aa10.48□□□□□ -0.73
RNU6-40P-201ENST00000384254 ERBB3P21860 1342 aa10.48□□□□□ -0.73
RNU6-40P-201ENST00000384254 PROX2Q3B8N5 592 aa10.47□□□□□ -0.73
RNU6-40P-201ENST00000384254 RSPH4AQ5TD94 716 aa10.47□□□□□ -0.73
RNU6-40P-201ENST00000384254 OTUD5Q96G74 571 aa10.47□□□□□ -0.73
RNU6-40P-201ENST00000384254 TMEM134Q9H6X4 195 aa10.47□□□□□ -0.73
RNU6-40P-201ENST00000384254 RDH13Q8NBN7 331 aa10.46□□□□□ -0.73
RNU6-40P-201ENST00000384254 CD46P15529 392 aa10.45□□□□□ -0.74
RNU6-40P-201ENST00000384254 SLC4A3P48751 1232 aa10.45□□□□□ -0.74
RNU6-40P-201ENST00000384254 SMAPO00193 183 aa10.44□□□□□ -0.74
RNU6-40P-201ENST00000384254 HDGFP51858 240 aaKnown RBP10.44□□□□□ -0.74
RNU6-40P-201ENST00000384254 VARS2Q5ST30 1063 aaKnown RBP10.44□□□□□ -0.74
RNU6-40P-201ENST00000384254 PROCA1Q8NCQ7 364 aaPredicted RBP10.44□□□□□ -0.74
RNU6-40P-201ENST00000384254 KIAA1468Q9P260 1216 aa10.44□□□□□ -0.74
RNU6-40P-201ENST00000384254 ARHGAP33O14559 1287 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms