RNA–Protein interactions for RNA: ENST00000378300.9

TPM2-204, Transcript of tropomyosin 2, humanhuman

TSL 3 BASIC

Gene TPM2, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-204ENST00000378300 FOXD1Q16676 465 aa20.7■□□□□ 0.9
TPM2-204ENST00000378300 ACIN1Q9UKV3 1341 aaKnown RBP20.7■□□□□ 0.9
TPM2-204ENST00000378300 EIF2AK4Q9P2K8 1649 aaKnown RBP20.7■□□□□ 0.9
TPM2-204ENST00000378300 KDM5DQ9BY66 1539 aa20.7■□□□□ 0.9
TPM2-204ENST00000378300 ATP10AO60312 1499 aa20.68■□□□□ 0.9
TPM2-204ENST00000378300 DEPDC5O75140 1603 aa20.68■□□□□ 0.9
TPM2-204ENST00000378300 FAM135AQ9P2D6 1515 aa20.67■□□□□ 0.9
TPM2-204ENST00000378300 ARHGEF40Q8TER5 1519 aa20.67■□□□□ 0.9
TPM2-204ENST00000378300 MROH1Q8NDA8 1641 aa20.66■□□□□ 0.9
TPM2-204ENST00000378300 CLSPNQ9HAW4 1339 aa20.65■□□□□ 0.9
TPM2-204ENST00000378300 SIGLEC1Q9BZZ2 1709 aa20.65■□□□□ 0.9
TPM2-204ENST00000378300 IQGAP3Q86VI3 1631 aa20.64■□□□□ 0.9
TPM2-204ENST00000378300 PKD2Q13563 968 aa20.64■□□□□ 0.89
TPM2-204ENST00000378300 BCORL1Q5H9F3 1711 aa20.63■□□□□ 0.89
TPM2-204ENST00000378300 RNF17Q9BXT8 1623 aaKnown RBP20.63■□□□□ 0.89
TPM2-204ENST00000378300 PRDM15P57071 1507 aaPredicted RBP20.62■□□□□ 0.89
TPM2-204ENST00000378300 GGT6Q6P531 493 aa20.62■□□□□ 0.89
TPM2-204ENST00000378300 SIN3AQ96ST3 1273 aa20.62■□□□□ 0.89
TPM2-204ENST00000378300 REREQ9P2R6 1566 aa20.61■□□□□ 0.89
TPM2-204ENST00000378300 VWDEQ8N2E2 1590 aa20.6■□□□□ 0.89
TPM2-204ENST00000378300 ZEB1P37275 1124 aaPredicted RBP20.6■□□□□ 0.89
TPM2-204ENST00000378300 KANK1Q14678 1352 aa20.57■□□□□ 0.88
TPM2-204ENST00000378300 ANKRD30BQ9BXX2 1392 aa20.57■□□□□ 0.88
TPM2-204ENST00000378300 NEUROD1Q13562 356 aa20.57■□□□□ 0.88
TPM2-204ENST00000378300 AGLP35573 1532 aa20.56■□□□□ 0.88
TPM2-204ENST00000378300 CEP152O94986 1710 aa20.55■□□□□ 0.88
TPM2-204ENST00000378300 E9PCH4 1651 aa20.52■□□□□ 0.88
TPM2-204ENST00000378300 TET3O43151 1660 aa20.52■□□□□ 0.88
TPM2-204ENST00000378300 WASHC2CQ9Y4E1 1318 aa20.51■□□□□ 0.87
TPM2-204ENST00000378300 ABCC3O15438 1527 aa20.51■□□□□ 0.87
TPM2-204ENST00000378300 MLECQ14165 292 aa20.51■□□□□ 0.87
TPM2-204ENST00000378300 LMTK2Q8IWU2 1503 aa20.5■□□□□ 0.87
TPM2-204ENST00000378300 ARID4BQ4LE39 1312 aaPredicted RBP20.49■□□□□ 0.87
TPM2-204ENST00000378300 PLA2R1Q13018 1463 aa20.48■□□□□ 0.87
TPM2-204ENST00000378300 EFCAB6Q5THR3 1501 aa20.48■□□□□ 0.87
TPM2-204ENST00000378300 CAMSAP1Q5T5Y3 1602 aa20.45■□□□□ 0.86
TPM2-204ENST00000378300 ZC3H13Q5T200 1668 aaKnown RBP20.44■□□□□ 0.86
TPM2-204ENST00000378300 RPRD2Q5VT52 1461 aaKnown RBP20.43■□□□□ 0.86
TPM2-204ENST00000378300 NPATQ14207 1427 aa20.43■□□□□ 0.86
TPM2-204ENST00000378300 PTPRTO14522 1441 aa20.41■□□□□ 0.86
TPM2-204ENST00000378300 CLTCQ00610 1675 aaKnown RBP20.41■□□□□ 0.86
TPM2-204ENST00000378300 SPHKAPQ2M3C7 1700 aa20.4■□□□□ 0.86
TPM2-204ENST00000378300 CFAP65Q6ZU64 1925 aaKnown RBP20.4■□□□□ 0.86
TPM2-204ENST00000378300 PPP6R1Q9UPN7 881 aa20.39■□□□□ 0.86
TPM2-204ENST00000378300 TONSLQ96HA7 1378 aa20.39■□□□□ 0.85
TPM2-204ENST00000378300 CCDC144AA2RUR9 1427 aa20.38■□□□□ 0.85
TPM2-204ENST00000378300 TRPM2O94759 1503 aa20.37■□□□□ 0.85
TPM2-204ENST00000378300 ARHGAP31Q2M1Z3 1444 aa20.37■□□□□ 0.85
TPM2-204ENST00000378300 UGGT1Q9NYU2 1555 aa20.36■□□□□ 0.85
TPM2-204ENST00000378300 TIMELESSQ9UNS1 1208 aa20.35■□□□□ 0.85
TPM2-204ENST00000378300 CLTCL1P53675 1640 aa20.35■□□□□ 0.85
TPM2-204ENST00000378300 L3MBTL2Q969R5 705 aa20.34■□□□□ 0.85
TPM2-204ENST00000378300 FBXO31Q5XUX0 539 aaPredicted RBP20.34■□□□□ 0.85
TPM2-204ENST00000378300 ESF1Q9H501 851 aaKnown RBP20.33■□□□□ 0.84
TPM2-204ENST00000378300 NOS1P29475 1434 aa20.32■□□□□ 0.84
TPM2-204ENST00000378300 ZMYM3Q14202 1370 aa20.3■□□□□ 0.84
TPM2-204ENST00000378300 PREX1Q8TCU6 1659 aa20.3■□□□□ 0.84
TPM2-204ENST00000378300 SYNMO15061 1565 aa20.3■□□□□ 0.84
TPM2-204ENST00000378300 PPP1R15AO75807 674 aaPredicted RBP20.3■□□□□ 0.84
TPM2-204ENST00000378300 CNTLNQ9NXG0 1405 aa20.29■□□□□ 0.84
TPM2-204ENST00000378300 RGL3Q3MIN7 710 aa20.28■□□□□ 0.84
TPM2-204ENST00000378300 ERVK-7P63135 1459 aa20.27■□□□□ 0.84
TPM2-204ENST00000378300 FER1L4A9Z1Z3 1794 aa20.27■□□□□ 0.84
TPM2-204ENST00000378300 SPATA31E1Q6ZUB1 1445 aa20.26■□□□□ 0.83
TPM2-204ENST00000378300 CEBPAP49715 358 aaPredicted RBP20.25■□□□□ 0.83
TPM2-204ENST00000378300 MROH2AA6NES4 1674 aa20.24■□□□□ 0.83
TPM2-204ENST00000378300 PIK3C2BO00750 1634 aa20.23■□□□□ 0.83
TPM2-204ENST00000378300 MADDQ8WXG6 1647 aa20.23■□□□□ 0.83
TPM2-204ENST00000378300 SPATA31D1Q6ZQQ2 1576 aa20.23■□□□□ 0.83
TPM2-204ENST00000378300 IDI1Q13907 227 aa20.22■□□□□ 0.83
TPM2-204ENST00000378300 DCAF11Q8TEB1 546 aa20.22■□□□□ 0.83
TPM2-204ENST00000378300 KIF1BO60333 1816 aa20.21■□□□□ 0.83
TPM2-204ENST00000378300 ADAMTSL3P82987 1691 aa20.21■□□□□ 0.83
TPM2-204ENST00000378300 PLPPR3Q6T4P5 718 aa20.21■□□□□ 0.83
TPM2-204ENST00000378300 KDM2AQ9Y2K7 1162 aa20.21■□□□□ 0.83
TPM2-204ENST00000378300 C3P01024 1663 aa20.2■□□□□ 0.82
TPM2-204ENST00000378300 CHGAP10645 457 aaKnown RBP20.2■□□□□ 0.82
TPM2-204ENST00000378300 NBPF8Q3BBV2 869 aa20.2■□□□□ 0.82
TPM2-204ENST00000378300 RIMS1Q86UR5 1692 aaKnown RBP20.19■□□□□ 0.82
TPM2-204ENST00000378300 ADGRB3O60242 1522 aa20.18■□□□□ 0.82
TPM2-204ENST00000378300 SLC52A1Q9NWF4 448 aa20.18■□□□□ 0.82
TPM2-204ENST00000378300 ZNF326Q5BKZ1 582 aaKnown RBP20.17■□□□□ 0.82
TPM2-204ENST00000378300 NEURL4Q96JN8 1562 aa20.15■□□□□ 0.82
TPM2-204ENST00000378300 TNRQ92752 1358 aa20.14■□□□□ 0.81
TPM2-204ENST00000378300 MYO5BQ9ULV0 1848 aa20.13■□□□□ 0.81
TPM2-204ENST00000378300 TMEM131LA2VDJ0 1609 aa20.13■□□□□ 0.81
TPM2-204ENST00000378300 UHRF1BP1Q6BDS2 1440 aa20.11■□□□□ 0.81
TPM2-204ENST00000378300 PRAG1Q86YV5 1406 aa20.1■□□□□ 0.81
TPM2-204ENST00000378300 IFT172Q9UG01 1749 aa20.09■□□□□ 0.81
TPM2-204ENST00000378300 NUTM2DQ5VT03 806 aaPredicted RBP20.07■□□□□ 0.8
TPM2-204ENST00000378300 STAG3Q9UJ98 1225 aa20.07■□□□□ 0.8
TPM2-204ENST00000378300 PPLO60437 1756 aa20.07■□□□□ 0.8
TPM2-204ENST00000378300 A2ML1A8K2U0 1454 aa20.06■□□□□ 0.8
TPM2-204ENST00000378300 ADGRF5Q8IZF2 1346 aa20.06■□□□□ 0.8
TPM2-204ENST00000378300 NEXMIFQ5QGS0 1516 aa20.05■□□□□ 0.8
TPM2-204ENST00000378300 PTPRMP28827 1452 aa20.04■□□□□ 0.8
TPM2-204ENST00000378300 MYOM2P54296 1465 aa20.04■□□□□ 0.8
TPM2-204ENST00000378300 RPGRIP1LQ68CZ1 1315 aa20.03■□□□□ 0.8
TPM2-204ENST00000378300 NLRP1Q9C000 1473 aa20.03■□□□□ 0.8
TPM2-204ENST00000378300 TRPM1Q7Z4N2 1603 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms