RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 NPM2Q86SE8 214 aaKnown RBP9.98□□□□□ -0.81
CDKL5-201ENST00000379989 ANKRD30AQ9BXX3 1397 aa9.98□□□□□ -0.81
CDKL5-201ENST00000379989 NFKBIBQ15653 356 aa9.97□□□□□ -0.81
CDKL5-201ENST00000379989 NAP1L5Q96NT1 182 aaPredicted RBP9.97□□□□□ -0.81
CDKL5-201ENST00000379989 MYO5CQ9NQX4 1742 aa9.96□□□□□ -0.81
CDKL5-201ENST00000379989 PLXNC1O60486 1568 aa9.96□□□□□ -0.82
CDKL5-201ENST00000379989 ERCC6L2Q5T890 1561 aa9.95□□□□□ -0.82
CDKL5-201ENST00000379989 NCOA1Q15788 1441 aa9.95□□□□□ -0.82
CDKL5-201ENST00000379989 SIN3AQ96ST3 1273 aa9.95□□□□□ -0.82
CDKL5-201ENST00000379989 WDR7Q9Y4E6 1490 aa9.95□□□□□ -0.82
CDKL5-201ENST00000379989 RGS3P49796 1198 aa9.94□□□□□ -0.82
CDKL5-201ENST00000379989 CFDP1Q9UEE9 299 aaPredicted RBP9.94□□□□□ -0.82
CDKL5-201ENST00000379989 CALD1Q05682 793 aaKnown RBP9.94□□□□□ -0.82
CDKL5-201ENST00000379989 FOXD1Q16676 465 aa9.94□□□□□ -0.82
CDKL5-201ENST00000379989 TAF7LQ5H9L4 462 aa9.94□□□□□ -0.82
CDKL5-201ENST00000379989 CCDC141Q6ZP82 1450 aa9.94□□□□□ -0.82
CDKL5-201ENST00000379989 FBLN2P98095 1184 aa9.93□□□□□ -0.82
CDKL5-201ENST00000379989 TONSLQ96HA7 1378 aa9.92□□□□□ -0.82
CDKL5-201ENST00000379989 CDC42BPBQ9Y5S2 1711 aa9.92□□□□□ -0.82
CDKL5-201ENST00000379989 KLHL34Q8N239 644 aa9.91□□□□□ -0.82
CDKL5-201ENST00000379989 ZCCHC11Q5TAX3 1644 aaKnown RBP9.91□□□□□ -0.82
CDKL5-201ENST00000379989 CENPJQ9HC77 1338 aaPredicted RBP9.9□□□□□ -0.82
CDKL5-201ENST00000379989 RPRD2Q5VT52 1461 aaKnown RBP9.9□□□□□ -0.82
CDKL5-201ENST00000379989 PNNQ9H307 717 aaKnown RBP9.9□□□□□ -0.82
CDKL5-201ENST00000379989 CFAP74Q9C0B2 1584 aa9.9□□□□□ -0.83
CDKL5-201ENST00000379989 MBD5Q9P267 1494 aa9.9□□□□□ -0.83
CDKL5-201ENST00000379989 RTEL1-TNFRSF6BF6WH68 1400 aa9.89□□□□□ -0.83
CDKL5-201ENST00000379989 C9orf84Q5VXU9 1444 aa9.89□□□□□ -0.83
CDKL5-201ENST00000379989 TEX14Q8IWB6 1497 aa9.89□□□□□ -0.83
CDKL5-201ENST00000379989 UNC13BO14795 1591 aa9.89□□□□□ -0.83
CDKL5-201ENST00000379989 ARHGEF12Q9NZN5 1544 aa9.89□□□□□ -0.83
CDKL5-201ENST00000379989 SAMD9LQ8IVG5 1584 aa9.89□□□□□ -0.83
CDKL5-201ENST00000379989 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.89□□□□□ -0.83
CDKL5-201ENST00000379989 HIRIP3Q9BW71 556 aaPredicted RBP9.88□□□□□ -0.83
CDKL5-201ENST00000379989 PLCH2O75038 1416 aa9.88□□□□□ -0.83
CDKL5-201ENST00000379989 NAP1L2Q9ULW6 460 aaPredicted RBP9.88□□□□□ -0.83
CDKL5-201ENST00000379989 BBXQ8WY36 941 aaPredicted RBP9.87□□□□□ -0.83
CDKL5-201ENST00000379989 ANKRD50Q9ULJ7 1429 aa9.87□□□□□ -0.83
CDKL5-201ENST00000379989 TSPY4P0CV99 314 aa9.87□□□□□ -0.83
CDKL5-201ENST00000379989 TSPY10P0CW01 314 aa9.87□□□□□ -0.83
CDKL5-201ENST00000379989 ABCA9Q8IUA7 1624 aa9.87□□□□□ -0.83
CDKL5-201ENST00000379989 DUOX2Q9NRD8 1548 aa9.87□□□□□ -0.83
CDKL5-201ENST00000379989 ERBINQ96RT1 1412 aa9.87□□□□□ -0.83
CDKL5-201ENST00000379989 ANKRD30BQ9BXX2 1392 aa9.87□□□□□ -0.83
CDKL5-201ENST00000379989 CLCN1P35523 988 aa9.87□□□□□ -0.83
CDKL5-201ENST00000379989 GTF2E1P29083 439 aaPredicted RBP9.86□□□□□ -0.83
CDKL5-201ENST00000379989 MPHOSPH9Q99550 1183 aa9.86□□□□□ -0.83
CDKL5-201ENST00000379989 PDCL3Q9H2J4 239 aa9.86□□□□□ -0.83
CDKL5-201ENST00000379989 MAGI2Q86UL8 1455 aa9.85□□□□□ -0.83
CDKL5-201ENST00000379989 PDE4AP27815 886 aa9.85□□□□□ -0.83
CDKL5-201ENST00000379989 POLR1AO95602 1720 aaPredicted RBP9.85□□□□□ -0.83
CDKL5-201ENST00000379989 CHMP4BQ9H444 224 aaKnown RBP9.85□□□□□ -0.83
CDKL5-201ENST00000379989 PZPP20742 1482 aa9.85□□□□□ -0.83
CDKL5-201ENST00000379989 ABCC1P33527 1531 aa9.85□□□□□ -0.83
CDKL5-201ENST00000379989 NEURL4Q96JN8 1562 aa9.85□□□□□ -0.83
CDKL5-201ENST00000379989 ARHGAP5Q13017 1502 aa9.84□□□□□ -0.83
CDKL5-201ENST00000379989 TTC37Q6PGP7 1564 aa9.84□□□□□ -0.83
CDKL5-201ENST00000379989 ATP10AO60312 1499 aa9.84□□□□□ -0.83
CDKL5-201ENST00000379989 DENND4BO75064 1496 aaPredicted RBP9.84□□□□□ -0.83
CDKL5-201ENST00000379989 BACH2Q9BYV9 841 aa9.84□□□□□ -0.83
CDKL5-201ENST00000379989 EIF2AK4Q9P2K8 1649 aaKnown RBP9.84□□□□□ -0.83
CDKL5-201ENST00000379989 IQGAP3Q86VI3 1631 aa9.84□□□□□ -0.83
CDKL5-201ENST00000379989 FRAT2O75474 233 aaPredicted RBP9.84□□□□□ -0.83
CDKL5-201ENST00000379989 PAXIP1Q6ZW49 1069 aaPredicted RBP9.84□□□□□ -0.83
CDKL5-201ENST00000379989 KDM6BO15054 1643 aa9.83□□□□□ -0.84
CDKL5-201ENST00000379989 KIF13AQ9H1H9 1805 aa9.83□□□□□ -0.84
CDKL5-201ENST00000379989 STAC3Q96MF2 364 aa9.83□□□□□ -0.84
CDKL5-201ENST00000379989 DNAJC5Q9H3Z4 198 aa9.83□□□□□ -0.84
CDKL5-201ENST00000379989 ARID4BQ4LE39 1312 aaPredicted RBP9.83□□□□□ -0.84
CDKL5-201ENST00000379989 UHRF1BP1Q6BDS2 1440 aa9.82□□□□□ -0.84
CDKL5-201ENST00000379989 EFCAB2Q5VUJ9 269 aa9.82□□□□□ -0.84
CDKL5-201ENST00000379989 DDRGK1Q96HY6 314 aa9.82□□□□□ -0.84
CDKL5-201ENST00000379989 ZBED9Q6R2W3 1325 aa9.81□□□□□ -0.84
CDKL5-201ENST00000379989 TCERG1O14776 1098 aaKnown RBP9.81□□□□□ -0.84
CDKL5-201ENST00000379989 SLC4A3P48751 1232 aa9.81□□□□□ -0.84
CDKL5-201ENST00000379989 KIF15Q9NS87 1388 aa9.81□□□□□ -0.84
CDKL5-201ENST00000379989 RRP7BPQ9NSQ0 103 aa9.8□□□□□ -0.84
CDKL5-201ENST00000379989 LAMC1P11047 1609 aa9.8□□□□□ -0.84
CDKL5-201ENST00000379989 RNF123Q5XPI4 1314 aa9.79□□□□□ -0.84
CDKL5-201ENST00000379989 SYCP2Q9BX26 1530 aa9.79□□□□□ -0.84
CDKL5-201ENST00000379989 DEPDC5O75140 1603 aa9.79□□□□□ -0.84
CDKL5-201ENST00000379989 BCORL1Q5H9F3 1711 aa9.79□□□□□ -0.84
CDKL5-201ENST00000379989 CCDC184Q52MB2 194 aa9.78□□□□□ -0.84
CDKL5-201ENST00000379989 IPO4Q8TEX9 1081 aaKnown RBP9.78□□□□□ -0.84
CDKL5-201ENST00000379989 INO80Q9ULG1 1556 aaPredicted RBP9.77□□□□□ -0.84
CDKL5-201ENST00000379989 POGKQ9P215 609 aa9.77□□□□□ -0.84
CDKL5-201ENST00000379989 CANXP27824 592 aaKnown RBP9.77□□□□□ -0.85
CDKL5-201ENST00000379989 SLC4A1APQ9BWU0 796 aaKnown RBP9.77□□□□□ -0.85
CDKL5-201ENST00000379989 PPRC1Q5VV67 1664 aaKnown RBP9.77□□□□□ -0.85
CDKL5-201ENST00000379989 FAM135AQ9P2D6 1515 aa9.77□□□□□ -0.85
CDKL5-201ENST00000379989 L1TD1Q5T7N2 865 aaKnown RBP9.76□□□□□ -0.85
CDKL5-201ENST00000379989 OSCARQ8IYS5 282 aa9.76□□□□□ -0.85
CDKL5-201ENST00000379989 TPM2P07951 284 aa9.76□□□□□ -0.85
CDKL5-201ENST00000379989 ZNF644Q9H582 1327 aaPredicted RBP9.76□□□□□ -0.85
CDKL5-201ENST00000379989 MS4A1P11836 297 aa9.76□□□□□ -0.85
CDKL5-201ENST00000379989 CHIC2Q9UKJ5 165 aa9.76□□□□□ -0.85
CDKL5-201ENST00000379989 SMG6Q86US8 1419 aaKnown RBP9.75□□□□□ -0.85
CDKL5-201ENST00000379989 RALGAPBQ86X10 1494 aa9.75□□□□□ -0.85
CDKL5-201ENST00000379989 ZFYVE16Q7Z3T8 1539 aa9.74□□□□□ -0.85
CDKL5-201ENST00000379989 ZHX1Q9UKY1 873 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms