RNA–Protein interactions for RNA: ENST00000377885.6

RNF38-206, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 4,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-206ENST00000377885 SLC4A3P48751 1232 aa12.96□□□□□ -0.33
RNF38-206ENST00000377885 CDCA8Q53HL2 280 aa12.96□□□□□ -0.33
RNF38-206ENST00000377885 CDCA7LQ96GN5 454 aa12.96□□□□□ -0.33
RNF38-206ENST00000377885 ARHGEF11O15085 1522 aa12.96□□□□□ -0.34
RNF38-206ENST00000377885 WDR62O43379 1518 aa12.96□□□□□ -0.34
RNF38-206ENST00000377885 IQGAP2Q13576 1575 aa12.95□□□□□ -0.34
RNF38-206ENST00000377885 WASHC2CQ9Y4E1 1318 aa12.94□□□□□ -0.34
RNF38-206ENST00000377885 KDM6BO15054 1643 aa12.94□□□□□ -0.34
RNF38-206ENST00000377885 GOLGA2Q08379 1002 aa12.94□□□□□ -0.34
RNF38-206ENST00000377885 GLIPR1L2Q4G1C9 344 aa12.94□□□□□ -0.34
RNF38-206ENST00000377885 ABCA5Q8WWZ7 1642 aa12.94□□□□□ -0.34
RNF38-206ENST00000377885 MAGI3Q5TCQ9 1506 aa12.94□□□□□ -0.34
RNF38-206ENST00000377885 LRPPRCP42704 1394 aaKnown RBP12.93□□□□□ -0.34
RNF38-206ENST00000377885 L1TD1Q5T7N2 865 aaKnown RBP12.93□□□□□ -0.34
RNF38-206ENST00000377885 BRPF3Q9ULD4 1205 aa12.93□□□□□ -0.34
RNF38-206ENST00000377885 FRAT1Q92837 279 aaPredicted RBP12.92□□□□□ -0.34
RNF38-206ENST00000377885 PANK3Q9H999 370 aa12.92□□□□□ -0.34
RNF38-206ENST00000377885 DENND4BO75064 1496 aaPredicted RBP12.92□□□□□ -0.34
RNF38-206ENST00000377885 RALGAPBQ86X10 1494 aa12.92□□□□□ -0.34
RNF38-206ENST00000377885 RSPH6AQ9H0K4 717 aa12.91□□□□□ -0.34
RNF38-206ENST00000377885 CCDC144AA2RUR9 1427 aa12.91□□□□□ -0.34
RNF38-206ENST00000377885 DNMT1P26358 1616 aaKnown RBP12.9□□□□□ -0.34
RNF38-206ENST00000377885 TROQ12816 1431 aaPredicted RBP12.9□□□□□ -0.34
RNF38-206ENST00000377885 CAMSAP2Q08AD1 1489 aa12.9□□□□□ -0.35
RNF38-206ENST00000377885 KIF14Q15058 1648 aa12.89□□□□□ -0.35
RNF38-206ENST00000377885 PLEKHH2Q8IVE3 1493 aa12.88□□□□□ -0.35
RNF38-206ENST00000377885 PZPP20742 1482 aa12.88□□□□□ -0.35
RNF38-206ENST00000377885 CARMIL2Q6F5E8 1435 aa12.88□□□□□ -0.35
RNF38-206ENST00000377885 ARXQ96QS3 562 aa12.87□□□□□ -0.35
RNF38-206ENST00000377885 PRG4Q92954 1404 aaPredicted RBP12.86□□□□□ -0.35
RNF38-206ENST00000377885 UHRF1BP1Q6BDS2 1440 aa12.86□□□□□ -0.35
RNF38-206ENST00000377885 EIF3AQ14152 1382 aaKnown RBP12.86□□□□□ -0.35
RNF38-206ENST00000377885 POLR1AO95602 1720 aaPredicted RBP12.85□□□□□ -0.35
RNF38-206ENST00000377885 ZNF608Q9ULD9 1512 aaPredicted RBP12.85□□□□□ -0.35
RNF38-206ENST00000377885 PARD3Q8TEW0 1356 aa12.85□□□□□ -0.35
RNF38-206ENST00000377885 ADAMTS8Q9UP79 889 aa12.84□□□□□ -0.35
RNF38-206ENST00000377885 FRAT2O75474 233 aaPredicted RBP12.84□□□□□ -0.35
RNF38-206ENST00000377885 HNRNPMP52272 730 aaKnown RBP eCLIP12.84□□□□□ -0.35
RNF38-206ENST00000377885 MAPK8IP3Q9UPT6 1336 aa12.84□□□□□ -0.35
RNF38-206ENST00000377885 RSPH4AQ5TD94 716 aa12.84□□□□□ -0.35
RNF38-206ENST00000377885 C9orf84Q5VXU9 1444 aa12.84□□□□□ -0.35
RNF38-206ENST00000377885 ARHGEF12Q9NZN5 1544 aa12.84□□□□□ -0.35
RNF38-206ENST00000377885 FAM43AQ8N2R8 423 aa12.83□□□□□ -0.36
RNF38-206ENST00000377885 SLKQ9H2G2 1235 aaPredicted RBP12.83□□□□□ -0.36
RNF38-206ENST00000377885 LRRIQ1Q96JM4 1722 aa12.83□□□□□ -0.36
RNF38-206ENST00000377885 KDM5CP41229 1560 aa12.83□□□□□ -0.36
RNF38-206ENST00000377885 SKAP1Q86WV1 359 aa12.82□□□□□ -0.36
RNF38-206ENST00000377885 CGNL1Q0VF96 1302 aa12.82□□□□□ -0.36
RNF38-206ENST00000377885 MBD5Q9P267 1494 aa12.81□□□□□ -0.36
RNF38-206ENST00000377885 KIAA0586Q9BVV6 1533 aa12.81□□□□□ -0.36
RNF38-206ENST00000377885 E9PSI1 815 aa12.81□□□□□ -0.36
RNF38-206ENST00000377885 SLC24A1O60721 1099 aa12.81□□□□□ -0.36
RNF38-206ENST00000377885 C20orf194Q5TEA3 1177 aa12.81□□□□□ -0.36
RNF38-206ENST00000377885 NBPF1Q3BBV0 1214 aa12.8□□□□□ -0.36
RNF38-206ENST00000377885 PMFBP1Q8TBY8 1022 aa12.8□□□□□ -0.36
RNF38-206ENST00000377885 NAP1L5Q96NT1 182 aaPredicted RBP12.8□□□□□ -0.36
RNF38-206ENST00000377885 ITSN2Q9NZM3 1697 aa12.8□□□□□ -0.36
RNF38-206ENST00000377885 CCDC146Q8IYE0 955 aa12.8□□□□□ -0.36
RNF38-206ENST00000377885 INSRP06213 1382 aa12.79□□□□□ -0.36
RNF38-206ENST00000377885 ERBINQ96RT1 1412 aa12.79□□□□□ -0.36
RNF38-206ENST00000377885 CENPJQ9HC77 1338 aaPredicted RBP12.79□□□□□ -0.36
RNF38-206ENST00000377885 NGEFQ8N5V2 710 aa12.79□□□□□ -0.36
RNF38-206ENST00000377885 NUP153P49790 1475 aaKnown RBP12.78□□□□□ -0.36
RNF38-206ENST00000377885 GPATCH8Q9UKJ3 1502 aaKnown RBP12.78□□□□□ -0.36
RNF38-206ENST00000377885 BCORL1Q5H9F3 1711 aa12.78□□□□□ -0.36
RNF38-206ENST00000377885 GOLGA6L3A6NEY3 463 aa12.78□□□□□ -0.36
RNF38-206ENST00000377885 PPP2R1AP30153 589 aa12.78□□□□□ -0.36
RNF38-206ENST00000377885 ADGRL2O95490 1459 aa12.78□□□□□ -0.36
RNF38-206ENST00000377885 OSCARQ8IYS5 282 aa12.78□□□□□ -0.36
RNF38-206ENST00000377885 RAPGEF6Q8TEU7 1601 aa12.77□□□□□ -0.36
RNF38-206ENST00000377885 ANP32BQ92688 251 aaKnown RBP12.77□□□□□ -0.37
RNF38-206ENST00000377885 HSP90AA1P07900 732 aaKnown RBP12.76□□□□□ -0.37
RNF38-206ENST00000377885 TRIM44Q96DX7 344 aaPredicted RBP12.76□□□□□ -0.37
RNF38-206ENST00000377885 RWDD1Q9H446 243 aaPredicted RBP12.76□□□□□ -0.37
RNF38-206ENST00000377885 TARBP1Q13395 1621 aaKnown RBP12.76□□□□□ -0.37
RNF38-206ENST00000377885 APAF1O14727 1248 aa12.76□□□□□ -0.37
RNF38-206ENST00000377885 ADGBQ8N7X0 1667 aa12.75□□□□□ -0.37
RNF38-206ENST00000377885 PNNQ9H307 717 aaKnown RBP12.75□□□□□ -0.37
RNF38-206ENST00000377885 MAGI1Q96QZ7 1491 aaPredicted RBP12.75□□□□□ -0.37
RNF38-206ENST00000377885 C8orf34Q49A92 452 aa12.75□□□□□ -0.37
RNF38-206ENST00000377885 DUSP27Q5VZP5 1158 aa12.75□□□□□ -0.37
RNF38-206ENST00000377885 NEUROD2Q15784 382 aa12.75□□□□□ -0.37
RNF38-206ENST00000377885 KDM2BQ8NHM5 1336 aa12.75□□□□□ -0.37
RNF38-206ENST00000377885 JPH4Q96JJ6 628 aa12.74□□□□□ -0.37
RNF38-206ENST00000377885 BLMP54132 1417 aaPredicted RBP12.74□□□□□ -0.37
RNF38-206ENST00000377885 PER1O15534 1290 aaPredicted RBP12.74□□□□□ -0.37
RNF38-206ENST00000377885 FTSJ3Q8IY81 847 aaKnown RBP12.74□□□□□ -0.37
RNF38-206ENST00000377885 SLFN5Q08AF3 891 aa12.74□□□□□ -0.37
RNF38-206ENST00000377885 CLUAP1Q96AJ1 413 aa12.74□□□□□ -0.37
RNF38-206ENST00000377885 ADAMTS12P58397 1594 aa12.73□□□□□ -0.37
RNF38-206ENST00000377885 EIF4G3O43432 1585 aaKnown RBP12.73□□□□□ -0.37
RNF38-206ENST00000377885 AAMPQ13685 434 aa12.73□□□□□ -0.37
RNF38-206ENST00000377885 PDE3AQ14432 1141 aa12.73□□□□□ -0.37
RNF38-206ENST00000377885 HSCBQ8IWL3 235 aa12.73□□□□□ -0.37
RNF38-206ENST00000377885 CFAP53Q96M91 514 aa12.73□□□□□ -0.37
RNF38-206ENST00000377885 COG6Q9Y2V7 657 aa12.73□□□□□ -0.37
RNF38-206ENST00000377885 KIAA0556O60303 1618 aa12.72□□□□□ -0.37
RNF38-206ENST00000377885 ZMYM4Q5VZL5 1548 aa12.72□□□□□ -0.37
RNF38-206ENST00000377885 PRAG1Q86YV5 1406 aa12.72□□□□□ -0.37
RNF38-206ENST00000377885 SPRYD3Q8NCJ5 442 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms