RNA–Protein interactions for RNA: ENST00000379721.3

SPINK4-201, Transcript of serine peptidase inhibitor, Kazal type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPINK4, Length 402 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPINK4-201ENST00000379721 KDM5DQ9BY66 1539 aa19.28■□□□□ 0.68
SPINK4-201ENST00000379721 DUOX2Q9NRD8 1548 aa19.28■□□□□ 0.68
SPINK4-201ENST00000379721 RNF17Q9BXT8 1623 aaKnown RBP19.28■□□□□ 0.68
SPINK4-201ENST00000379721 KIF15Q9NS87 1388 aa19.26■□□□□ 0.67
SPINK4-201ENST00000379721 PTPRKQ15262 1439 aa19.25■□□□□ 0.67
SPINK4-201ENST00000379721 FAM50AQ14320 339 aaKnown RBP19.23■□□□□ 0.67
SPINK4-201ENST00000379721 MYO3AQ8NEV4 1616 aa19.22■□□□□ 0.67
SPINK4-201ENST00000379721 WASHC2CQ9Y4E1 1318 aa19.22■□□□□ 0.67
SPINK4-201ENST00000379721 MROH1Q8NDA8 1641 aa19.22■□□□□ 0.67
SPINK4-201ENST00000379721 ZC3H13Q5T200 1668 aaKnown RBP19.21■□□□□ 0.67
SPINK4-201ENST00000379721 ERBINQ96RT1 1412 aa19.21■□□□□ 0.67
SPINK4-201ENST00000379721 RRP7BPQ9NSQ0 103 aa19.21■□□□□ 0.67
SPINK4-201ENST00000379721 ANKRD30AQ9BXX3 1397 aa19.2■□□□□ 0.66
SPINK4-201ENST00000379721 ZNF142P52746 1687 aaPredicted RBP19.2■□□□□ 0.66
SPINK4-201ENST00000379721 STRCQ7RTU9 1775 aa19.19■□□□□ 0.66
SPINK4-201ENST00000379721 CHIC2Q9UKJ5 165 aa19.19■□□□□ 0.66
SPINK4-201ENST00000379721 PZPP20742 1482 aa19.19■□□□□ 0.66
SPINK4-201ENST00000379721 ABCC3O15438 1527 aa19.19■□□□□ 0.66
SPINK4-201ENST00000379721 ADGRL2O95490 1459 aa19.18■□□□□ 0.66
SPINK4-201ENST00000379721 PPARGC1BQ86YN6 1023 aaKnown RBP19.18■□□□□ 0.66
SPINK4-201ENST00000379721 NCOA1Q15788 1441 aa19.17■□□□□ 0.66
SPINK4-201ENST00000379721 CEP152O94986 1710 aa19.17■□□□□ 0.66
SPINK4-201ENST00000379721 PRDM15P57071 1507 aaPredicted RBP19.16■□□□□ 0.66
SPINK4-201ENST00000379721 CEP170BQ9Y4F5 1589 aaPredicted RBP19.16■□□□□ 0.66
SPINK4-201ENST00000379721 DEPDC5O75140 1603 aa19.15■□□□□ 0.66
SPINK4-201ENST00000379721 CAMSAP1Q5T5Y3 1602 aa19.14■□□□□ 0.65
SPINK4-201ENST00000379721 FBXO31Q5XUX0 539 aaPredicted RBP19.13■□□□□ 0.65
SPINK4-201ENST00000379721 TNRQ92752 1358 aa19.13■□□□□ 0.65
SPINK4-201ENST00000379721 A2ML1A8K2U0 1454 aa19.11■□□□□ 0.65
SPINK4-201ENST00000379721 DMRT2Q9Y5R5 561 aa19.1■□□□□ 0.65
SPINK4-201ENST00000379721 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.09■□□□□ 0.65
SPINK4-201ENST00000379721 SPATA31D1Q6ZQQ2 1576 aa19.09■□□□□ 0.65
SPINK4-201ENST00000379721 CFAP65Q6ZU64 1925 aaKnown RBP19.09■□□□□ 0.65
SPINK4-201ENST00000379721 KANK1Q14678 1352 aa19.08■□□□□ 0.65
SPINK4-201ENST00000379721 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.08■□□□□ 0.64
SPINK4-201ENST00000379721 PLA2R1Q13018 1463 aa19.08■□□□□ 0.64
SPINK4-201ENST00000379721 ERVK-7P63135 1459 aa19.07■□□□□ 0.64
SPINK4-201ENST00000379721 PTPRTO14522 1441 aa19.07■□□□□ 0.64
SPINK4-201ENST00000379721 ANKRD50Q9ULJ7 1429 aa19.07■□□□□ 0.64
SPINK4-201ENST00000379721 NLRP1Q9C000 1473 aa19.06■□□□□ 0.64
SPINK4-201ENST00000379721 VWDEQ8N2E2 1590 aa19.06■□□□□ 0.64
SPINK4-201ENST00000379721 ROCK1Q13464 1354 aa19.06■□□□□ 0.64
SPINK4-201ENST00000379721 ARHGAP31Q2M1Z3 1444 aa19.05■□□□□ 0.64
SPINK4-201ENST00000379721 LMTK2Q8IWU2 1503 aa19.04■□□□□ 0.64
SPINK4-201ENST00000379721 RRBP1Q9P2E9 1410 aaKnown RBP19.03■□□□□ 0.64
SPINK4-201ENST00000379721 ITGAEP38570 1179 aa19.02■□□□□ 0.64
SPINK4-201ENST00000379721 NCKAP5LQ9HCH0 1330 aa19.01■□□□□ 0.63
SPINK4-201ENST00000379721 PKD2Q13563 968 aa19.01■□□□□ 0.63
SPINK4-201ENST00000379721 ILDR1Q86SU0 546 aaPredicted RBP19.01■□□□□ 0.63
SPINK4-201ENST00000379721 UGGT1Q9NYU2 1555 aa19.01■□□□□ 0.63
SPINK4-201ENST00000379721 POLR1AO95602 1720 aaPredicted RBP19■□□□□ 0.63
SPINK4-201ENST00000379721 UNC13BO14795 1591 aa18.99■□□□□ 0.63
SPINK4-201ENST00000379721 EFCAB6Q5THR3 1501 aa18.99■□□□□ 0.63
SPINK4-201ENST00000379721 THEMISQ8N1K5 641 aaPredicted RBP18.97■□□□□ 0.63
SPINK4-201ENST00000379721 TET3O43151 1660 aa18.95■□□□□ 0.62
SPINK4-201ENST00000379721 UBR1Q8IWV7 1749 aa18.95■□□□□ 0.62
SPINK4-201ENST00000379721 CERKQ8TCT0 537 aa18.95■□□□□ 0.62
SPINK4-201ENST00000379721 NEURL4Q96JN8 1562 aa18.94■□□□□ 0.62
SPINK4-201ENST00000379721 GCC2Q8IWJ2 1684 aa18.94■□□□□ 0.62
SPINK4-201ENST00000379721 FBXO41Q8TF61 875 aa18.93■□□□□ 0.62
SPINK4-201ENST00000379721 RPRD2Q5VT52 1461 aaKnown RBP18.92■□□□□ 0.62
SPINK4-201ENST00000379721 SYNMO15061 1565 aa18.92■□□□□ 0.62
SPINK4-201ENST00000379721 PIK3C2BO00750 1634 aa18.92■□□□□ 0.62
SPINK4-201ENST00000379721 IQGAP3Q86VI3 1631 aa18.92■□□□□ 0.62
SPINK4-201ENST00000379721 LTBP4Q8N2S1 1624 aa18.92■□□□□ 0.62
SPINK4-201ENST00000379721 ANKLE2Q86XL3 938 aa18.91■□□□□ 0.62
SPINK4-201ENST00000379721 NOS1P29475 1434 aa18.91■□□□□ 0.62
SPINK4-201ENST00000379721 KDM5AP29375 1690 aaKnown RBP18.89■□□□□ 0.61
SPINK4-201ENST00000379721 MED14O60244 1454 aa18.88■□□□□ 0.61
SPINK4-201ENST00000379721 E9PCH4 1651 aa18.87■□□□□ 0.61
SPINK4-201ENST00000379721 IQGAP1P46940 1657 aa18.86■□□□□ 0.61
SPINK4-201ENST00000379721 SLIT1O75093 1534 aa18.86■□□□□ 0.61
SPINK4-201ENST00000379721 NPHP4O75161 1426 aaPredicted RBP18.86■□□□□ 0.61
SPINK4-201ENST00000379721 NUP155O75694 1391 aa18.86■□□□□ 0.61
SPINK4-201ENST00000379721 ZNF335Q9H4Z2 1342 aaPredicted RBP18.86■□□□□ 0.61
SPINK4-201ENST00000379721 ARHGAP23Q9P227 1491 aa18.85■□□□□ 0.61
SPINK4-201ENST00000379721 NAIPQ13075 1403 aa18.85■□□□□ 0.61
SPINK4-201ENST00000379721 IDI1Q13907 227 aa18.85■□□□□ 0.61
SPINK4-201ENST00000379721 STAG3Q9UJ98 1225 aa18.84■□□□□ 0.61
SPINK4-201ENST00000379721 ADGRB3O60242 1522 aa18.84■□□□□ 0.61
SPINK4-201ENST00000379721 SCAF11Q99590 1463 aaKnown RBP18.84■□□□□ 0.61
SPINK4-201ENST00000379721 SLC52A1Q9NWF4 448 aa18.82■□□□□ 0.6
SPINK4-201ENST00000379721 IQSEC2Q5JU85 1478 aa18.82■□□□□ 0.6
SPINK4-201ENST00000379721 HFM1A2PYH4 1435 aa18.81■□□□□ 0.6
SPINK4-201ENST00000379721 TMEM2Q9UHN6 1383 aa18.81■□□□□ 0.6
SPINK4-201ENST00000379721 LTKP29376 864 aa18.79■□□□□ 0.6
SPINK4-201ENST00000379721 TXNDC2Q86VQ3 553 aa18.79■□□□□ 0.6
SPINK4-201ENST00000379721 MYO5BQ9ULV0 1848 aa18.79■□□□□ 0.6
SPINK4-201ENST00000379721 EID1Q9Y6B2 187 aa18.78■□□□□ 0.6
SPINK4-201ENST00000379721 CPS1P31327 1500 aa18.76■□□□□ 0.59
SPINK4-201ENST00000379721 TMEM131LA2VDJ0 1609 aa18.76■□□□□ 0.59
SPINK4-201ENST00000379721 SPHKAPQ2M3C7 1700 aa18.76■□□□□ 0.59
SPINK4-201ENST00000379721 STRCP1A6NGW2 1772 aa18.72■□□□□ 0.59
SPINK4-201ENST00000379721 ZFYVE9O95405 1425 aa18.7■□□□□ 0.58
SPINK4-201ENST00000379721 TRIM52Q96A61 297 aa18.7■□□□□ 0.58
SPINK4-201ENST00000379721 RIMS2Q9UQ26 1411 aa18.69■□□□□ 0.58
SPINK4-201ENST00000379721 CHGAP10645 457 aaKnown RBP18.69■□□□□ 0.58
SPINK4-201ENST00000379721 TRPM2O94759 1503 aa18.66■□□□□ 0.58
SPINK4-201ENST00000379721 CLTCL1P53675 1640 aa18.65■□□□□ 0.58
SPINK4-201ENST00000379721 HDGFP51858 240 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms