RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 RRBP1Q9P2E9 1410 aaKnown RBP10.98□□□□□ -0.65
CKAP2-203ENST00000378037 MAST1Q9Y2H9 1570 aa10.97□□□□□ -0.65
CKAP2-203ENST00000378037 CDC42BPBQ9Y5S2 1711 aa10.97□□□□□ -0.65
CKAP2-203ENST00000378037 B4GALNT3Q6L9W6 998 aa10.97□□□□□ -0.65
CKAP2-203ENST00000378037 CLSPNQ9HAW4 1339 aa10.97□□□□□ -0.65
CKAP2-203ENST00000378037 FAM69CQ0P6D2 419 aa10.97□□□□□ -0.65
CKAP2-203ENST00000378037 MROH2AA6NES4 1674 aa10.96□□□□□ -0.65
CKAP2-203ENST00000378037 CROCC2H7BZ55 1655 aa10.96□□□□□ -0.66
CKAP2-203ENST00000378037 KIF15Q9NS87 1388 aa10.96□□□□□ -0.66
CKAP2-203ENST00000378037 PRKCSHP14314 528 aaPredicted RBP10.95□□□□□ -0.66
CKAP2-203ENST00000378037 WASHC2CQ9Y4E1 1318 aa10.95□□□□□ -0.66
CKAP2-203ENST00000378037 ROCK2O75116 1388 aaKnown RBP10.95□□□□□ -0.66
CKAP2-203ENST00000378037 TEX14Q8IWB6 1497 aa10.95□□□□□ -0.66
CKAP2-203ENST00000378037 WASHC2AQ641Q2 1341 aa10.94□□□□□ -0.66
CKAP2-203ENST00000378037 CANXP27824 592 aaKnown RBP10.93□□□□□ -0.66
CKAP2-203ENST00000378037 CCDC146Q8IYE0 955 aa10.92□□□□□ -0.66
CKAP2-203ENST00000378037 ADAMTSL3P82987 1691 aa10.92□□□□□ -0.66
CKAP2-203ENST00000378037 ARHGEF40Q8TER5 1519 aa10.92□□□□□ -0.66
CKAP2-203ENST00000378037 LMOD2Q6P5Q4 547 aa10.92□□□□□ -0.66
CKAP2-203ENST00000378037 ATP10BO94823 1461 aa10.91□□□□□ -0.66
CKAP2-203ENST00000378037 KNSTRNQ9Y448 316 aa10.91□□□□□ -0.66
CKAP2-203ENST00000378037 NAIPQ13075 1403 aa10.91□□□□□ -0.66
CKAP2-203ENST00000378037 SRPK2P78362 688 aaKnown RBP10.91□□□□□ -0.66
CKAP2-203ENST00000378037 POGKQ9P215 609 aa10.91□□□□□ -0.66
CKAP2-203ENST00000378037 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.91□□□□□ -0.66
CKAP2-203ENST00000378037 INO80Q9ULG1 1556 aaPredicted RBP10.91□□□□□ -0.66
CKAP2-203ENST00000378037 ANKRD50Q9ULJ7 1429 aa10.9□□□□□ -0.66
CKAP2-203ENST00000378037 KIF14Q15058 1648 aa10.9□□□□□ -0.66
CKAP2-203ENST00000378037 WDR43Q15061 677 aaKnown RBP eCLIP10.9□□□□□ -0.66
CKAP2-203ENST00000378037 ARHGEF5Q12774 1597 aa10.9□□□□□ -0.66
CKAP2-203ENST00000378037 PLXNC1O60486 1568 aa10.9□□□□□ -0.66
CKAP2-203ENST00000378037 MAGI2Q86UL8 1455 aa10.9□□□□□ -0.67
CKAP2-203ENST00000378037 SCAPERQ9BY12 1400 aa10.89□□□□□ -0.67
CKAP2-203ENST00000378037 TTC37Q6PGP7 1564 aa10.89□□□□□ -0.67
CKAP2-203ENST00000378037 EIF2AK4Q9P2K8 1649 aaKnown RBP10.89□□□□□ -0.67
CKAP2-203ENST00000378037 CFAP70Q5T0N1 1121 aa10.89□□□□□ -0.67
CKAP2-203ENST00000378037 U2SURPO15042 1029 aaKnown RBP10.88□□□□□ -0.67
CKAP2-203ENST00000378037 RRP7AQ9Y3A4 280 aaKnown RBP10.88□□□□□ -0.67
CKAP2-203ENST00000378037 EHBP1L1Q8N3D4 1523 aa10.88□□□□□ -0.67
CKAP2-203ENST00000378037 RBM33Q96EV2 1170 aaKnown RBP10.88□□□□□ -0.67
CKAP2-203ENST00000378037 LAS1LQ9Y4W2 734 aaKnown RBP10.88□□□□□ -0.67
CKAP2-203ENST00000378037 ADGBQ8N7X0 1667 aa10.88□□□□□ -0.67
CKAP2-203ENST00000378037 KIF7Q2M1P5 1343 aa10.87□□□□□ -0.67
CKAP2-203ENST00000378037 PANK3Q9H999 370 aa10.87□□□□□ -0.67
CKAP2-203ENST00000378037 ASXL2Q76L83 1435 aa10.87□□□□□ -0.67
CKAP2-203ENST00000378037 AGLP35573 1532 aa10.87□□□□□ -0.67
CKAP2-203ENST00000378037 CCDC136Q96JN2 1154 aa10.86□□□□□ -0.67
CKAP2-203ENST00000378037 KDM5AP29375 1690 aaKnown RBP10.86□□□□□ -0.67
CKAP2-203ENST00000378037 USP47Q96K76 1375 aa10.86□□□□□ -0.67
CKAP2-203ENST00000378037 KDM6BO15054 1643 aa10.86□□□□□ -0.67
CKAP2-203ENST00000378037 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.85□□□□□ -0.67
CKAP2-203ENST00000378037 ABCC1P33527 1531 aa10.85□□□□□ -0.67
CKAP2-203ENST00000378037 ARHGAP5Q13017 1502 aa10.85□□□□□ -0.67
CKAP2-203ENST00000378037 PLIN1O60240 522 aa10.85□□□□□ -0.67
CKAP2-203ENST00000378037 MINK1Q8N4C8 1332 aaPredicted RBP10.84□□□□□ -0.67
CKAP2-203ENST00000378037 PRKRIP1Q9H875 184 aaPredicted RBP10.84□□□□□ -0.67
CKAP2-203ENST00000378037 CCDC144AA2RUR9 1427 aa10.84□□□□□ -0.67
CKAP2-203ENST00000378037 TROQ12816 1431 aaPredicted RBP10.84□□□□□ -0.67
CKAP2-203ENST00000378037 ZC3H13Q5T200 1668 aaKnown RBP10.84□□□□□ -0.67
CKAP2-203ENST00000378037 A0A0G2JS52 829 aa10.84□□□□□ -0.67
CKAP2-203ENST00000378037 ABCC5O15440 1437 aa10.83□□□□□ -0.68
CKAP2-203ENST00000378037 DEPDC5O75140 1603 aa10.83□□□□□ -0.68
CKAP2-203ENST00000378037 RNF17Q9BXT8 1623 aaKnown RBP10.83□□□□□ -0.68
CKAP2-203ENST00000378037 TMF1P82094 1093 aa10.83□□□□□ -0.68
CKAP2-203ENST00000378037 FRAT1Q92837 279 aaPredicted RBP10.83□□□□□ -0.68
CKAP2-203ENST00000378037 DAPK1P53355 1430 aa10.83□□□□□ -0.68
CKAP2-203ENST00000378037 SUPT6HQ7KZ85 1726 aaKnown RBP10.82□□□□□ -0.68
CKAP2-203ENST00000378037 C9orf84Q5VXU9 1444 aa10.82□□□□□ -0.68
CKAP2-203ENST00000378037 ZNF142P52746 1687 aaPredicted RBP10.81□□□□□ -0.68
CKAP2-203ENST00000378037 HFM1A2PYH4 1435 aa10.81□□□□□ -0.68
CKAP2-203ENST00000378037 SIGLEC1Q9BZZ2 1709 aa10.81□□□□□ -0.68
CKAP2-203ENST00000378037 BCL2L13Q9BXK5 485 aa10.81□□□□□ -0.68
CKAP2-203ENST00000378037 FBXO31Q5XUX0 539 aaPredicted RBP10.81□□□□□ -0.68
CKAP2-203ENST00000378037 CEBPAP49715 358 aaPredicted RBP10.79□□□□□ -0.68
CKAP2-203ENST00000378037 KANK1Q14678 1352 aa10.79□□□□□ -0.68
CKAP2-203ENST00000378037 FBLN1P23142 703 aa10.78□□□□□ -0.68
CKAP2-203ENST00000378037 CABP2Q9NPB3 220 aa10.78□□□□□ -0.68
CKAP2-203ENST00000378037 TIMELESSQ9UNS1 1208 aa10.78□□□□□ -0.68
CKAP2-203ENST00000378037 HECW2Q9P2P5 1572 aa10.78□□□□□ -0.68
CKAP2-203ENST00000378037 TCOF1Q13428 1488 aaKnown RBP10.78□□□□□ -0.68
CKAP2-203ENST00000378037 TCERG1O14776 1098 aaKnown RBP10.77□□□□□ -0.68
CKAP2-203ENST00000378037 KIDINS220Q9ULH0 1771 aa10.77□□□□□ -0.68
CKAP2-203ENST00000378037 NUTM2GQ5VZR2 741 aa10.77□□□□□ -0.69
CKAP2-203ENST00000378037 CDCA7LQ96GN5 454 aa10.77□□□□□ -0.69
CKAP2-203ENST00000378037 SAMD9LQ8IVG5 1584 aa10.77□□□□□ -0.69
CKAP2-203ENST00000378037 MORC1Q86VD1 984 aa10.76□□□□□ -0.69
CKAP2-203ENST00000378037 CLUAP1Q96AJ1 413 aa10.76□□□□□ -0.69
CKAP2-203ENST00000378037 KDM5DQ9BY66 1539 aa10.76□□□□□ -0.69
CKAP2-203ENST00000378037 KIAA1107Q9UPP5 1409 aa10.76□□□□□ -0.69
CKAP2-203ENST00000378037 PAK3O75914 559 aaPredicted RBP10.76□□□□□ -0.69
CKAP2-203ENST00000378037 RGS3P49796 1198 aa10.76□□□□□ -0.69
CKAP2-203ENST00000378037 SLC12A5Q9H2X9 1139 aa10.76□□□□□ -0.69
CKAP2-203ENST00000378037 ARHGEF12Q9NZN5 1544 aa10.76□□□□□ -0.69
CKAP2-203ENST00000378037 CAMSAP2Q08AD1 1489 aa10.76□□□□□ -0.69
CKAP2-203ENST00000378037 MLH3Q9UHC1 1453 aa10.76□□□□□ -0.69
CKAP2-203ENST00000378037 NBR1Q14596 966 aa10.76□□□□□ -0.69
CKAP2-203ENST00000378037 SKAP1Q86WV1 359 aa10.76□□□□□ -0.69
CKAP2-203ENST00000378037 SHANK2Q9UPX8 1470 aa10.75□□□□□ -0.69
CKAP2-203ENST00000378037 FER1L4A9Z1Z3 1794 aa10.75□□□□□ -0.69
CKAP2-203ENST00000378037 ELL2O00472 640 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms