RNA–Protein interactions for RNA: ENST00000379145.5

PCYT1B-203, Transcript of phosphate cytidylyltransferase 1, choline, beta, humanhuman

TSL 1 (best) BASIC

Gene PCYT1B, Length 5,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1B-203ENST00000379145 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.97□□□□□ -0.49
PCYT1B-203ENST00000379145 C8orf34Q49A92 452 aa11.96□□□□□ -0.49
PCYT1B-203ENST00000379145 NAIPQ13075 1403 aa11.96□□□□□ -0.49
PCYT1B-203ENST00000379145 FTSJ3Q8IY81 847 aaKnown RBP11.96□□□□□ -0.49
PCYT1B-203ENST00000379145 COG6Q9Y2V7 657 aa11.96□□□□□ -0.5
PCYT1B-203ENST00000379145 NCOA2Q15596 1464 aa11.96□□□□□ -0.5
PCYT1B-203ENST00000379145 CDK11BP21127 795 aaKnown RBP11.95□□□□□ -0.5
PCYT1B-203ENST00000379145 IGF1RP08069 1367 aa11.95□□□□□ -0.5
PCYT1B-203ENST00000379145 PMFBP1Q8TBY8 1022 aa11.95□□□□□ -0.5
PCYT1B-203ENST00000379145 PTMSP20962 102 aa11.93□□□□□ -0.5
PCYT1B-203ENST00000379145 RWDD1Q9H446 243 aaPredicted RBP11.93□□□□□ -0.5
PCYT1B-203ENST00000379145 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.93□□□□□ -0.5
PCYT1B-203ENST00000379145 TOP2BQ02880 1626 aa11.93□□□□□ -0.5
PCYT1B-203ENST00000379145 MYOM3Q5VTT5 1437 aa11.93□□□□□ -0.5
PCYT1B-203ENST00000379145 MAP7D2Q96T17 732 aa11.93□□□□□ -0.5
PCYT1B-203ENST00000379145 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.93□□□□□ -0.5
PCYT1B-203ENST00000379145 CLUAP1Q96AJ1 413 aa11.92□□□□□ -0.5
PCYT1B-203ENST00000379145 ERCC6Q03468 1493 aa11.92□□□□□ -0.5
PCYT1B-203ENST00000379145 TMF1P82094 1093 aa11.92□□□□□ -0.5
PCYT1B-203ENST00000379145 SKOR2Q2VWA4 1001 aaPredicted RBP11.92□□□□□ -0.5
PCYT1B-203ENST00000379145 PANK3Q9H999 370 aa11.92□□□□□ -0.5
PCYT1B-203ENST00000379145 PHF23Q9BUL5 403 aaPredicted RBP11.91□□□□□ -0.5
PCYT1B-203ENST00000379145 DDX49Q9Y6V7 483 aaKnown RBP11.91□□□□□ -0.5
PCYT1B-203ENST00000379145 NASPP49321 788 aaPredicted RBP11.91□□□□□ -0.5
PCYT1B-203ENST00000379145 ADAMTS8Q9UP79 889 aa11.91□□□□□ -0.5
PCYT1B-203ENST00000379145 AQRO60306 1485 aaKnown RBP eCLIP11.91□□□□□ -0.5
PCYT1B-203ENST00000379145 CENPJQ9HC77 1338 aaPredicted RBP11.9□□□□□ -0.5
PCYT1B-203ENST00000379145 CGNL1Q0VF96 1302 aa11.9□□□□□ -0.5
PCYT1B-203ENST00000379145 TPRNQ4KMQ1 711 aa11.9□□□□□ -0.5
PCYT1B-203ENST00000379145 C22orf23Q9BZE7 217 aa11.9□□□□□ -0.5
PCYT1B-203ENST00000379145 PRDM10Q9NQV6 1147 aa11.9□□□□□ -0.51
PCYT1B-203ENST00000379145 CFDP1Q9UEE9 299 aaPredicted RBP11.9□□□□□ -0.51
PCYT1B-203ENST00000379145 ATAD2BQ9ULI0 1458 aa11.89□□□□□ -0.51
PCYT1B-203ENST00000379145 PANK1Q8TE04 598 aa11.89□□□□□ -0.51
PCYT1B-203ENST00000379145 CALD1Q05682 793 aaKnown RBP11.89□□□□□ -0.51
PCYT1B-203ENST00000379145 TBC1D2Q9BYX2 928 aa11.89□□□□□ -0.51
PCYT1B-203ENST00000379145 PEG3Q9GZU2 1588 aa11.89□□□□□ -0.51
PCYT1B-203ENST00000379145 CASKIN1Q8WXD9 1431 aa11.88□□□□□ -0.51
PCYT1B-203ENST00000379145 BCAR3O75815 825 aa11.88□□□□□ -0.51
PCYT1B-203ENST00000379145 CCDC173Q0VFZ6 552 aa11.88□□□□□ -0.51
PCYT1B-203ENST00000379145 PTPRKQ15262 1439 aa11.88□□□□□ -0.51
PCYT1B-203ENST00000379145 TSPY4P0CV99 314 aa11.88□□□□□ -0.51
PCYT1B-203ENST00000379145 TSPY10P0CW01 314 aa11.88□□□□□ -0.51
PCYT1B-203ENST00000379145 CHGAP10645 457 aaKnown RBP11.87□□□□□ -0.51
PCYT1B-203ENST00000379145 PTPN23Q9H3S7 1636 aa11.87□□□□□ -0.51
PCYT1B-203ENST00000379145 PLCB2Q00722 1185 aa11.87□□□□□ -0.51
PCYT1B-203ENST00000379145 ZHX1Q9UKY1 873 aaPredicted RBP11.87□□□□□ -0.51
PCYT1B-203ENST00000379145 UQCRHLA0A096LP55 91 aa11.86□□□□□ -0.51
PCYT1B-203ENST00000379145 UQCRHP07919 91 aa11.86□□□□□ -0.51
PCYT1B-203ENST00000379145 BCL2L13Q9BXK5 485 aa11.86□□□□□ -0.51
PCYT1B-203ENST00000379145 APAF1O14727 1248 aa11.86□□□□□ -0.51
PCYT1B-203ENST00000379145 ISY1Q9ULR0 285 aaKnown RBP11.86□□□□□ -0.51
PCYT1B-203ENST00000379145 FYCO1Q9BQS8 1478 aa11.86□□□□□ -0.51
PCYT1B-203ENST00000379145 NCAPD3P42695 1498 aa11.86□□□□□ -0.51
PCYT1B-203ENST00000379145 DHX29Q7Z478 1369 aaKnown RBP11.85□□□□□ -0.51
PCYT1B-203ENST00000379145 PCF11O94913 1555 aaKnown RBP11.85□□□□□ -0.51
PCYT1B-203ENST00000379145 MIA2Q96PC5 1412 aa11.85□□□□□ -0.51
PCYT1B-203ENST00000379145 ZSCAN30Q86W11 494 aa11.85□□□□□ -0.51
PCYT1B-203ENST00000379145 MTERF4Q7Z6M4 381 aaKnown RBP11.85□□□□□ -0.51
PCYT1B-203ENST00000379145 CUX1P39880 1505 aa11.85□□□□□ -0.51
PCYT1B-203ENST00000379145 CFTRP13569 1480 aa11.84□□□□□ -0.51
PCYT1B-203ENST00000379145 E9PSI1 815 aa11.84□□□□□ -0.51
PCYT1B-203ENST00000379145 SEC24BO95487 1268 aa11.84□□□□□ -0.51
PCYT1B-203ENST00000379145 PDZRN3Q9UPQ7 1066 aa11.84□□□□□ -0.51
PCYT1B-203ENST00000379145 CSPP1Q1MSJ5 1256 aa11.84□□□□□ -0.51
PCYT1B-203ENST00000379145 KIAA2012Q0VF49 1180 aa11.83□□□□□ -0.52
PCYT1B-203ENST00000379145 NUP155O75694 1391 aa11.83□□□□□ -0.52
PCYT1B-203ENST00000379145 EIF3AQ14152 1382 aaKnown RBP11.82□□□□□ -0.52
PCYT1B-203ENST00000379145 KDM2BQ8NHM5 1336 aa11.82□□□□□ -0.52
PCYT1B-203ENST00000379145 IGHDP01880 384 aa11.82□□□□□ -0.52
PCYT1B-203ENST00000379145 CHAF1AQ13111 956 aaPredicted RBP11.82□□□□□ -0.52
PCYT1B-203ENST00000379145 CDCA8Q53HL2 280 aa11.82□□□□□ -0.52
PCYT1B-203ENST00000379145 SENP3Q9H4L4 574 aaPredicted RBP11.82□□□□□ -0.52
PCYT1B-203ENST00000379145 ANKRD30BQ9BXX2 1392 aa11.81□□□□□ -0.52
PCYT1B-203ENST00000379145 ITPRIPQ8IWB1 547 aa11.81□□□□□ -0.52
PCYT1B-203ENST00000379145 RRP7AQ9Y3A4 280 aaKnown RBP11.8□□□□□ -0.52
PCYT1B-203ENST00000379145 XPCQ01831 940 aaPredicted RBP11.79□□□□□ -0.52
PCYT1B-203ENST00000379145 MCTP1Q6DN14 999 aa11.79□□□□□ -0.52
PCYT1B-203ENST00000379145 DUSP27Q5VZP5 1158 aa11.79□□□□□ -0.52
PCYT1B-203ENST00000379145 TBC1D32Q96NH3 1257 aa11.79□□□□□ -0.52
PCYT1B-203ENST00000379145 ZNF644Q9H582 1327 aaPredicted RBP11.78□□□□□ -0.52
PCYT1B-203ENST00000379145 CAVIN1Q6NZI2 390 aaKnown RBP11.78□□□□□ -0.52
PCYT1B-203ENST00000379145 ZNF771Q7L3S4 317 aaPredicted RBP11.78□□□□□ -0.52
PCYT1B-203ENST00000379145 LRPPRCP42704 1394 aaKnown RBP11.78□□□□□ -0.52
PCYT1B-203ENST00000379145 FOXD4L5Q5VV16 416 aaPredicted RBP11.78□□□□□ -0.52
PCYT1B-203ENST00000379145 FOXD4L4Q8WXT5 416 aaPredicted RBP11.78□□□□□ -0.52
PCYT1B-203ENST00000379145 FGD5Q6ZNL6 1462 aa11.78□□□□□ -0.52
PCYT1B-203ENST00000379145 PDE4CQ08493 712 aa11.77□□□□□ -0.52
PCYT1B-203ENST00000379145 NPHP1O15259 732 aa11.77□□□□□ -0.53
PCYT1B-203ENST00000379145 RPRD2Q5VT52 1461 aaKnown RBP11.77□□□□□ -0.53
PCYT1B-203ENST00000379145 PDE3AQ14432 1141 aa11.77□□□□□ -0.53
PCYT1B-203ENST00000379145 TNPO1Q92973 898 aaKnown RBP11.76□□□□□ -0.53
PCYT1B-203ENST00000379145 SLFN5Q08AF3 891 aa11.76□□□□□ -0.53
PCYT1B-203ENST00000379145 RNF214Q8ND24 703 aa11.75□□□□□ -0.53
PCYT1B-203ENST00000379145 OFD1O75665 1012 aa11.75□□□□□ -0.53
PCYT1B-203ENST00000379145 PPP2R1AP30153 589 aa11.75□□□□□ -0.53
PCYT1B-203ENST00000379145 CCDC39Q9UFE4 941 aa11.75□□□□□ -0.53
PCYT1B-203ENST00000379145 FSD2A1L4K1 749 aa11.74□□□□□ -0.53
PCYT1B-203ENST00000379145 SMC4Q9NTJ3 1288 aa11.74□□□□□ -0.53
PCYT1B-203ENST00000379145 CBX1P83916 185 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms