RNA–Protein interactions for RNA: ENST00000381158.3

RAB3C-202, Transcript of RAB3C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB3C, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-202ENST00000381158 PTPRKQ15262 1439 aa14.4□□□□□ -0.1
RAB3C-202ENST00000381158 VPS8Q8N3P4 1428 aa14.4□□□□□ -0.1
RAB3C-202ENST00000381158 CCDC141Q6ZP82 1450 aa14.39□□□□□ -0.11
RAB3C-202ENST00000381158 LOC105371045A0A1W2PR82 267 aa14.39□□□□□ -0.11
RAB3C-202ENST00000381158 LRRC9Q6ZRR7 1453 aa14.38□□□□□ -0.11
RAB3C-202ENST00000381158 LTBP4Q8N2S1 1624 aa14.38□□□□□ -0.11
RAB3C-202ENST00000381158 CEP170BQ9Y4F5 1589 aaPredicted RBP14.38□□□□□ -0.11
RAB3C-202ENST00000381158 DHX29Q7Z478 1369 aaKnown RBP14.36□□□□□ -0.11
RAB3C-202ENST00000381158 GGT6Q6P531 493 aa14.36□□□□□ -0.11
RAB3C-202ENST00000381158 MAP3K1Q13233 1512 aa14.36□□□□□ -0.11
RAB3C-202ENST00000381158 MAST1Q9Y2H9 1570 aa14.34□□□□□ -0.11
RAB3C-202ENST00000381158 FAM135AQ9P2D6 1515 aa14.34□□□□□ -0.11
RAB3C-202ENST00000381158 DNMT1P26358 1616 aaKnown RBP14.33□□□□□ -0.11
RAB3C-202ENST00000381158 PLA2R1Q13018 1463 aa14.33□□□□□ -0.12
RAB3C-202ENST00000381158 RNF17Q9BXT8 1623 aaKnown RBP14.33□□□□□ -0.12
RAB3C-202ENST00000381158 POLR1AO95602 1720 aaPredicted RBP14.32□□□□□ -0.12
RAB3C-202ENST00000381158 KDM5DQ9BY66 1539 aa14.32□□□□□ -0.12
RAB3C-202ENST00000381158 RSPH4AQ5TD94 716 aa14.32□□□□□ -0.12
RAB3C-202ENST00000381158 TCOF1Q13428 1488 aaKnown RBP14.31□□□□□ -0.12
RAB3C-202ENST00000381158 KANK4Q5T7N3 995 aaPredicted RBP14.31□□□□□ -0.12
RAB3C-202ENST00000381158 A2ML1A8K2U0 1454 aa14.3□□□□□ -0.12
RAB3C-202ENST00000381158 PZPP20742 1482 aa14.3□□□□□ -0.12
RAB3C-202ENST00000381158 EIF2AK4Q9P2K8 1649 aaKnown RBP14.3□□□□□ -0.12
RAB3C-202ENST00000381158 CROCC2H7BZ55 1655 aa14.3□□□□□ -0.12
RAB3C-202ENST00000381158 KIF3BO15066 747 aa14.29□□□□□ -0.12
RAB3C-202ENST00000381158 NCKAP5LQ9HCH0 1330 aa14.29□□□□□ -0.12
RAB3C-202ENST00000381158 ZC3H13Q5T200 1668 aaKnown RBP14.29□□□□□ -0.12
RAB3C-202ENST00000381158 CEP152O94986 1710 aa14.28□□□□□ -0.12
RAB3C-202ENST00000381158 IQSEC2Q5JU85 1478 aa14.28□□□□□ -0.12
RAB3C-202ENST00000381158 MROH1Q8NDA8 1641 aa14.28□□□□□ -0.12
RAB3C-202ENST00000381158 NEURL4Q96JN8 1562 aa14.27□□□□□ -0.12
RAB3C-202ENST00000381158 MYOM3Q5VTT5 1437 aa14.27□□□□□ -0.12
RAB3C-202ENST00000381158 CFAP65Q6ZU64 1925 aaKnown RBP14.27□□□□□ -0.13
RAB3C-202ENST00000381158 MIA2Q96PC5 1412 aa14.26□□□□□ -0.13
RAB3C-202ENST00000381158 FBXO31Q5XUX0 539 aaPredicted RBP14.26□□□□□ -0.13
RAB3C-202ENST00000381158 PKD2Q13563 968 aa14.25□□□□□ -0.13
RAB3C-202ENST00000381158 ABCC3O15438 1527 aa14.25□□□□□ -0.13
RAB3C-202ENST00000381158 TNRQ92752 1358 aa14.24□□□□□ -0.13
RAB3C-202ENST00000381158 PTPN23Q9H3S7 1636 aa14.24□□□□□ -0.13
RAB3C-202ENST00000381158 TSPY4P0CV99 314 aa14.24□□□□□ -0.13
RAB3C-202ENST00000381158 TSPY10P0CW01 314 aa14.24□□□□□ -0.13
RAB3C-202ENST00000381158 ZNF335Q9H4Z2 1342 aaPredicted RBP14.23□□□□□ -0.13
RAB3C-202ENST00000381158 SPATA31D1Q6ZQQ2 1576 aa14.22□□□□□ -0.13
RAB3C-202ENST00000381158 WASHC2CQ9Y4E1 1318 aa14.22□□□□□ -0.13
RAB3C-202ENST00000381158 DUOX2Q9NRD8 1548 aa14.2□□□□□ -0.14
RAB3C-202ENST00000381158 NLRP1Q9C000 1473 aa14.2□□□□□ -0.14
RAB3C-202ENST00000381158 DEPDC5O75140 1603 aa14.2□□□□□ -0.14
RAB3C-202ENST00000381158 SHANK2Q9UPX8 1470 aa14.19□□□□□ -0.14
RAB3C-202ENST00000381158 UGGT1Q9NYU2 1555 aa14.19□□□□□ -0.14
RAB3C-202ENST00000381158 UBR1Q8IWV7 1749 aa14.18□□□□□ -0.14
RAB3C-202ENST00000381158 ABCC5O15440 1437 aa14.18□□□□□ -0.14
RAB3C-202ENST00000381158 PRDM15P57071 1507 aaPredicted RBP14.18□□□□□ -0.14
RAB3C-202ENST00000381158 ERVK-7P63135 1459 aa14.18□□□□□ -0.14
RAB3C-202ENST00000381158 IQGAP1P46940 1657 aa14.17□□□□□ -0.14
RAB3C-202ENST00000381158 STRCP1A6NGW2 1772 aa14.17□□□□□ -0.14
RAB3C-202ENST00000381158 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.17□□□□□ -0.14
RAB3C-202ENST00000381158 VWDEQ8N2E2 1590 aa14.17□□□□□ -0.14
RAB3C-202ENST00000381158 MED14O60244 1454 aa14.16□□□□□ -0.14
RAB3C-202ENST00000381158 DAPK1P53355 1430 aa14.15□□□□□ -0.14
RAB3C-202ENST00000381158 FGD6Q6ZV73 1430 aa14.15□□□□□ -0.14
RAB3C-202ENST00000381158 KIF15Q9NS87 1388 aa14.14□□□□□ -0.15
RAB3C-202ENST00000381158 ERBINQ96RT1 1412 aa14.14□□□□□ -0.15
RAB3C-202ENST00000381158 DCAF8L1A6NGE4 600 aa14.13□□□□□ -0.15
RAB3C-202ENST00000381158 CPS1P31327 1500 aa14.13□□□□□ -0.15
RAB3C-202ENST00000381158 THEMISQ8N1K5 641 aaPredicted RBP14.12□□□□□ -0.15
RAB3C-202ENST00000381158 NPHP4O75161 1426 aaPredicted RBP14.11□□□□□ -0.15
RAB3C-202ENST00000381158 ARHGAP31Q2M1Z3 1444 aa14.11□□□□□ -0.15
RAB3C-202ENST00000381158 ANKLE2Q86XL3 938 aa14.11□□□□□ -0.15
RAB3C-202ENST00000381158 PIK3C2BO00750 1634 aa14.11□□□□□ -0.15
RAB3C-202ENST00000381158 APLP2Q06481 763 aa14.1□□□□□ -0.15
RAB3C-202ENST00000381158 ALKQ9UM73 1620 aa14.1□□□□□ -0.15
RAB3C-202ENST00000381158 UBAP1LF5GYI3 381 aa14.09□□□□□ -0.15
RAB3C-202ENST00000381158 POTEDQ86YR6 584 aa14.09□□□□□ -0.15
RAB3C-202ENST00000381158 RRP7BPQ9NSQ0 103 aa14.09□□□□□ -0.15
RAB3C-202ENST00000381158 KDM5AP29375 1690 aaKnown RBP14.09□□□□□ -0.15
RAB3C-202ENST00000381158 DISP3Q9P2K9 1392 aa14.09□□□□□ -0.15
RAB3C-202ENST00000381158 XIRP1Q702N8 1843 aaKnown RBP14.08□□□□□ -0.15
RAB3C-202ENST00000381158 SLIT1O75093 1534 aa14.08□□□□□ -0.16
RAB3C-202ENST00000381158 LMTK2Q8IWU2 1503 aa14.08□□□□□ -0.16
RAB3C-202ENST00000381158 ARHGAP23Q9P227 1491 aa14.07□□□□□ -0.16
RAB3C-202ENST00000381158 ADGRL2O95490 1459 aa14.06□□□□□ -0.16
RAB3C-202ENST00000381158 SYNMO15061 1565 aa14.06□□□□□ -0.16
RAB3C-202ENST00000381158 ILDR2Q71H61 639 aa14.06□□□□□ -0.16
RAB3C-202ENST00000381158 MYO5BQ9ULV0 1848 aa14.05□□□□□ -0.16
RAB3C-202ENST00000381158 ANKRD30AQ9BXX3 1397 aa14.05□□□□□ -0.16
RAB3C-202ENST00000381158 CHIC2Q9UKJ5 165 aa14.04□□□□□ -0.16
RAB3C-202ENST00000381158 SCAF11Q99590 1463 aaKnown RBP14.04□□□□□ -0.16
RAB3C-202ENST00000381158 EFCAB6Q5THR3 1501 aa14.04□□□□□ -0.16
RAB3C-202ENST00000381158 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.03□□□□□ -0.16
RAB3C-202ENST00000381158 LRRC7Q96NW7 1537 aa14.03□□□□□ -0.16
RAB3C-202ENST00000381158 LTKP29376 864 aa14.02□□□□□ -0.17
RAB3C-202ENST00000381158 GCC2Q8IWJ2 1684 aa14.01□□□□□ -0.17
RAB3C-202ENST00000381158 KANK1Q14678 1352 aa14.01□□□□□ -0.17
RAB3C-202ENST00000381158 TET3O43151 1660 aa14.01□□□□□ -0.17
RAB3C-202ENST00000381158 NOS1P29475 1434 aa14□□□□□ -0.17
RAB3C-202ENST00000381158 UNC13BO14795 1591 aa14□□□□□ -0.17
RAB3C-202ENST00000381158 TOM1O60784 492 aa13.98□□□□□ -0.17
RAB3C-202ENST00000381158 ADGRB3O60242 1522 aa13.98□□□□□ -0.17
RAB3C-202ENST00000381158 TMEM2Q9UHN6 1383 aa13.97□□□□□ -0.17
RAB3C-202ENST00000381158 HSPA1LP34931 641 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms