RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 TSPY4P0CV99 314 aa36.7■■■■□ 3.47
U2AF1-202ENST00000380276 TSPY10P0CW01 314 aa36.7■■■■□ 3.47
U2AF1-202ENST00000380276 TNRQ92752 1358 aa36.69■■■■□ 3.46
U2AF1-202ENST00000380276 WASHC2CQ9Y4E1 1318 aa36.69■■■■□ 3.46
U2AF1-202ENST00000380276 FBXO31Q5XUX0 539 aaPredicted RBP36.69■■■■□ 3.46
U2AF1-202ENST00000380276 DNMT1P26358 1616 aaKnown RBP36.69■■■■□ 3.46
U2AF1-202ENST00000380276 VPS8Q8N3P4 1428 aa36.67■■■■□ 3.46
U2AF1-202ENST00000380276 ARHGEF5Q12774 1597 aa36.66■■■■□ 3.46
U2AF1-202ENST00000380276 LOC105371045A0A1W2PR82 267 aa36.66■■■■□ 3.46
U2AF1-202ENST00000380276 LRRC9Q6ZRR7 1453 aa36.64■■■■□ 3.46
U2AF1-202ENST00000380276 UBAP1LF5GYI3 381 aa36.64■■■■□ 3.46
U2AF1-202ENST00000380276 PZPP20742 1482 aa36.63■■■■□ 3.45
U2AF1-202ENST00000380276 FAM135AQ9P2D6 1515 aa36.63■■■■□ 3.45
U2AF1-202ENST00000380276 SPATA31D1Q6ZQQ2 1576 aa36.6■■■■□ 3.45
U2AF1-202ENST00000380276 POLR1AO95602 1720 aaPredicted RBP36.58■■■■□ 3.45
U2AF1-202ENST00000380276 ILDR2Q71H61 639 aa36.54■■■■□ 3.44
U2AF1-202ENST00000380276 KANK4Q5T7N3 995 aaPredicted RBP36.5■■■■□ 3.43
U2AF1-202ENST00000380276 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.5■■■■□ 3.431e-7■■■■■ 38.4
U2AF1-202ENST00000380276 MIA2Q96PC5 1412 aa36.5■■■■□ 3.43
U2AF1-202ENST00000380276 MAST1Q9Y2H9 1570 aa36.49■■■■□ 3.43
U2AF1-202ENST00000380276 NEURL4Q96JN8 1562 aa36.49■■■■□ 3.43
U2AF1-202ENST00000380276 ANKLE2Q86XL3 938 aa36.47■■■■□ 3.43
U2AF1-202ENST00000380276 THEMISQ8N1K5 641 aaPredicted RBP36.47■■■■□ 3.43
U2AF1-202ENST00000380276 NLRP1Q9C000 1473 aa36.47■■■■□ 3.43
U2AF1-202ENST00000380276 UGGT1Q9NYU2 1555 aa36.46■■■■□ 3.43
U2AF1-202ENST00000380276 RNF17Q9BXT8 1623 aaKnown RBP36.45■■■■□ 3.43
U2AF1-202ENST00000380276 SCAF1Q9H7N4 1312 aaKnown RBP36.45■■■■□ 3.43
U2AF1-202ENST00000380276 MYOM3Q5VTT5 1437 aa36.44■■■■□ 3.42
U2AF1-202ENST00000380276 MAP3K1Q13233 1512 aa36.43■■■■□ 3.42
U2AF1-202ENST00000380276 ZC3H13Q5T200 1668 aaKnown RBP36.42■■■■□ 3.42
U2AF1-202ENST00000380276 ABCC3O15438 1527 aa36.42■■■■□ 3.42
U2AF1-202ENST00000380276 EIF2AK4Q9P2K8 1649 aaKnown RBP36.41■■■■□ 3.42
U2AF1-202ENST00000380276 SHANK2Q9UPX8 1470 aa36.39■■■■□ 3.42
U2AF1-202ENST00000380276 CPS1P31327 1500 aa36.39■■■■□ 3.42
U2AF1-202ENST00000380276 NPHP4O75161 1426 aaPredicted RBP36.36■■■■□ 3.41
U2AF1-202ENST00000380276 PIP4K2BP78356 416 aa36.36■■■■□ 3.41
U2AF1-202ENST00000380276 CEP152O94986 1710 aa36.35■■■■□ 3.41
U2AF1-202ENST00000380276 SOCS7O14512 581 aa36.34■■■■□ 3.41
U2AF1-202ENST00000380276 APLP2Q06481 763 aa36.34■■■■□ 3.41
U2AF1-202ENST00000380276 ERVK-7P63135 1459 aa36.32■■■■□ 3.41
U2AF1-202ENST00000380276 DEPDC5O75140 1603 aa36.32■■■■□ 3.4
U2AF1-202ENST00000380276 MROH1Q8NDA8 1641 aa36.32■■■■□ 3.4
U2AF1-202ENST00000380276 DUOX2Q9NRD8 1548 aa36.32■■■■□ 3.4
U2AF1-202ENST00000380276 TOM1O60784 492 aa36.3■■■■□ 3.4
U2AF1-202ENST00000380276 VWDEQ8N2E2 1590 aa36.28■■■■□ 3.4
U2AF1-202ENST00000380276 IQGAP1P46940 1657 aa36.28■■■■□ 3.4
U2AF1-202ENST00000380276 MED14O60244 1454 aa36.27■■■■□ 3.4
U2AF1-202ENST00000380276 CFAP65Q6ZU64 1925 aaKnown RBP36.27■■■■□ 3.4
U2AF1-202ENST00000380276 KIF15Q9NS87 1388 aa36.26■■■■□ 3.39
U2AF1-202ENST00000380276 PTPN23Q9H3S7 1636 aa36.24■■■■□ 3.39
U2AF1-202ENST00000380276 RRP7BPQ9NSQ0 103 aa36.24■■■■□ 3.39
U2AF1-202ENST00000380276 CROCC2H7BZ55 1655 aa36.23■■■■□ 3.39
U2AF1-202ENST00000380276 HSPA1LP34931 641 aa36.21■■■■□ 3.39
U2AF1-202ENST00000380276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.21■■■■□ 3.39
U2AF1-202ENST00000380276 ABCC5O15440 1437 aa36.2■■■■□ 3.39
U2AF1-202ENST00000380276 ERBINQ96RT1 1412 aa36.17■■■■□ 3.38
U2AF1-202ENST00000380276 UBR1Q8IWV7 1749 aa36.17■■■■□ 3.38
U2AF1-202ENST00000380276 PRDM15P57071 1507 aaPredicted RBP36.16■■■■□ 3.38
U2AF1-202ENST00000380276 DAPK1P53355 1430 aa36.15■■■■□ 3.38
U2AF1-202ENST00000380276 KANK1Q14678 1352 aa36.11■■■■□ 3.37
U2AF1-202ENST00000380276 FGD6Q6ZV73 1430 aa36.1■■■■□ 3.37
U2AF1-202ENST00000380276 CHIC2Q9UKJ5 165 aa36.1■■■■□ 3.37
U2AF1-202ENST00000380276 SCAF11Q99590 1463 aaKnown RBP36.1■■■■□ 3.37
U2AF1-202ENST00000380276 STRCP1A6NGW2 1772 aa36.1■■■■□ 3.37
U2AF1-202ENST00000380276 SENP3Q9H4L4 574 aaPredicted RBP36.09■■■■□ 3.37
U2AF1-202ENST00000380276 ARHGAP31Q2M1Z3 1444 aa36.08■■■■□ 3.37
U2AF1-202ENST00000380276 TXNDC2Q86VQ3 553 aa36.07■■■■□ 3.36
U2AF1-202ENST00000380276 STAG3Q9UJ98 1225 aa36.06■■■■□ 3.36
U2AF1-202ENST00000380276 LRRC7Q96NW7 1537 aa36.06■■■■□ 3.36
U2AF1-202ENST00000380276 SYNMO15061 1565 aa36.06■■■■□ 3.36
U2AF1-202ENST00000380276 MED1Q15648 1581 aaPredicted RBP36.05■■■■□ 3.36
U2AF1-202ENST00000380276 ANKRD30AQ9BXX3 1397 aa36.04■■■■□ 3.36
U2AF1-202ENST00000380276 EID1Q9Y6B2 187 aa36.03■■■■□ 3.36
U2AF1-202ENST00000380276 LTKP29376 864 aa36.02■■■■□ 3.36
U2AF1-202ENST00000380276 PIK3C2BO00750 1634 aa36.01■■■■□ 3.36
U2AF1-202ENST00000380276 ALKQ9UM73 1620 aa36.01■■■■□ 3.35
U2AF1-202ENST00000380276 SLIT1O75093 1534 aa36■■■■□ 3.35
U2AF1-202ENST00000380276 ARHGAP23Q9P227 1491 aa35.99■■■■□ 3.35
U2AF1-202ENST00000380276 FAM50AQ14320 339 aaKnown RBP35.92■■■■□ 3.34
U2AF1-202ENST00000380276 PHF23Q9BUL5 403 aaPredicted RBP35.92■■■■□ 3.34
U2AF1-202ENST00000380276 TMEM2Q9UHN6 1383 aa35.91■■■■□ 3.34
U2AF1-202ENST00000380276 LMTK2Q8IWU2 1503 aa35.9■■■■□ 3.34
U2AF1-202ENST00000380276 EFCAB6Q5THR3 1501 aa35.89■■■■□ 3.34
U2AF1-202ENST00000380276 IDI1Q13907 227 aa35.87■■■■□ 3.33
U2AF1-202ENST00000380276 KDM5AP29375 1690 aaKnown RBP35.81■■■■□ 3.32
U2AF1-202ENST00000380276 ADGRL2O95490 1459 aa35.81■■■■□ 3.32
U2AF1-202ENST00000380276 XIRP1Q702N8 1843 aaKnown RBP35.79■■■■□ 3.32
U2AF1-202ENST00000380276 BCANQ96GW7 911 aa35.79■■■■□ 3.32
U2AF1-202ENST00000380276 ADGRB3O60242 1522 aa35.78■■■■□ 3.32
U2AF1-202ENST00000380276 NOS1P29475 1434 aa35.77■■■■□ 3.32
U2AF1-202ENST00000380276 SLC26A8Q96RN1 970 aa35.77■■■■□ 3.32
U2AF1-202ENST00000380276 ANKRD50Q9ULJ7 1429 aa35.75■■■■□ 3.31
U2AF1-202ENST00000380276 SLC52A1Q9NWF4 448 aa35.71■■■■□ 3.31
U2AF1-202ENST00000380276 TMEM94Q12767 1356 aa35.71■■■■□ 3.31
U2AF1-202ENST00000380276 KCNA6P17658 529 aa35.7■■■■□ 3.31
U2AF1-202ENST00000380276 PROSER2Q86WR7 435 aaPredicted RBP35.69■■■■□ 3.3
U2AF1-202ENST00000380276 RBM33Q96EV2 1170 aaKnown RBP35.68■■■■□ 3.3
U2AF1-202ENST00000380276 TET3O43151 1660 aa35.67■■■■□ 3.3
U2AF1-202ENST00000380276 RPRD2Q5VT52 1461 aaKnown RBP35.66■■■■□ 3.3
U2AF1-202ENST00000380276 PPP1R15AO75807 674 aaPredicted RBP35.63■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms