RNA–Protein interactions for RNA: ENST00000376895.2

SSX3-203, Transcript of SSX family member 3, humanhuman

TSL 5

Gene SSX3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-203ENST00000376895 GOPCQ9HD26 462 aa10.1□□□□□ -0.79
SSX3-203ENST00000376895 TYW1BQ6NUM6 668 aa10.09□□□□□ -0.79
SSX3-203ENST00000376895 FBXW7Q969H0 707 aa10.09□□□□□ -0.79
SSX3-203ENST00000376895 PCDHGA4Q9Y5G9 962 aa10.09□□□□□ -0.79
SSX3-203ENST00000376895 PCDHGA10Q9Y5H3 936 aa10.09□□□□□ -0.79
SSX3-203ENST00000376895 CLCN1P35523 988 aa10.08□□□□□ -0.8
SSX3-203ENST00000376895 RBM33Q96EV2 1170 aaKnown RBP10.08□□□□□ -0.8
SSX3-203ENST00000376895 JPH4Q96JJ6 628 aa10.08□□□□□ -0.8
SSX3-203ENST00000376895 NPDC1Q9NQX5 325 aaPredicted RBP10.08□□□□□ -0.8
SSX3-203ENST00000376895 RSPH6AQ9H0K4 717 aa10.07□□□□□ -0.8
SSX3-203ENST00000376895 MS4A1P11836 297 aa10.06□□□□□ -0.8
SSX3-203ENST00000376895 GPCPD1Q9NPB8 672 aa10.06□□□□□ -0.8
SSX3-203ENST00000376895 FLIIQ13045 1269 aa10.05□□□□□ -0.8
SSX3-203ENST00000376895 TSR1Q2NL82 804 aaKnown RBP10.05□□□□□ -0.8
SSX3-203ENST00000376895 PCMTD1Q96MG8 357 aaPredicted RBP10.05□□□□□ -0.8
SSX3-203ENST00000376895 CERKQ8TCT0 537 aa10.04□□□□□ -0.8
SSX3-203ENST00000376895 REPIN1Q9BWE0 567 aaKnown RBP10.04□□□□□ -0.8
SSX3-203ENST00000376895 POTEIP0CG38 1075 aa10.03□□□□□ -0.8
SSX3-203ENST00000376895 MDM2Q00987 491 aaPredicted RBP10.03□□□□□ -0.8
SSX3-203ENST00000376895 DCAF1Q9Y4B6 1507 aa10.02□□□□□ -0.8
SSX3-203ENST00000376895 TMUB1Q9BVT8 246 aa10.02□□□□□ -0.81
SSX3-203ENST00000376895 SH3D19Q5HYK7 790 aa10.01□□□□□ -0.81
SSX3-203ENST00000376895 FOSBP53539 338 aa10□□□□□ -0.81
SSX3-203ENST00000376895 RBM27Q9P2N5 1060 aaKnown RBP10□□□□□ -0.81
SSX3-203ENST00000376895 KDM4FA0A1W2PPD8 638 aa9.99□□□□□ -0.81
SSX3-203ENST00000376895 OATP04181 439 aa9.99□□□□□ -0.81
SSX3-203ENST00000376895 NACADO15069 1562 aa9.99□□□□□ -0.81
SSX3-203ENST00000376895 MYO15BQ96JP2 1530 aa9.98□□□□□ -0.81
SSX3-203ENST00000376895 PADI6Q6TGC4 694 aa9.98□□□□□ -0.81
SSX3-203ENST00000376895 METTL3Q86U44 580 aaKnown RBP9.98□□□□□ -0.81
SSX3-203ENST00000376895 ZNF454Q8N9F8 522 aa9.98□□□□□ -0.81
SSX3-203ENST00000376895 ZDHHC16Q969W1 377 aa9.98□□□□□ -0.81
SSX3-203ENST00000376895 PHOX2BQ99453 314 aa9.98□□□□□ -0.81
SSX3-203ENST00000376895 SSTR3P32745 418 aaPredicted RBP9.97□□□□□ -0.81
SSX3-203ENST00000376895 C6orf132Q5T0Z8 1188 aa9.97□□□□□ -0.81
SSX3-203ENST00000376895 DOK7Q18PE1 504 aa9.96□□□□□ -0.82
SSX3-203ENST00000376895 RIMBP2O15034 1052 aa9.95□□□□□ -0.82
SSX3-203ENST00000376895 ONECUT3O60422 494 aaPredicted RBP9.95□□□□□ -0.82
SSX3-203ENST00000376895 PXYLP1Q8TE99 480 aa9.95□□□□□ -0.82
SSX3-203ENST00000376895 FAM217BQ9NTX9 383 aaPredicted RBP9.95□□□□□ -0.82
SSX3-203ENST00000376895 ADGRG1Q9Y653 693 aa9.95□□□□□ -0.82
SSX3-203ENST00000376895 RB1CC1Q8TDY2 1594 aa9.95□□□□□ -0.82
SSX3-203ENST00000376895 BEGAINQ9BUH8 593 aa9.94□□□□□ -0.82
SSX3-203ENST00000376895 NUDT7P0C024 238 aa9.93□□□□□ -0.82
SSX3-203ENST00000376895 SKIV2LQ15477 1246 aaKnown RBP9.93□□□□□ -0.82
SSX3-203ENST00000376895 FAM161AQ3B820 660 aa9.93□□□□□ -0.82
SSX3-203ENST00000376895 SP7Q8TDD2 431 aaPredicted RBP9.92□□□□□ -0.82
SSX3-203ENST00000376895 ZSWIM6Q9HCJ5 1215 aa9.92□□□□□ -0.82
SSX3-203ENST00000376895 TTC13Q8NBP0 860 aa9.91□□□□□ -0.82
SSX3-203ENST00000376895 NLRP7Q8WX94 980 aa9.91□□□□□ -0.82
SSX3-203ENST00000376895 ADAM33Q9BZ11 813 aa9.91□□□□□ -0.82
SSX3-203ENST00000376895 ATP1B4Q9UN42 357 aaPredicted RBP9.91□□□□□ -0.82
SSX3-203ENST00000376895 RBM46Q8TBY0 533 aaKnown RBP9.9□□□□□ -0.82
SSX3-203ENST00000376895 UBTFP17480 764 aaKnown RBP9.89□□□□□ -0.83
SSX3-203ENST00000376895 PRSS12P56730 875 aa9.89□□□□□ -0.83
SSX3-203ENST00000376895 MCM6Q14566 821 aa9.89□□□□□ -0.83
SSX3-203ENST00000376895 ARSIQ5FYB1 569 aa9.88□□□□□ -0.83
SSX3-203ENST00000376895 CDCA7LQ96GN5 454 aa9.88□□□□□ -0.83
SSX3-203ENST00000376895 A6NJR5 290 aa9.87□□□□□ -0.83
SSX3-203ENST00000376895 HOXB3P14651 431 aaPredicted RBP9.87□□□□□ -0.83
SSX3-203ENST00000376895 CLK2P49760 499 aaKnown RBP9.87□□□□□ -0.83
SSX3-203ENST00000376895 DIXDC1Q155Q3 683 aa9.87□□□□□ -0.83
SSX3-203ENST00000376895 KHSRPQ92945 711 aaKnown RBP eCLIP9.87□□□□□ -0.839e-8■□□□□ 8.2
SSX3-203ENST00000376895 PPP4R3BQ5MIZ7 849 aa9.86□□□□□ -0.83
SSX3-203ENST00000376895 MYSM1Q5VVJ2 828 aa9.86□□□□□ -0.83
SSX3-203ENST00000376895 ZNF710Q8N1W2 664 aa9.86□□□□□ -0.83
SSX3-203ENST00000376895 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.85□□□□□ -0.83
SSX3-203ENST00000376895 PSDA5PKW4 1024 aaPredicted RBP9.85□□□□□ -0.83
SSX3-203ENST00000376895 ARID3AQ99856 593 aa9.85□□□□□ -0.83
SSX3-203ENST00000376895 POLR3EQ9NVU0 708 aa9.85□□□□□ -0.83
SSX3-203ENST00000376895 GPR153Q6NV75 609 aa9.84□□□□□ -0.83
SSX3-203ENST00000376895 CLUAP1Q96AJ1 413 aa9.84□□□□□ -0.83
SSX3-203ENST00000376895 C1orf115Q9H7X2 142 aa9.84□□□□□ -0.83
SSX3-203ENST00000376895 ARID3CA6NKF2 412 aa9.83□□□□□ -0.84
SSX3-203ENST00000376895 APBB1O00213 710 aa9.83□□□□□ -0.84
SSX3-203ENST00000376895 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.83□□□□□ -0.84
SSX3-203ENST00000376895 SCUBE2Q9NQ36 999 aa9.83□□□□□ -0.84
SSX3-203ENST00000376895 PPP1R3GB7ZBB8 358 aa9.82□□□□□ -0.84
SSX3-203ENST00000376895 PROCA1Q8NCQ7 364 aaPredicted RBP9.82□□□□□ -0.84
SSX3-203ENST00000376895 TBC1D2Q9BYX2 928 aa9.82□□□□□ -0.84
SSX3-203ENST00000376895 BCL2L12Q9HB09 334 aa9.82□□□□□ -0.84
SSX3-203ENST00000376895 LHX6Q9UPM6 363 aa9.82□□□□□ -0.84
SSX3-203ENST00000376895 NBPF26B4DH59 902 aa9.81□□□□□ -0.84
SSX3-203ENST00000376895 RCCD1A6NED2 376 aa9.8□□□□□ -0.84
SSX3-203ENST00000376895 RAD21O60216 631 aa9.8□□□□□ -0.84
SSX3-203ENST00000376895 PTPREP23469 700 aa9.8□□□□□ -0.84
SSX3-203ENST00000376895 SULF1Q8IWU6 871 aa9.8□□□□□ -0.84
SSX3-203ENST00000376895 SPDYE5A6NIY4 337 aa9.79□□□□□ -0.84
SSX3-203ENST00000376895 TRAK2O60296 914 aa9.79□□□□□ -0.84
SSX3-203ENST00000376895 MAMSTRQ6ZN01 415 aa9.79□□□□□ -0.84
SSX3-203ENST00000376895 CD46P15529 392 aa9.78□□□□□ -0.84
SSX3-203ENST00000376895 COL9A1P20849 921 aa9.78□□□□□ -0.84
SSX3-203ENST00000376895 DNAJB2P25686 324 aa9.78□□□□□ -0.84
SSX3-203ENST00000376895 PROSER2Q86WR7 435 aaPredicted RBP9.78□□□□□ -0.84
SSX3-203ENST00000376895 EYA1Q99502 592 aa9.78□□□□□ -0.84
SSX3-203ENST00000376895 FAM198AQ9UFP1 575 aa9.78□□□□□ -0.84
SSX3-203ENST00000376895 SHROOM4Q9ULL8 1493 aa9.78□□□□□ -0.84
SSX3-203ENST00000376895 POTEJP0CG39 1038 aa9.77□□□□□ -0.85
SSX3-203ENST00000376895 RFC5P40937 340 aa9.77□□□□□ -0.85
SSX3-203ENST00000376895 TSKSQ9UJT2 592 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms