RNA–Protein interactions for RNA: ENST00000376909.6

SSX9-201, Transcript of Protein SSX9, humanhuman

BASIC

Gene SSX9, Length 591 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-201ENST00000376909 AFAP1Q8N556 730 aa11.5□□□□□ -0.57
SSX9-201ENST00000376909 CROCC2H7BZ55 1655 aa11.49□□□□□ -0.57
SSX9-201ENST00000376909 SSUH2Q9Y2M2 353 aa11.49□□□□□ -0.57
SSX9-201ENST00000376909 SPAG9O60271 1321 aaKnown RBP11.49□□□□□ -0.57
SSX9-201ENST00000376909 ACIN1Q9UKV3 1341 aaKnown RBP11.49□□□□□ -0.57
SSX9-201ENST00000376909 REM2Q8IYK8 340 aaPredicted RBP11.48□□□□□ -0.57
SSX9-201ENST00000376909 KIF15Q9NS87 1388 aa11.48□□□□□ -0.57
SSX9-201ENST00000376909 MAST1Q9Y2H9 1570 aa11.48□□□□□ -0.57
SSX9-201ENST00000376909 ADGBQ8N7X0 1667 aa11.47□□□□□ -0.57
SSX9-201ENST00000376909 RTEL1-TNFRSF6BF6WH68 1400 aa11.47□□□□□ -0.57
SSX9-201ENST00000376909 GCC2Q8IWJ2 1684 aa11.46□□□□□ -0.57
SSX9-201ENST00000376909 TEX14Q8IWB6 1497 aa11.46□□□□□ -0.57
SSX9-201ENST00000376909 DHX57Q6P158 1386 aaKnown RBP11.46□□□□□ -0.57
SSX9-201ENST00000376909 DENND4BO75064 1496 aaPredicted RBP11.45□□□□□ -0.58
SSX9-201ENST00000376909 ZNF518AQ6AHZ1 1483 aa11.45□□□□□ -0.58
SSX9-201ENST00000376909 POGZQ7Z3K3 1410 aa11.45□□□□□ -0.58
SSX9-201ENST00000376909 ANKRD50Q9ULJ7 1429 aa11.45□□□□□ -0.58
SSX9-201ENST00000376909 ZEB1P37275 1124 aaPredicted RBP11.45□□□□□ -0.58
SSX9-201ENST00000376909 TRIM52Q96A61 297 aa11.45□□□□□ -0.58
SSX9-201ENST00000376909 MYT1LQ9UL68 1186 aa11.45□□□□□ -0.58
SSX9-201ENST00000376909 RAPGEF3O95398 923 aa11.43□□□□□ -0.58
SSX9-201ENST00000376909 PLXNC1O60486 1568 aa11.42□□□□□ -0.58
SSX9-201ENST00000376909 CLSPNQ9HAW4 1339 aa11.42□□□□□ -0.58
SSX9-201ENST00000376909 KDM6BO15054 1643 aa11.42□□□□□ -0.58
SSX9-201ENST00000376909 ZFYVE16Q7Z3T8 1539 aa11.41□□□□□ -0.58
SSX9-201ENST00000376909 CHRDL2Q6WN34 429 aa11.41□□□□□ -0.58
SSX9-201ENST00000376909 ATP7AQ04656 1500 aa11.4□□□□□ -0.58
SSX9-201ENST00000376909 DUOX2Q9NRD8 1548 aa11.4□□□□□ -0.58
SSX9-201ENST00000376909 KIF13AQ9H1H9 1805 aa11.4□□□□□ -0.58
SSX9-201ENST00000376909 MLH3Q9UHC1 1453 aa11.4□□□□□ -0.58
SSX9-201ENST00000376909 KDM5CP41229 1560 aa11.4□□□□□ -0.58
SSX9-201ENST00000376909 PPRC1Q5VV67 1664 aaKnown RBP11.4□□□□□ -0.59
SSX9-201ENST00000376909 ERBINQ96RT1 1412 aa11.39□□□□□ -0.59
SSX9-201ENST00000376909 MPHOSPH9Q99550 1183 aa11.39□□□□□ -0.59
SSX9-201ENST00000376909 INO80Q9ULG1 1556 aaPredicted RBP11.39□□□□□ -0.59
SSX9-201ENST00000376909 TSPOAP1O95153 1857 aa11.38□□□□□ -0.59
SSX9-201ENST00000376909 SPDYE1Q8NFV5 336 aaPredicted RBP11.37□□□□□ -0.59
SSX9-201ENST00000376909 NUP155O75694 1391 aa11.37□□□□□ -0.59
SSX9-201ENST00000376909 DHX29Q7Z478 1369 aaKnown RBP11.37□□□□□ -0.59
SSX9-201ENST00000376909 HECW2Q9P2P5 1572 aa11.37□□□□□ -0.59
SSX9-201ENST00000376909 SPDYE4A6NLX3 237 aa11.35□□□□□ -0.59
SSX9-201ENST00000376909 KIDINS220Q9ULH0 1771 aa11.35□□□□□ -0.59
SSX9-201ENST00000376909 FRMPD1Q5SYB0 1578 aa11.34□□□□□ -0.59
SSX9-201ENST00000376909 A2MP01023 1474 aa11.34□□□□□ -0.59
SSX9-201ENST00000376909 MAGI2Q86UL8 1455 aa11.34□□□□□ -0.59
SSX9-201ENST00000376909 RICTORQ6R327 1708 aa11.34□□□□□ -0.59
SSX9-201ENST00000376909 ZMYM4Q5VZL5 1548 aa11.34□□□□□ -0.59
SSX9-201ENST00000376909 PZPP20742 1482 aa11.33□□□□□ -0.6
SSX9-201ENST00000376909 PITPNM1O00562 1244 aa11.33□□□□□ -0.6
SSX9-201ENST00000376909 KIF3BO15066 747 aa11.33□□□□□ -0.6
SSX9-201ENST00000376909 POTEHQ6S545 545 aa11.33□□□□□ -0.6
SSX9-201ENST00000376909 KDM5DQ9BY66 1539 aa11.33□□□□□ -0.6
SSX9-201ENST00000376909 COL17A1Q9UMD9 1497 aaPredicted RBP11.32□□□□□ -0.6
SSX9-201ENST00000376909 YEATS2Q9ULM3 1422 aa11.32□□□□□ -0.6
SSX9-201ENST00000376909 PKD2Q13563 968 aa11.31□□□□□ -0.6
SSX9-201ENST00000376909 UNC13BO14795 1591 aa11.31□□□□□ -0.6
SSX9-201ENST00000376909 KANK1Q14678 1352 aa11.3□□□□□ -0.6
SSX9-201ENST00000376909 DIP2CQ9Y2E4 1556 aa11.3□□□□□ -0.6
SSX9-201ENST00000376909 SIN3AQ96ST3 1273 aa11.3□□□□□ -0.6
SSX9-201ENST00000376909 ABCA6Q8N139 1617 aa11.3□□□□□ -0.6
SSX9-201ENST00000376909 EIF2AK4Q9P2K8 1649 aaKnown RBP11.29□□□□□ -0.6
SSX9-201ENST00000376909 NEUROD1Q13562 356 aa11.29□□□□□ -0.6
SSX9-201ENST00000376909 ATP10AO60312 1499 aa11.29□□□□□ -0.6
SSX9-201ENST00000376909 FAM135AQ9P2D6 1515 aa11.29□□□□□ -0.6
SSX9-201ENST00000376909 ANKRD30BQ9BXX2 1392 aa11.28□□□□□ -0.6
SSX9-201ENST00000376909 GGT6Q6P531 493 aa11.26□□□□□ -0.61
SSX9-201ENST00000376909 IQGAP3Q86VI3 1631 aa11.26□□□□□ -0.61
SSX9-201ENST00000376909 DEPDC5O75140 1603 aa11.25□□□□□ -0.61
SSX9-201ENST00000376909 TIMELESSQ9UNS1 1208 aa11.25□□□□□ -0.61
SSX9-201ENST00000376909 PRDM15P57071 1507 aaPredicted RBP11.25□□□□□ -0.61
SSX9-201ENST00000376909 ARHGEF40Q8TER5 1519 aa11.24□□□□□ -0.61
SSX9-201ENST00000376909 VWDEQ8N2E2 1590 aa11.24□□□□□ -0.61
SSX9-201ENST00000376909 REREQ9P2R6 1566 aa11.24□□□□□ -0.61
SSX9-201ENST00000376909 RNF17Q9BXT8 1623 aaKnown RBP11.24□□□□□ -0.61
SSX9-201ENST00000376909 STAG3Q9UJ98 1225 aa11.23□□□□□ -0.61
SSX9-201ENST00000376909 CLEC11AQ9Y240 323 aa11.23□□□□□ -0.61
SSX9-201ENST00000376909 MROH1Q8NDA8 1641 aa11.23□□□□□ -0.61
SSX9-201ENST00000376909 BCORL1Q5H9F3 1711 aa11.23□□□□□ -0.61
SSX9-201ENST00000376909 AGLP35573 1532 aa11.22□□□□□ -0.61
SSX9-201ENST00000376909 FXR2P51116 673 aaKnown RBP eCLIP11.22□□□□□ -0.61
SSX9-201ENST00000376909 TONSLQ96HA7 1378 aa11.22□□□□□ -0.61
SSX9-201ENST00000376909 WASHC2CQ9Y4E1 1318 aa11.22□□□□□ -0.61
SSX9-201ENST00000376909 LMTK2Q8IWU2 1503 aa11.21□□□□□ -0.61
SSX9-201ENST00000376909 RPRD2Q5VT52 1461 aaKnown RBP11.2□□□□□ -0.62
SSX9-201ENST00000376909 TET3O43151 1660 aa11.19□□□□□ -0.62
SSX9-201ENST00000376909 ABCC3O15438 1527 aa11.19□□□□□ -0.62
SSX9-201ENST00000376909 ARID4BQ4LE39 1312 aaPredicted RBP11.18□□□□□ -0.62
SSX9-201ENST00000376909 PIP4P2Q8N4L2 257 aa11.18□□□□□ -0.62
SSX9-201ENST00000376909 PLA2R1Q13018 1463 aa11.18□□□□□ -0.62
SSX9-201ENST00000376909 CCDC144AA2RUR9 1427 aa11.18□□□□□ -0.62
SSX9-201ENST00000376909 PPP1R15AO75807 674 aaPredicted RBP11.17□□□□□ -0.62
SSX9-201ENST00000376909 MLECQ14165 292 aa11.17□□□□□ -0.62
SSX9-201ENST00000376909 EFCAB6Q5THR3 1501 aa11.17□□□□□ -0.62
SSX9-201ENST00000376909 PTPRTO14522 1441 aa11.17□□□□□ -0.62
SSX9-201ENST00000376909 PRR29P0C7W0 189 aa11.16□□□□□ -0.62
SSX9-201ENST00000376909 PROM2Q8N271 834 aa11.16□□□□□ -0.62
SSX9-201ENST00000376909 L3MBTL2Q969R5 705 aa11.16□□□□□ -0.62
SSX9-201ENST00000376909 E9PCH4 1651 aa11.15□□□□□ -0.62
SSX9-201ENST00000376909 ESF1Q9H501 851 aaKnown RBP11.15□□□□□ -0.62
SSX9-201ENST00000376909 NPATQ14207 1427 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms