RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 IQGAP3Q86VI3 1631 aa27.44■■□□□ 1.98
SSU72-204ENST00000378726 DHX29Q7Z478 1369 aaKnown RBP27.43■■□□□ 1.98
SSU72-204ENST00000378726 KIF3BO15066 747 aa27.41■■□□□ 1.98
SSU72-204ENST00000378726 NEO1Q92859 1461 aa27.41■■□□□ 1.98
SSU72-204ENST00000378726 POGZQ7Z3K3 1410 aa27.4■■□□□ 1.98
SSU72-204ENST00000378726 FAM69CQ0P6D2 419 aa27.39■■□□□ 1.98
SSU72-204ENST00000378726 EIF4G2P78344 907 aaKnown RBP eCLIP27.37■■□□□ 1.97
SSU72-204ENST00000378726 DDX10Q13206 875 aaKnown RBP27.37■■□□□ 1.97
SSU72-204ENST00000378726 KIDINS220Q9ULH0 1771 aa27.36■■□□□ 1.97
SSU72-204ENST00000378726 RAPGEF3O95398 923 aa27.36■■□□□ 1.97
SSU72-204ENST00000378726 HSPA5P11021 654 aaKnown RBP27.36■■□□□ 1.97
SSU72-204ENST00000378726 PLA2R1Q13018 1463 aa27.36■■□□□ 1.97
SSU72-204ENST00000378726 CCDC144AA2RUR9 1427 aa27.36■■□□□ 1.97
SSU72-204ENST00000378726 GLI2P10070 1586 aa27.36■■□□□ 1.97
SSU72-204ENST00000378726 MLH3Q9UHC1 1453 aa27.34■■□□□ 1.97
SSU72-204ENST00000378726 MAP3K4Q9Y6R4 1608 aa27.34■■□□□ 1.97
SSU72-204ENST00000378726 ZNF326Q5BKZ1 582 aaKnown RBP27.33■■□□□ 1.97
SSU72-204ENST00000378726 KDM5CP41229 1560 aa27.33■■□□□ 1.97
SSU72-204ENST00000378726 KANK1Q14678 1352 aa27.32■■□□□ 1.96
SSU72-204ENST00000378726 DCAF11Q8TEB1 546 aa27.3■■□□□ 1.96
SSU72-204ENST00000378726 KDM2AQ9Y2K7 1162 aa27.3■■□□□ 1.96
SSU72-204ENST00000378726 A2MP01023 1474 aa27.29■■□□□ 1.96
SSU72-204ENST00000378726 DEPDC5O75140 1603 aa27.29■■□□□ 1.96
SSU72-204ENST00000378726 ATP10AO60312 1499 aa27.28■■□□□ 1.96
SSU72-204ENST00000378726 RGL3Q3MIN7 710 aa27.26■■□□□ 1.96
SSU72-204ENST00000378726 EIF2AK4Q9P2K8 1649 aaKnown RBP27.26■■□□□ 1.96
SSU72-204ENST00000378726 HECW2Q9P2P5 1572 aa27.25■■□□□ 1.95
SSU72-204ENST00000378726 UHRF1BP1Q6BDS2 1440 aa27.25■■□□□ 1.95
SSU72-204ENST00000378726 DIP2BQ9P265 1576 aa27.24■■□□□ 1.95
SSU72-204ENST00000378726 VWDEQ8N2E2 1590 aa27.22■■□□□ 1.95
SSU72-204ENST00000378726 E9PCH4 1651 aa27.2■■□□□ 1.94
SSU72-204ENST00000378726 PRDM15P57071 1507 aaPredicted RBP27.19■■□□□ 1.94
SSU72-204ENST00000378726 MROH1Q8NDA8 1641 aa27.18■■□□□ 1.94
SSU72-204ENST00000378726 GGT6Q6P531 493 aa27.18■■□□□ 1.94
SSU72-204ENST00000378726 SPATA31E1Q6ZUB1 1445 aa27.17■■□□□ 1.94
SSU72-204ENST00000378726 TET3O43151 1660 aa27.17■■□□□ 1.94
SSU72-204ENST00000378726 PTPRTO14522 1441 aa27.16■■□□□ 1.94
SSU72-204ENST00000378726 WASHC2AQ641Q2 1341 aa27.16■■□□□ 1.94
SSU72-204ENST00000378726 FRMPD1Q5SYB0 1578 aa27.16■■□□□ 1.94
SSU72-204ENST00000378726 ABCA6Q8N139 1617 aa27.15■■□□□ 1.94
SSU72-204ENST00000378726 RICTORQ6R327 1708 aa27.14■■□□□ 1.94
SSU72-204ENST00000378726 CARD11Q9BXL7 1154 aa27.12■■□□□ 1.93
SSU72-204ENST00000378726 C11orf95C9JLR9 678 aaPredicted RBP27.12■■□□□ 1.93
SSU72-204ENST00000378726 RALGAPBQ86X10 1494 aa27.11■■□□□ 1.93
SSU72-204ENST00000378726 TSPOAP1O95153 1857 aa27.11■■□□□ 1.93
SSU72-204ENST00000378726 TRPM2O94759 1503 aa27.1■■□□□ 1.93
SSU72-204ENST00000378726 USP47Q96K76 1375 aa27.09■■□□□ 1.93
SSU72-204ENST00000378726 RNF17Q9BXT8 1623 aaKnown RBP27.09■■□□□ 1.93
SSU72-204ENST00000378726 PRAG1Q86YV5 1406 aa27.08■■□□□ 1.93
SSU72-204ENST00000378726 YEATS2Q9ULM3 1422 aa27.08■■□□□ 1.93
SSU72-204ENST00000378726 DIP2CQ9Y2E4 1556 aa27.08■■□□□ 1.93
SSU72-204ENST00000378726 LMTK2Q8IWU2 1503 aa27.07■■□□□ 1.92
SSU72-204ENST00000378726 WASHC2CQ9Y4E1 1318 aa27.07■■□□□ 1.92
SSU72-204ENST00000378726 SPHKAPQ2M3C7 1700 aa27.06■■□□□ 1.92
SSU72-204ENST00000378726 PPRC1Q5VV67 1664 aaKnown RBP27.06■■□□□ 1.92
SSU72-204ENST00000378726 CCDC7Q96M83 1385 aa27.04■■□□□ 1.92
SSU72-204ENST00000378726 EFCAB6Q5THR3 1501 aa27.04■■□□□ 1.92
SSU72-204ENST00000378726 SUPT16HQ9Y5B9 1047 aaKnown RBP27.04■■□□□ 1.92
SSU72-204ENST00000378726 ROCK2O75116 1388 aaKnown RBP27.04■■□□□ 1.92
SSU72-204ENST00000378726 ANP32CO43423 234 aa27.03■■□□□ 1.92
SSU72-204ENST00000378726 BCORL1Q5H9F3 1711 aa27.02■■□□□ 1.92
SSU72-204ENST00000378726 CLTCL1P53675 1640 aa27.01■■□□□ 1.91
SSU72-204ENST00000378726 NBPF1Q3BBV0 1214 aa27■■□□□ 1.91
SSU72-204ENST00000378726 CEP152O94986 1710 aa27■■□□□ 1.91
SSU72-204ENST00000378726 KIF7Q2M1P5 1343 aa26.99■■□□□ 1.91
SSU72-204ENST00000378726 ZMYM4Q5VZL5 1548 aa26.98■■□□□ 1.91
SSU72-204ENST00000378726 STAC3Q96MF2 364 aa26.97■■□□□ 1.91
SSU72-204ENST00000378726 NPATQ14207 1427 aa26.96■■□□□ 1.91
SSU72-204ENST00000378726 KIF13AQ9H1H9 1805 aa26.96■■□□□ 1.91
SSU72-204ENST00000378726 ST20-MTHFSA0A0A6YYL1 179 aa26.96■■□□□ 1.91
SSU72-204ENST00000378726 TRPM1Q7Z4N2 1603 aa26.95■■□□□ 1.9
SSU72-204ENST00000378726 ABCC3O15438 1527 aa26.95■■□□□ 1.9
SSU72-204ENST00000378726 UGGT1Q9NYU2 1555 aa26.92■■□□□ 1.9
SSU72-204ENST00000378726 GPRASP1Q5JY77 1395 aa26.92■■□□□ 1.9
SSU72-204ENST00000378726 CNTLNQ9NXG0 1405 aa26.89■■□□□ 1.9
SSU72-204ENST00000378726 COL17A1Q9UMD9 1497 aaPredicted RBP26.89■■□□□ 1.9
SSU72-204ENST00000378726 ARID4BQ4LE39 1312 aaPredicted RBP26.89■■□□□ 1.89
SSU72-204ENST00000378726 CCER2I3L3R5 266 aa26.88■■□□□ 1.89
SSU72-204ENST00000378726 POLR3GLQ9BT43 218 aa26.88■■□□□ 1.89
SSU72-204ENST00000378726 NEURL4Q96JN8 1562 aa26.87■■□□□ 1.89
SSU72-204ENST00000378726 CFAP65Q6ZU64 1925 aaKnown RBP26.86■■□□□ 1.89
SSU72-204ENST00000378726 CHGAP10645 457 aaKnown RBP26.86■■□□□ 1.89
SSU72-204ENST00000378726 POLR1AO95602 1720 aaPredicted RBP26.84■■□□□ 1.89
SSU72-204ENST00000378726 CAMSAP1Q5T5Y3 1602 aa26.84■■□□□ 1.89
SSU72-204ENST00000378726 KIF1BO60333 1816 aa26.83■■□□□ 1.89
SSU72-204ENST00000378726 ARHGAP31Q2M1Z3 1444 aa26.83■■□□□ 1.88
SSU72-204ENST00000378726 NOS1P29475 1434 aa26.82■■□□□ 1.88
SSU72-204ENST00000378726 MADDQ8WXG6 1647 aa26.81■■□□□ 1.88
SSU72-204ENST00000378726 LAMC1P11047 1609 aa26.79■■□□□ 1.88
SSU72-204ENST00000378726 REREQ9P2R6 1566 aa26.78■■□□□ 1.88
SSU72-204ENST00000378726 PPP6R1Q9UPN7 881 aa26.78■■□□□ 1.88
SSU72-204ENST00000378726 ZC3H13Q5T200 1668 aaKnown RBP26.78■■□□□ 1.88
SSU72-204ENST00000378726 ADGRF5Q8IZF2 1346 aa26.78■■□□□ 1.88
SSU72-204ENST00000378726 AGLP35573 1532 aa26.77■■□□□ 1.88
SSU72-204ENST00000378726 SIGLEC1Q9BZZ2 1709 aa26.75■■□□□ 1.87
SSU72-204ENST00000378726 ADGRB3O60242 1522 aa26.74■■□□□ 1.87
SSU72-204ENST00000378726 MYOM2P54296 1465 aa26.74■■□□□ 1.87
SSU72-204ENST00000378726 TESK2Q96S53 571 aa26.74■■□□□ 1.87
SSU72-204ENST00000378726 IDI1Q13907 227 aa26.73■■□□□ 1.87
SSU72-204ENST00000378726 MLECQ14165 292 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms