RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 BRD4O60885 1362 aaPredicted RBP13.34□□□□□ -0.27
ARHGEF39-201ENST00000378387 NCOA2Q15596 1464 aa13.33□□□□□ -0.28
ARHGEF39-201ENST00000378387 DDX11L8A8MPP1 907 aa13.32□□□□□ -0.28
ARHGEF39-201ENST00000378387 KNSTRNQ9Y448 316 aa13.32□□□□□ -0.28
ARHGEF39-201ENST00000378387 GBP4Q96PP9 640 aa13.32□□□□□ -0.28
ARHGEF39-201ENST00000378387 PEG3Q9GZU2 1588 aa13.32□□□□□ -0.28
ARHGEF39-201ENST00000378387 PANK3Q9H999 370 aa13.32□□□□□ -0.28
ARHGEF39-201ENST00000378387 IGHDP01880 384 aa13.31□□□□□ -0.28
ARHGEF39-201ENST00000378387 IGF1RP08069 1367 aa13.31□□□□□ -0.28
ARHGEF39-201ENST00000378387 DDX49Q9Y6V7 483 aaKnown RBP13.31□□□□□ -0.28
ARHGEF39-201ENST00000378387 NASPP49321 788 aaPredicted RBP13.3□□□□□ -0.28
ARHGEF39-201ENST00000378387 MAPK8IP3Q9UPT6 1336 aa13.3□□□□□ -0.28
ARHGEF39-201ENST00000378387 DHX29Q7Z478 1369 aaKnown RBP13.3□□□□□ -0.28
ARHGEF39-201ENST00000378387 APAF1O14727 1248 aa13.29□□□□□ -0.28
ARHGEF39-201ENST00000378387 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.29□□□□□ -0.28
ARHGEF39-201ENST00000378387 NCAPD3P42695 1498 aa13.29□□□□□ -0.28
ARHGEF39-201ENST00000378387 ROCK2O75116 1388 aaKnown RBP13.29□□□□□ -0.28
ARHGEF39-201ENST00000378387 C22orf23Q9BZE7 217 aa13.29□□□□□ -0.28
ARHGEF39-201ENST00000378387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.28□□□□□ -0.286e-6■□□□□ 11
ARHGEF39-201ENST00000378387 UQCRHLA0A096LP55 91 aa13.28□□□□□ -0.28
ARHGEF39-201ENST00000378387 UQCRHP07919 91 aa13.28□□□□□ -0.28
ARHGEF39-201ENST00000378387 XPCQ01831 940 aaPredicted RBP13.28□□□□□ -0.28
ARHGEF39-201ENST00000378387 MPNDQ8N594 471 aa13.28□□□□□ -0.28
ARHGEF39-201ENST00000378387 TOP2BQ02880 1626 aa13.28□□□□□ -0.28
ARHGEF39-201ENST00000378387 ERBB4Q15303 1308 aa13.28□□□□□ -0.28
ARHGEF39-201ENST00000378387 PDE4CQ08493 712 aa13.27□□□□□ -0.28
ARHGEF39-201ENST00000378387 MAPK8IP2Q13387 824 aaPredicted RBP13.27□□□□□ -0.28
ARHGEF39-201ENST00000378387 CDK11BP21127 795 aaKnown RBP13.26□□□□□ -0.29
ARHGEF39-201ENST00000378387 PLCB2Q00722 1185 aa13.26□□□□□ -0.29
ARHGEF39-201ENST00000378387 FTSJ3Q8IY81 847 aaKnown RBP13.26□□□□□ -0.29
ARHGEF39-201ENST00000378387 KDM2BQ8NHM5 1336 aa13.26□□□□□ -0.29
ARHGEF39-201ENST00000378387 ZNF644Q9H582 1327 aaPredicted RBP13.24□□□□□ -0.29
ARHGEF39-201ENST00000378387 ZSCAN30Q86W11 494 aa13.24□□□□□ -0.29
ARHGEF39-201ENST00000378387 PDZRN3Q9UPQ7 1066 aa13.24□□□□□ -0.29
ARHGEF39-201ENST00000378387 RRP7AQ9Y3A4 280 aaKnown RBP13.24□□□□□ -0.29
ARHGEF39-201ENST00000378387 CALD1Q05682 793 aaKnown RBP13.24□□□□□ -0.29
ARHGEF39-201ENST00000378387 BBXQ8WY36 941 aaPredicted RBP13.24□□□□□ -0.29
ARHGEF39-201ENST00000378387 CENPJQ9HC77 1338 aaPredicted RBP13.23□□□□□ -0.29
ARHGEF39-201ENST00000378387 AAMPQ13685 434 aa13.23□□□□□ -0.29
ARHGEF39-201ENST00000378387 FOXD4L5Q5VV16 416 aaPredicted RBP13.23□□□□□ -0.29
ARHGEF39-201ENST00000378387 FOXD4L4Q8WXT5 416 aaPredicted RBP13.23□□□□□ -0.29
ARHGEF39-201ENST00000378387 RWDD1Q9H446 243 aaPredicted RBP13.23□□□□□ -0.29
ARHGEF39-201ENST00000378387 CFTRP13569 1480 aa13.23□□□□□ -0.29
ARHGEF39-201ENST00000378387 MYOM3Q5VTT5 1437 aa13.22□□□□□ -0.29
ARHGEF39-201ENST00000378387 PMFBP1Q8TBY8 1022 aa13.22□□□□□ -0.29
ARHGEF39-201ENST00000378387 DUSP27Q5VZP5 1158 aa13.22□□□□□ -0.29
ARHGEF39-201ENST00000378387 MAP7D2Q96T17 732 aa13.22□□□□□ -0.29
ARHGEF39-201ENST00000378387 CGNL1Q0VF96 1302 aa13.21□□□□□ -0.29
ARHGEF39-201ENST00000378387 FSD2A1L4K1 749 aa13.21□□□□□ -0.3
ARHGEF39-201ENST00000378387 CBX1P83916 185 aa13.21□□□□□ -0.3
ARHGEF39-201ENST00000378387 CCDC173Q0VFZ6 552 aa13.21□□□□□ -0.3
ARHGEF39-201ENST00000378387 RNF214Q8ND24 703 aa13.21□□□□□ -0.3
ARHGEF39-201ENST00000378387 GAS2L3Q86XJ1 694 aa13.2□□□□□ -0.3
ARHGEF39-201ENST00000378387 CUX1P39880 1505 aa13.2□□□□□ -0.3
ARHGEF39-201ENST00000378387 TBC1D32Q96NH3 1257 aa13.2□□□□□ -0.3
ARHGEF39-201ENST00000378387 CAVIN1Q6NZI2 390 aaKnown RBP13.2□□□□□ -0.3
ARHGEF39-201ENST00000378387 PTPN23Q9H3S7 1636 aa13.19□□□□□ -0.3
ARHGEF39-201ENST00000378387 SKOR2Q2VWA4 1001 aaPredicted RBP13.19□□□□□ -0.3
ARHGEF39-201ENST00000378387 CFDP1Q9UEE9 299 aaPredicted RBP13.19□□□□□ -0.3
ARHGEF39-201ENST00000378387 TMF1P82094 1093 aa13.19□□□□□ -0.3
ARHGEF39-201ENST00000378387 TNPO1Q92973 898 aaKnown RBP13.19□□□□□ -0.3
ARHGEF39-201ENST00000378387 ANKRD30BQ9BXX2 1392 aa13.19□□□□□ -0.3
ARHGEF39-201ENST00000378387 IGSF3O75054 1194 aa13.18□□□□□ -0.3
ARHGEF39-201ENST00000378387 LRPPRCP42704 1394 aaKnown RBP13.18□□□□□ -0.3
ARHGEF39-201ENST00000378387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.18□□□□□ -0.3
ARHGEF39-201ENST00000378387 SLC24A1O60721 1099 aa13.18□□□□□ -0.3
ARHGEF39-201ENST00000378387 FGD1P98174 961 aa13.18□□□□□ -0.3
ARHGEF39-201ENST00000378387 MCTP1Q6DN14 999 aa13.18□□□□□ -0.3
ARHGEF39-201ENST00000378387 ANTXR1Q9H6X2 564 aa13.17□□□□□ -0.3
ARHGEF39-201ENST00000378387 NBPF1Q3BBV0 1214 aa13.17□□□□□ -0.3
ARHGEF39-201ENST00000378387 BCL11BQ9C0K0 894 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF39-201ENST00000378387 USP19O94966 1318 aa13.17□□□□□ -0.3
ARHGEF39-201ENST00000378387 FOXD4L6Q3SYB3 417 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF39-201ENST00000378387 FOXD4L3Q6VB84 417 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF39-201ENST00000378387 PCF11O94913 1555 aaKnown RBP13.16□□□□□ -0.3
ARHGEF39-201ENST00000378387 OFD1O75665 1012 aa13.16□□□□□ -0.3
ARHGEF39-201ENST00000378387 ITPRIPQ8IWB1 547 aa13.15□□□□□ -0.3
ARHGEF39-201ENST00000378387 NUP155O75694 1391 aa13.14□□□□□ -0.31
ARHGEF39-201ENST00000378387 CASKIN1Q8WXD9 1431 aa13.14□□□□□ -0.31
ARHGEF39-201ENST00000378387 FAM177BA6PVY3 158 aa13.14□□□□□ -0.31
ARHGEF39-201ENST00000378387 E9PSI1 815 aa13.14□□□□□ -0.31
ARHGEF39-201ENST00000378387 SLFN5Q08AF3 891 aa13.14□□□□□ -0.31
ARHGEF39-201ENST00000378387 MIA2Q96PC5 1412 aa13.14□□□□□ -0.31
ARHGEF39-201ENST00000378387 ZNF771Q7L3S4 317 aaPredicted RBP13.13□□□□□ -0.31
ARHGEF39-201ENST00000378387 SPINK5Q9NQ38 1064 aaPredicted RBP13.13□□□□□ -0.31
ARHGEF39-201ENST00000378387 ISY1Q9ULR0 285 aaKnown RBP13.13□□□□□ -0.31
ARHGEF39-201ENST00000378387 TSC1Q92574 1164 aa13.13□□□□□ -0.31
ARHGEF39-201ENST00000378387 TSPY4P0CV99 314 aa13.12□□□□□ -0.31
ARHGEF39-201ENST00000378387 TSPY10P0CW01 314 aa13.12□□□□□ -0.31
ARHGEF39-201ENST00000378387 LNPKQ9C0E8 428 aa13.12□□□□□ -0.31
ARHGEF39-201ENST00000378387 RIPK4P57078 832 aa13.12□□□□□ -0.31
ARHGEF39-201ENST00000378387 TNNQ9UQP3 1299 aa13.12□□□□□ -0.31
ARHGEF39-201ENST00000378387 SPDYE4A6NLX3 237 aa13.11□□□□□ -0.31
ARHGEF39-201ENST00000378387 SSFA2P28290 1259 aa13.11□□□□□ -0.31
ARHGEF39-201ENST00000378387 KIAA2012Q0VF49 1180 aa13.11□□□□□ -0.31
ARHGEF39-201ENST00000378387 PLCD3Q8N3E9 789 aa13.11□□□□□ -0.31
ARHGEF39-201ENST00000378387 DNAJC5BQ9UF47 199 aa13.11□□□□□ -0.31
ARHGEF39-201ENST00000378387 PCDHB15Q9Y5E8 787 aa13.11□□□□□ -0.31
ARHGEF39-201ENST00000378387 BIVM-ERCC5R4GMW8 1640 aa13.11□□□□□ -0.31
ARHGEF39-201ENST00000378387 PPP2R1AP30153 589 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms