RNA–Protein interactions for RNA: ENST00000379404.5

SMS-201, Transcript of spermine synthase, humanhuman

TSL 3 BASIC

Gene SMS, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-201ENST00000379404 FAM135AQ9P2D6 1515 aa22.78■■□□□ 1.24
SMS-201ENST00000379404 KIF15Q9NS87 1388 aa22.77■■□□□ 1.24
SMS-201ENST00000379404 RRP7BPQ9NSQ0 103 aa22.77■■□□□ 1.24
SMS-201ENST00000379404 RNF17Q9BXT8 1623 aaKnown RBP22.77■■□□□ 1.24
SMS-201ENST00000379404 EIF2AK4Q9P2K8 1649 aaKnown RBP22.77■■□□□ 1.24
SMS-201ENST00000379404 WASHC2CQ9Y4E1 1318 aa22.76■■□□□ 1.23
SMS-201ENST00000379404 NCOA1Q15788 1441 aa22.75■■□□□ 1.23
SMS-201ENST00000379404 PPARGC1BQ86YN6 1023 aaKnown RBP22.75■■□□□ 1.23
SMS-201ENST00000379404 CHIC2Q9UKJ5 165 aa22.75■■□□□ 1.23
SMS-201ENST00000379404 KDM5DQ9BY66 1539 aa22.75■■□□□ 1.23
SMS-201ENST00000379404 MROH1Q8NDA8 1641 aa22.75■■□□□ 1.23
SMS-201ENST00000379404 FAM50AQ14320 339 aaKnown RBP22.74■■□□□ 1.23
SMS-201ENST00000379404 FBXO31Q5XUX0 539 aaPredicted RBP22.72■■□□□ 1.23
SMS-201ENST00000379404 ANKRD30AQ9BXX3 1397 aa22.72■■□□□ 1.23
SMS-201ENST00000379404 ERBINQ96RT1 1412 aa22.72■■□□□ 1.23
SMS-201ENST00000379404 ADGRL2O95490 1459 aa22.72■■□□□ 1.23
SMS-201ENST00000379404 PZPP20742 1482 aa22.71■■□□□ 1.23
SMS-201ENST00000379404 STRCQ7RTU9 1775 aa22.7■■□□□ 1.22
SMS-201ENST00000379404 ABCC3O15438 1527 aa22.69■■□□□ 1.22
SMS-201ENST00000379404 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.65■■□□□ 1.22
SMS-201ENST00000379404 MYO3AQ8NEV4 1616 aa22.65■■□□□ 1.22
SMS-201ENST00000379404 PRDM15P57071 1507 aaPredicted RBP22.64■■□□□ 1.21
SMS-201ENST00000379404 ZC3H13Q5T200 1668 aaKnown RBP22.64■■□□□ 1.21
SMS-201ENST00000379404 DEPDC5O75140 1603 aa22.64■■□□□ 1.21
SMS-201ENST00000379404 ZNF142P52746 1687 aaPredicted RBP22.63■■□□□ 1.21
SMS-201ENST00000379404 TNRQ92752 1358 aa22.63■■□□□ 1.21
SMS-201ENST00000379404 CEP170BQ9Y4F5 1589 aaPredicted RBP22.62■■□□□ 1.21
SMS-201ENST00000379404 DMRT2Q9Y5R5 561 aa22.61■■□□□ 1.21
SMS-201ENST00000379404 A2ML1A8K2U0 1454 aa22.6■■□□□ 1.21
SMS-201ENST00000379404 CAMSAP1Q5T5Y3 1602 aa22.6■■□□□ 1.21
SMS-201ENST00000379404 CEP152O94986 1710 aa22.6■■□□□ 1.21
SMS-201ENST00000379404 VWDEQ8N2E2 1590 aa22.59■■□□□ 1.21
SMS-201ENST00000379404 ARHGAP31Q2M1Z3 1444 aa22.58■■□□□ 1.21
SMS-201ENST00000379404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.58■■□□□ 1.212e-6■□□□□ 9.7
SMS-201ENST00000379404 ROCK1Q13464 1354 aa22.58■■□□□ 1.21
SMS-201ENST00000379404 SPATA31D1Q6ZQQ2 1576 aa22.58■■□□□ 1.2
SMS-201ENST00000379404 PTPRTO14522 1441 aa22.57■■□□□ 1.2
SMS-201ENST00000379404 ANKRD50Q9ULJ7 1429 aa22.57■■□□□ 1.2
SMS-201ENST00000379404 RRBP1Q9P2E9 1410 aaKnown RBP22.57■■□□□ 1.2
SMS-201ENST00000379404 PLA2R1Q13018 1463 aa22.56■■□□□ 1.2
SMS-201ENST00000379404 ERVK-7P63135 1459 aa22.55■■□□□ 1.2
SMS-201ENST00000379404 LMTK2Q8IWU2 1503 aa22.55■■□□□ 1.2
SMS-201ENST00000379404 NCKAP5LQ9HCH0 1330 aa22.54■■□□□ 1.2
SMS-201ENST00000379404 NLRP1Q9C000 1473 aa22.54■■□□□ 1.2
SMS-201ENST00000379404 ILDR1Q86SU0 546 aaPredicted RBP22.53■■□□□ 1.2
SMS-201ENST00000379404 KANK1Q14678 1352 aa22.52■■□□□ 1.2
SMS-201ENST00000379404 PKD2Q13563 968 aa22.52■■□□□ 1.2
SMS-201ENST00000379404 ITGAEP38570 1179 aa22.51■■□□□ 1.19
SMS-201ENST00000379404 CFAP65Q6ZU64 1925 aaKnown RBP22.5■■□□□ 1.19
SMS-201ENST00000379404 THEMISQ8N1K5 641 aaPredicted RBP22.47■■□□□ 1.19
SMS-201ENST00000379404 UGGT1Q9NYU2 1555 aa22.46■■□□□ 1.19
SMS-201ENST00000379404 CERKQ8TCT0 537 aa22.45■■□□□ 1.18
SMS-201ENST00000379404 UNC13BO14795 1591 aa22.43■■□□□ 1.18
SMS-201ENST00000379404 EFCAB6Q5THR3 1501 aa22.43■■□□□ 1.18
SMS-201ENST00000379404 NOS1P29475 1434 aa22.42■■□□□ 1.18
SMS-201ENST00000379404 FBXO41Q8TF61 875 aa22.42■■□□□ 1.18
SMS-201ENST00000379404 LTBP4Q8N2S1 1624 aa22.41■■□□□ 1.18
SMS-201ENST00000379404 NEURL4Q96JN8 1562 aa22.41■■□□□ 1.18
SMS-201ENST00000379404 ANKLE2Q86XL3 938 aa22.4■■□□□ 1.18
SMS-201ENST00000379404 IDI1Q13907 227 aa22.39■■□□□ 1.17
SMS-201ENST00000379404 UBR1Q8IWV7 1749 aa22.39■■□□□ 1.17
SMS-201ENST00000379404 SYNMO15061 1565 aa22.38■■□□□ 1.17
SMS-201ENST00000379404 TET3O43151 1660 aa22.37■■□□□ 1.17
SMS-201ENST00000379404 RPRD2Q5VT52 1461 aaKnown RBP22.37■■□□□ 1.17
SMS-201ENST00000379404 MED14O60244 1454 aa22.36■■□□□ 1.17
SMS-201ENST00000379404 POLR1AO95602 1720 aaPredicted RBP22.36■■□□□ 1.17
SMS-201ENST00000379404 NAIPQ13075 1403 aa22.35■■□□□ 1.17
SMS-201ENST00000379404 IQGAP3Q86VI3 1631 aa22.35■■□□□ 1.17
SMS-201ENST00000379404 ARHGAP23Q9P227 1491 aa22.34■■□□□ 1.17
SMS-201ENST00000379404 ZNF335Q9H4Z2 1342 aaPredicted RBP22.34■■□□□ 1.17
SMS-201ENST00000379404 PIK3C2BO00750 1634 aa22.34■■□□□ 1.17
SMS-201ENST00000379404 NUP155O75694 1391 aa22.34■■□□□ 1.17
SMS-201ENST00000379404 GCC2Q8IWJ2 1684 aa22.33■■□□□ 1.16
SMS-201ENST00000379404 SLIT1O75093 1534 aa22.32■■□□□ 1.16
SMS-201ENST00000379404 LTKP29376 864 aa22.32■■□□□ 1.16
SMS-201ENST00000379404 SLC52A1Q9NWF4 448 aa22.32■■□□□ 1.16
SMS-201ENST00000379404 NPHP4O75161 1426 aaPredicted RBP22.31■■□□□ 1.16
SMS-201ENST00000379404 KDM5AP29375 1690 aaKnown RBP22.3■■□□□ 1.16
SMS-201ENST00000379404 E9PCH4 1651 aa22.3■■□□□ 1.16
SMS-201ENST00000379404 HFM1A2PYH4 1435 aa22.29■■□□□ 1.16
SMS-201ENST00000379404 TMEM2Q9UHN6 1383 aa22.28■■□□□ 1.16
SMS-201ENST00000379404 TXNDC2Q86VQ3 553 aa22.26■■□□□ 1.15
SMS-201ENST00000379404 SCAF11Q99590 1463 aaKnown RBP22.26■■□□□ 1.15
SMS-201ENST00000379404 IQGAP1P46940 1657 aa22.24■■□□□ 1.15
SMS-201ENST00000379404 IQSEC2Q5JU85 1478 aa22.24■■□□□ 1.15
SMS-201ENST00000379404 STAG3Q9UJ98 1225 aa22.24■■□□□ 1.15
SMS-201ENST00000379404 ADGRB3O60242 1522 aa22.22■■□□□ 1.15
SMS-201ENST00000379404 EID1Q9Y6B2 187 aa22.21■■□□□ 1.15
SMS-201ENST00000379404 TMEM131LA2VDJ0 1609 aa22.19■■□□□ 1.14
SMS-201ENST00000379404 ZFYVE9O95405 1425 aa22.16■■□□□ 1.14
SMS-201ENST00000379404 CPS1P31327 1500 aa22.16■■□□□ 1.14
SMS-201ENST00000379404 MYO5BQ9ULV0 1848 aa22.15■■□□□ 1.14
SMS-201ENST00000379404 STRCP1A6NGW2 1772 aa22.14■■□□□ 1.13
SMS-201ENST00000379404 TRIM52Q96A61 297 aa22.12■■□□□ 1.13
SMS-201ENST00000379404 RIMS2Q9UQ26 1411 aa22.11■■□□□ 1.13
SMS-201ENST00000379404 SPHKAPQ2M3C7 1700 aa22.11■■□□□ 1.13
SMS-201ENST00000379404 CHGAP10645 457 aaKnown RBP22.08■■□□□ 1.13
SMS-201ENST00000379404 LRRC7Q96NW7 1537 aa22.07■■□□□ 1.12
SMS-201ENST00000379404 HDGFP51858 240 aaKnown RBP22.07■■□□□ 1.12
SMS-201ENST00000379404 SLC26A8Q96RN1 970 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms