RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 HNRNPUQ00839 825 aaKnown RBP eCLIP17.41■□□□□ 0.38
PUDP-201ENST00000381077 FKBP8Q14318 412 aa17.41■□□□□ 0.38
PUDP-201ENST00000381077 CCDC144AA2RUR9 1427 aa17.4■□□□□ 0.38
PUDP-201ENST00000381077 ABCC1P33527 1531 aa17.4■□□□□ 0.38
PUDP-201ENST00000381077 DHX29Q7Z478 1369 aaKnown RBP17.39■□□□□ 0.37
PUDP-201ENST00000381077 RTEL1-TNFRSF6BF6WH68 1400 aa17.39■□□□□ 0.37
PUDP-201ENST00000381077 EIF2AK4Q9P2K8 1649 aaKnown RBP17.38■□□□□ 0.37
PUDP-201ENST00000381077 EFCAB2Q5VUJ9 269 aa17.38■□□□□ 0.37
PUDP-201ENST00000381077 ZBED9Q6R2W3 1325 aa17.37■□□□□ 0.37
PUDP-201ENST00000381077 TRPM1Q7Z4N2 1603 aa17.37■□□□□ 0.37
PUDP-201ENST00000381077 MYT1Q01538 1121 aa17.37■□□□□ 0.37
PUDP-201ENST00000381077 GPRASP1Q5JY77 1395 aa17.37■□□□□ 0.37
PUDP-201ENST00000381077 CARD11Q9BXL7 1154 aa17.36■□□□□ 0.37
PUDP-201ENST00000381077 PRAG1Q86YV5 1406 aa17.36■□□□□ 0.37
PUDP-201ENST00000381077 MRS2Q9HD23 443 aa17.35■□□□□ 0.37
PUDP-201ENST00000381077 E9PCH4 1651 aa17.33■□□□□ 0.37
PUDP-201ENST00000381077 PLA2R1Q13018 1463 aa17.33■□□□□ 0.36
PUDP-201ENST00000381077 STAC3Q96MF2 364 aa17.31■□□□□ 0.36
PUDP-201ENST00000381077 DCAF11Q8TEB1 546 aa17.3■□□□□ 0.36
PUDP-201ENST00000381077 WDR7Q9Y4E6 1490 aa17.3■□□□□ 0.36
PUDP-201ENST00000381077 ZNF326Q5BKZ1 582 aaKnown RBP17.29■□□□□ 0.36
PUDP-201ENST00000381077 A2MP01023 1474 aa17.29■□□□□ 0.36
PUDP-201ENST00000381077 PRDM15P57071 1507 aaPredicted RBP17.29■□□□□ 0.36
PUDP-201ENST00000381077 TSHZ2Q9NRE2 1034 aa17.28■□□□□ 0.36
PUDP-201ENST00000381077 DEPDC5O75140 1603 aa17.28■□□□□ 0.36
PUDP-201ENST00000381077 NEURL4Q96JN8 1562 aa17.28■□□□□ 0.36
PUDP-201ENST00000381077 CCDC184Q52MB2 194 aa17.27■□□□□ 0.35
PUDP-201ENST00000381077 ABCA9Q8IUA7 1624 aa17.27■□□□□ 0.35
PUDP-201ENST00000381077 ZFYVE16Q7Z3T8 1539 aa17.27■□□□□ 0.35
PUDP-201ENST00000381077 RALBP1Q15311 655 aa17.26■□□□□ 0.35
PUDP-201ENST00000381077 WASHC2CQ9Y4E1 1318 aa17.25■□□□□ 0.35
PUDP-201ENST00000381077 RNF17Q9BXT8 1623 aaKnown RBP17.24■□□□□ 0.35
PUDP-201ENST00000381077 ST20-MTHFSA0A0A6YYL1 179 aa17.24■□□□□ 0.35
PUDP-201ENST00000381077 TRAPPC8Q9Y2L5 1435 aa17.24■□□□□ 0.35
PUDP-201ENST00000381077 BRD4O60885 1362 aaPredicted RBP17.24■□□□□ 0.35
PUDP-201ENST00000381077 TRPM2O94759 1503 aa17.24■□□□□ 0.35
PUDP-201ENST00000381077 INO80Q9ULG1 1556 aaPredicted RBP17.23■□□□□ 0.35
PUDP-201ENST00000381077 FAM9BQ8IZU0 186 aa17.23■□□□□ 0.35
PUDP-201ENST00000381077 COL17A1Q9UMD9 1497 aaPredicted RBP17.22■□□□□ 0.35
PUDP-201ENST00000381077 KDM2AQ9Y2K7 1162 aa17.22■□□□□ 0.35
PUDP-201ENST00000381077 SPAG9O60271 1321 aaKnown RBP17.22■□□□□ 0.35
PUDP-201ENST00000381077 PTPRTO14522 1441 aa17.22■□□□□ 0.35
PUDP-201ENST00000381077 VWDEQ8N2E2 1590 aa17.21■□□□□ 0.35
PUDP-201ENST00000381077 TET3O43151 1660 aa17.21■□□□□ 0.35
PUDP-201ENST00000381077 SMG6Q86US8 1419 aaKnown RBP17.21■□□□□ 0.35
PUDP-201ENST00000381077 INSRP06213 1382 aa17.21■□□□□ 0.35
PUDP-201ENST00000381077 ZMYM4Q5VZL5 1548 aa17.2■□□□□ 0.34
PUDP-201ENST00000381077 MYBBP1AQ9BQG0 1328 aaKnown RBP17.2■□□□□ 0.34
PUDP-201ENST00000381077 CEP152O94986 1710 aa17.2■□□□□ 0.34
PUDP-201ENST00000381077 BCANQ96GW7 911 aa17.2■□□□□ 0.34
PUDP-201ENST00000381077 ATP7AQ04656 1500 aa17.19■□□□□ 0.34
PUDP-201ENST00000381077 LRPPRCP42704 1394 aaKnown RBP17.19■□□□□ 0.34
PUDP-201ENST00000381077 SPHKAPQ2M3C7 1700 aa17.18■□□□□ 0.34
PUDP-201ENST00000381077 FANCAO15360 1455 aa17.18■□□□□ 0.34
PUDP-201ENST00000381077 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.17■□□□□ 0.34
PUDP-201ENST00000381077 PNISRQ8TF01 805 aaKnown RBP17.17■□□□□ 0.34
PUDP-201ENST00000381077 KANK1Q14678 1352 aa17.16■□□□□ 0.34
PUDP-201ENST00000381077 PARD3Q8TEW0 1356 aa17.16■□□□□ 0.34
PUDP-201ENST00000381077 SCAPERQ9BY12 1400 aa17.16■□□□□ 0.34
PUDP-201ENST00000381077 MADDQ8WXG6 1647 aa17.15■□□□□ 0.34
PUDP-201ENST00000381077 PPP4R2Q9NY27 417 aa17.15■□□□□ 0.34
PUDP-201ENST00000381077 KIAA1210Q9ULL0 1709 aa17.15■□□□□ 0.34
PUDP-201ENST00000381077 TMC1Q8TDI8 760 aa17.15■□□□□ 0.34
PUDP-201ENST00000381077 POLR3GLQ9BT43 218 aa17.13■□□□□ 0.33
PUDP-201ENST00000381077 IQGAP1P46940 1657 aa17.13■□□□□ 0.33
PUDP-201ENST00000381077 CFAP74Q9C0B2 1584 aa17.13■□□□□ 0.33
PUDP-201ENST00000381077 TESK2Q96S53 571 aa17.12■□□□□ 0.33
PUDP-201ENST00000381077 NUDCQ9Y266 331 aa17.12■□□□□ 0.33
PUDP-201ENST00000381077 RNF123Q5XPI4 1314 aa17.12■□□□□ 0.33
PUDP-201ENST00000381077 SLC24A1O60721 1099 aa17.12■□□□□ 0.33
PUDP-201ENST00000381077 TMF1P82094 1093 aa17.12■□□□□ 0.33
PUDP-201ENST00000381077 NLRP13Q86W25 1043 aa17.12■□□□□ 0.33
PUDP-201ENST00000381077 ADGRL1O94910 1474 aa17.12■□□□□ 0.33
PUDP-201ENST00000381077 RGL3Q3MIN7 710 aa17.11■□□□□ 0.33
PUDP-201ENST00000381077 LMTK2Q8IWU2 1503 aa17.11■□□□□ 0.33
PUDP-201ENST00000381077 PER1O15534 1290 aaPredicted RBP17.09■□□□□ 0.33
PUDP-201ENST00000381077 NBPF1Q3BBV0 1214 aa17.09■□□□□ 0.33
PUDP-201ENST00000381077 CLTCL1P53675 1640 aa17.09■□□□□ 0.33
PUDP-201ENST00000381077 ASXL2Q76L83 1435 aa17.08■□□□□ 0.33
PUDP-201ENST00000381077 CDCA8Q53HL2 280 aa17.08■□□□□ 0.32
PUDP-201ENST00000381077 AFAP1Q8N556 730 aa17.08■□□□□ 0.32
PUDP-201ENST00000381077 MROH1Q8NDA8 1641 aa17.07■□□□□ 0.32
PUDP-201ENST00000381077 MYOM2P54296 1465 aa17.07■□□□□ 0.32
PUDP-201ENST00000381077 ZNF518AQ6AHZ1 1483 aa17.07■□□□□ 0.32
PUDP-201ENST00000381077 SCAF11Q99590 1463 aaKnown RBP17.07■□□□□ 0.32
PUDP-201ENST00000381077 PDE3BQ13370 1112 aa17.05■□□□□ 0.32
PUDP-201ENST00000381077 EFCAB6Q5THR3 1501 aa17.05■□□□□ 0.32
PUDP-201ENST00000381077 SYNMO15061 1565 aa17.05■□□□□ 0.32
PUDP-201ENST00000381077 EIF3AQ14152 1382 aaKnown RBP17.05■□□□□ 0.32
PUDP-201ENST00000381077 DISP3Q9P2K9 1392 aa17.05■□□□□ 0.32
PUDP-201ENST00000381077 KIDINS220Q9ULH0 1771 aa17.04■□□□□ 0.32
PUDP-201ENST00000381077 KIF1BO60333 1816 aa17.01■□□□□ 0.31
PUDP-201ENST00000381077 RBM19Q9Y4C8 960 aaKnown RBP17.01■□□□□ 0.31
PUDP-201ENST00000381077 MAP3K4Q9Y6R4 1608 aa17.01■□□□□ 0.31
PUDP-201ENST00000381077 NPC1L1Q9UHC9 1359 aa17.01■□□□□ 0.31
PUDP-201ENST00000381077 MLH3Q9UHC1 1453 aa17.01■□□□□ 0.31
PUDP-201ENST00000381077 IFT172Q9UG01 1749 aa17■□□□□ 0.31
PUDP-201ENST00000381077 BLMP54132 1417 aaPredicted RBP16.99■□□□□ 0.31
PUDP-201ENST00000381077 NRXN1Q9ULB1 1477 aa16.98■□□□□ 0.31
PUDP-201ENST00000381077 KIF3BO15066 747 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms