RNA–Protein interactions for RNA: ENST00000382671.8

PSMD13-202, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 1 (best)

Gene PSMD13, Length 1,489 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-202ENST00000382671 PREX1Q8TCU6 1659 aa24.27■■□□□ 1.48
PSMD13-202ENST00000382671 ANKRD30AQ9BXX3 1397 aa24.27■■□□□ 1.48
PSMD13-202ENST00000382671 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.26■■□□□ 1.475e-6■■■□□ 14.8
PSMD13-202ENST00000382671 CHIC2Q9UKJ5 165 aa24.26■■□□□ 1.47
PSMD13-202ENST00000382671 NCOA1Q15788 1441 aa24.25■■□□□ 1.47
PSMD13-202ENST00000382671 ZMYM3Q14202 1370 aa24.25■■□□□ 1.47
PSMD13-202ENST00000382671 LMTK3Q96Q04 1460 aa24.25■■□□□ 1.47
PSMD13-202ENST00000382671 ERBINQ96RT1 1412 aa24.25■■□□□ 1.47
PSMD13-202ENST00000382671 RRP7BPQ9NSQ0 103 aa24.25■■□□□ 1.47
PSMD13-202ENST00000382671 KDM5DQ9BY66 1539 aa24.23■■□□□ 1.47
PSMD13-202ENST00000382671 MROH1Q8NDA8 1641 aa24.21■■□□□ 1.47
PSMD13-202ENST00000382671 ZC3H13Q5T200 1668 aaKnown RBP24.21■■□□□ 1.47
PSMD13-202ENST00000382671 PTPRKQ15262 1439 aa24.2■■□□□ 1.46
PSMD13-202ENST00000382671 RRBP1Q9P2E9 1410 aaKnown RBP24.2■■□□□ 1.46
PSMD13-202ENST00000382671 NPATQ14207 1427 aa24.19■■□□□ 1.46
PSMD13-202ENST00000382671 DEPDC5O75140 1603 aa24.19■■□□□ 1.46
PSMD13-202ENST00000382671 WASHC2CQ9Y4E1 1318 aa24.17■■□□□ 1.46
PSMD13-202ENST00000382671 CEP152O94986 1710 aa24.16■■□□□ 1.46
PSMD13-202ENST00000382671 PRDM15P57071 1507 aaPredicted RBP24.16■■□□□ 1.46
PSMD13-202ENST00000382671 UHRF1BP1Q6BDS2 1440 aa24.15■■□□□ 1.46
PSMD13-202ENST00000382671 ABCC3O15438 1527 aa24.15■■□□□ 1.46
PSMD13-202ENST00000382671 ROCK1Q13464 1354 aa24.14■■□□□ 1.46
PSMD13-202ENST00000382671 PZPP20742 1482 aa24.11■■□□□ 1.45
PSMD13-202ENST00000382671 CAMSAP1Q5T5Y3 1602 aa24.1■■□□□ 1.45
PSMD13-202ENST00000382671 ANKRD50Q9ULJ7 1429 aa24.1■■□□□ 1.45
PSMD13-202ENST00000382671 MYO3AQ8NEV4 1616 aa24.08■■□□□ 1.45
PSMD13-202ENST00000382671 ITGAEP38570 1179 aa24.08■■□□□ 1.45
PSMD13-202ENST00000382671 CFAP65Q6ZU64 1925 aaKnown RBP24.08■■□□□ 1.45
PSMD13-202ENST00000382671 ZNF142P52746 1687 aaPredicted RBP24.08■■□□□ 1.44
PSMD13-202ENST00000382671 HSPA2P54652 639 aa24.07■■□□□ 1.44
PSMD13-202ENST00000382671 VWDEQ8N2E2 1590 aa24.06■■□□□ 1.44
PSMD13-202ENST00000382671 KANK1Q14678 1352 aa24.05■■□□□ 1.44
PSMD13-202ENST00000382671 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.03■■□□□ 1.44
PSMD13-202ENST00000382671 LMTK2Q8IWU2 1503 aa24.02■■□□□ 1.44
PSMD13-202ENST00000382671 FBXO31Q5XUX0 539 aaPredicted RBP24.02■■□□□ 1.44
PSMD13-202ENST00000382671 UNC13BO14795 1591 aa24.02■■□□□ 1.44
PSMD13-202ENST00000382671 CEP170BQ9Y4F5 1589 aaPredicted RBP24.02■■□□□ 1.44
PSMD13-202ENST00000382671 ARHGAP31Q2M1Z3 1444 aa24.01■■□□□ 1.43
PSMD13-202ENST00000382671 TNRQ92752 1358 aa24.01■■□□□ 1.43
PSMD13-202ENST00000382671 SPATA31D1Q6ZQQ2 1576 aa24■■□□□ 1.43
PSMD13-202ENST00000382671 STRCQ7RTU9 1775 aa24■■□□□ 1.43
PSMD13-202ENST00000382671 GCC2Q8IWJ2 1684 aa23.97■■□□□ 1.43
PSMD13-202ENST00000382671 A2ML1A8K2U0 1454 aa23.97■■□□□ 1.43
PSMD13-202ENST00000382671 ERVK-7P63135 1459 aa23.97■■□□□ 1.43
PSMD13-202ENST00000382671 EFCAB6Q5THR3 1501 aa23.95■■□□□ 1.42
PSMD13-202ENST00000382671 NLRP1Q9C000 1473 aa23.94■■□□□ 1.42
PSMD13-202ENST00000382671 TET3O43151 1660 aa23.94■■□□□ 1.42
PSMD13-202ENST00000382671 IQGAP3Q86VI3 1631 aa23.92■■□□□ 1.42
PSMD13-202ENST00000382671 NAIPQ13075 1403 aa23.91■■□□□ 1.42
PSMD13-202ENST00000382671 HFM1A2PYH4 1435 aa23.88■■□□□ 1.41
PSMD13-202ENST00000382671 PLA2R1Q13018 1463 aa23.88■■□□□ 1.41
PSMD13-202ENST00000382671 RPRD2Q5VT52 1461 aaKnown RBP23.87■■□□□ 1.41
PSMD13-202ENST00000382671 UGGT1Q9NYU2 1555 aa23.86■■□□□ 1.41
PSMD13-202ENST00000382671 DMRT2Q9Y5R5 561 aa23.85■■□□□ 1.41
PSMD13-202ENST00000382671 E9PCH4 1651 aa23.85■■□□□ 1.41
PSMD13-202ENST00000382671 NUP155O75694 1391 aa23.84■■□□□ 1.41
PSMD13-202ENST00000382671 UBR1Q8IWV7 1749 aa23.84■■□□□ 1.41
PSMD13-202ENST00000382671 POLR1AO95602 1720 aaPredicted RBP23.83■■□□□ 1.41
PSMD13-202ENST00000382671 NOS1P29475 1434 aa23.83■■□□□ 1.41
PSMD13-202ENST00000382671 SYNMO15061 1565 aa23.83■■□□□ 1.4
PSMD13-202ENST00000382671 PTPRTO14522 1441 aa23.81■■□□□ 1.4
PSMD13-202ENST00000382671 THEMISQ8N1K5 641 aaPredicted RBP23.81■■□□□ 1.4
PSMD13-202ENST00000382671 KDM5AP29375 1690 aaKnown RBP23.8■■□□□ 1.4
PSMD13-202ENST00000382671 PIK3C2BO00750 1634 aa23.8■■□□□ 1.4
PSMD13-202ENST00000382671 PKD2Q13563 968 aa23.8■■□□□ 1.4
PSMD13-202ENST00000382671 NCKAP5LQ9HCH0 1330 aa23.77■■□□□ 1.4
PSMD13-202ENST00000382671 NEURL4Q96JN8 1562 aa23.74■■□□□ 1.39
PSMD13-202ENST00000382671 IDI1Q13907 227 aa23.73■■□□□ 1.39
PSMD13-202ENST00000382671 SLC52A1Q9NWF4 448 aa23.73■■□□□ 1.39
PSMD13-202ENST00000382671 ANKLE2Q86XL3 938 aa23.71■■□□□ 1.39
PSMD13-202ENST00000382671 SPHKAPQ2M3C7 1700 aa23.71■■□□□ 1.39
PSMD13-202ENST00000382671 MYO5BQ9ULV0 1848 aa23.71■■□□□ 1.39
PSMD13-202ENST00000382671 ADGRB3O60242 1522 aa23.7■■□□□ 1.38
PSMD13-202ENST00000382671 SLIT1O75093 1534 aa23.7■■□□□ 1.38
PSMD13-202ENST00000382671 ARHGAP23Q9P227 1491 aa23.69■■□□□ 1.38
PSMD13-202ENST00000382671 MED14O60244 1454 aa23.68■■□□□ 1.38
PSMD13-202ENST00000382671 TRIM52Q96A61 297 aa23.67■■□□□ 1.38
PSMD13-202ENST00000382671 STAG3Q9UJ98 1225 aa23.66■■□□□ 1.38
PSMD13-202ENST00000382671 IQGAP1P46940 1657 aa23.65■■□□□ 1.38
PSMD13-202ENST00000382671 TMEM131LA2VDJ0 1609 aa23.65■■□□□ 1.38
PSMD13-202ENST00000382671 SETD5Q9C0A6 1442 aa23.64■■□□□ 1.38
PSMD13-202ENST00000382671 TMEM2Q9UHN6 1383 aa23.63■■□□□ 1.37
PSMD13-202ENST00000382671 NPHP4O75161 1426 aaPredicted RBP23.63■■□□□ 1.37
PSMD13-202ENST00000382671 SCAF11Q99590 1463 aaKnown RBP23.63■■□□□ 1.37
PSMD13-202ENST00000382671 ACIN1Q9UKV3 1341 aaKnown RBP23.61■■□□□ 1.37
PSMD13-202ENST00000382671 LTBP4Q8N2S1 1624 aa23.6■■□□□ 1.37
PSMD13-202ENST00000382671 LTKP29376 864 aa23.59■■□□□ 1.37
PSMD13-202ENST00000382671 SLC4A1APQ9BWU0 796 aaKnown RBP23.59■■□□□ 1.37
PSMD13-202ENST00000382671 TRPM2O94759 1503 aa23.59■■□□□ 1.37
PSMD13-202ENST00000382671 TXNDC2Q86VQ3 553 aa23.58■■□□□ 1.37
PSMD13-202ENST00000382671 EID1Q9Y6B2 187 aa23.58■■□□□ 1.37
PSMD13-202ENST00000382671 CERKQ8TCT0 537 aa23.56■■□□□ 1.36
PSMD13-202ENST00000382671 CLTCL1P53675 1640 aa23.55■■□□□ 1.36
PSMD13-202ENST00000382671 KIF1BO60333 1816 aa23.55■■□□□ 1.36
PSMD13-202ENST00000382671 RAB3GAP2Q9H2M9 1393 aa23.55■■□□□ 1.36
PSMD13-202ENST00000382671 ZNF335Q9H4Z2 1342 aaPredicted RBP23.54■■□□□ 1.36
PSMD13-202ENST00000382671 ZFYVE9O95405 1425 aa23.54■■□□□ 1.36
PSMD13-202ENST00000382671 CHGAP10645 457 aaKnown RBP23.52■■□□□ 1.36
PSMD13-202ENST00000382671 RIMS2Q9UQ26 1411 aa23.5■■□□□ 1.35
PSMD13-202ENST00000382671 MPHOSPH9Q99550 1183 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms